RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 LY6G6DO95868 133 aa7.18□□□□□ -1.26
CLSTN1-203ENST00000435891 RPL28P46779 137 aaKnown RBP7.18□□□□□ -1.26
CLSTN1-203ENST00000435891 DEFB135Q30KP9 77 aa7.18□□□□□ -1.26
CLSTN1-203ENST00000435891 SMIM11BQ8TCY0 68 aa7.18□□□□□ -1.26
CLSTN1-203ENST00000435891 FLNBO75369 2602 aaKnown RBP7.18□□□□□ -1.26
CLSTN1-203ENST00000435891 HAMPP81172 84 aa7.18□□□□□ -1.26
CLSTN1-203ENST00000435891 TEP1Q99973 2627 aaKnown RBP7.17□□□□□ -1.26
CLSTN1-203ENST00000435891 A0A087WYN8 130 aa7.17□□□□□ -1.26
CLSTN1-203ENST00000435891 TRAV13-2A0A0B4J235 113 aa7.17□□□□□ -1.26
CLSTN1-203ENST00000435891 LINC00474Q9P2X8 69 aa7.17□□□□□ -1.26
CLSTN1-203ENST00000435891 C6orf226Q5I0X4 101 aa7.17□□□□□ -1.26
CLSTN1-203ENST00000435891 PRO0255Q9UI72 69 aa7.17□□□□□ -1.26
CLSTN1-203ENST00000435891 SMIM26A0A096LP01 95 aa7.17□□□□□ -1.26
CLSTN1-203ENST00000435891 IBA57-AS1B1ANH7 110 aa7.17□□□□□ -1.26
CLSTN1-203ENST00000435891 PAX4O43316 350 aa7.16□□□□□ -1.26
CLSTN1-203ENST00000435891 IGLV10-54A0A075B6I4 117 aa7.16□□□□□ -1.26
CLSTN1-203ENST00000435891 F8WEM9 126 aa7.16□□□□□ -1.26
CLSTN1-203ENST00000435891 RMI2Q96E14 147 aa7.16□□□□□ -1.26
CLSTN1-203ENST00000435891 UBL5Q9BZL1 73 aa7.16□□□□□ -1.26
CLSTN1-203ENST00000435891 LINC00269Q8N2A0 174 aa7.15□□□□□ -1.26
CLSTN1-203ENST00000435891 A0A1B0GUV1 79 aa7.15□□□□□ -1.26
CLSTN1-203ENST00000435891 INAFM1C9JVW0 142 aa7.15□□□□□ -1.26
CLSTN1-203ENST00000435891 PRR3P79522 188 aaKnown RBP7.15□□□□□ -1.26
CLSTN1-203ENST00000435891 CELA1Q9UNI1 258 aa7.15□□□□□ -1.27
CLSTN1-203ENST00000435891 SS18Q15532 418 aa7.14□□□□□ -1.27
CLSTN1-203ENST00000435891 PKD1L1Q8TDX9 2849 aa7.14□□□□□ -1.27
CLSTN1-203ENST00000435891 IGHV4-28A0A0C4DH34 117 aa7.13□□□□□ -1.27
CLSTN1-203ENST00000435891 NDUFC2-KCTD14E9PQ53 114 aa7.13□□□□□ -1.27
CLSTN1-203ENST00000435891 C9orf116Q5BN46 136 aaPredicted RBP7.13□□□□□ -1.27
CLSTN1-203ENST00000435891 KIAA0087Q14695 138 aa7.12□□□□□ -1.27
CLSTN1-203ENST00000435891 ORMDL1Q9P0S3 153 aa7.12□□□□□ -1.27
CLSTN1-203ENST00000435891 Q8IZM0 81 aa7.12□□□□□ -1.27
CLSTN1-203ENST00000435891 ANGP03950 147 aaKnown RBP7.11□□□□□ -1.27
CLSTN1-203ENST00000435891 C9orf66Q5T8R8 295 aa7.11□□□□□ -1.27
CLSTN1-203ENST00000435891 CHCHD10Q8WYQ3 142 aaPredicted RBP7.11□□□□□ -1.27
CLSTN1-203ENST00000435891 TRBV7-6A0A0J9YX20 115 aa7.11□□□□□ -1.27
CLSTN1-203ENST00000435891 LYRM9A8MSI8 78 aa7.11□□□□□ -1.27
CLSTN1-203ENST00000435891 Q8NDZ9 215 aa7.11□□□□□ -1.27
CLSTN1-203ENST00000435891 HTN3P15516 51 aa7.1□□□□□ -1.27
CLSTN1-203ENST00000435891 NANOS2P60321 138 aaKnown RBP7.1□□□□□ -1.27
CLSTN1-203ENST00000435891 H7BZZ5 65 aa7.1□□□□□ -1.27
CLSTN1-203ENST00000435891 DAD1P61803 113 aa7.1□□□□□ -1.27
CLSTN1-203ENST00000435891 REG3AQ06141 175 aa7.1□□□□□ -1.27
CLSTN1-203ENST00000435891 ANK2Q01484 3957 aa7.1□□□□□ -1.27
CLSTN1-203ENST00000435891 CD164L2Q6UWJ8 174 aa7.09□□□□□ -1.27
CLSTN1-203ENST00000435891 Q8NAQ8 132 aa7.09□□□□□ -1.27
CLSTN1-203ENST00000435891 H0YGX0 51 aa7.09□□□□□ -1.27
CLSTN1-203ENST00000435891 FP248Q71RG6 208 aaPredicted RBP7.09□□□□□ -1.27
CLSTN1-203ENST00000435891 C6orf223Q8N319 242 aa7.08□□□□□ -1.28
CLSTN1-203ENST00000435891 CCKP06307 115 aa7.08□□□□□ -1.28
CLSTN1-203ENST00000435891 C10orf25Q5T742 122 aa7.08□□□□□ -1.28
CLSTN1-203ENST00000435891 SCXQ7RTU7 201 aa7.08□□□□□ -1.28
CLSTN1-203ENST00000435891 LAMTOR3Q9UHA4 124 aa7.08□□□□□ -1.28
CLSTN1-203ENST00000435891 RETNQ9HD89 108 aa7.07□□□□□ -1.28
CLSTN1-203ENST00000435891 LRCOL1A6NCL2 159 aa7.07□□□□□ -1.28
CLSTN1-203ENST00000435891 TRAV7A0A075B6U4 112 aa7.06□□□□□ -1.28
CLSTN1-203ENST00000435891 APOC4P55056 127 aa7.06□□□□□ -1.28
CLSTN1-203ENST00000435891 TENM3Q9P273 2699 aa7.05□□□□□ -1.28
CLSTN1-203ENST00000435891 LYPD5Q6UWN5 251 aa7.05□□□□□ -1.28
CLSTN1-203ENST00000435891 UNQ6190/PRO20217Q6UXQ8 127 aa7.05□□□□□ -1.28
CLSTN1-203ENST00000435891 TRAV10A0A0B4J240 114 aa7.05□□□□□ -1.28
CLSTN1-203ENST00000435891 IGHV4-30-4P0DP06 118 aa7.05□□□□□ -1.28
CLSTN1-203ENST00000435891 OBSCN-AS1Q96MR7 158 aa7.04□□□□□ -1.28
CLSTN1-203ENST00000435891 KLK12Q9UKR0 248 aa7.04□□□□□ -1.28
CLSTN1-203ENST00000435891 PRB2P02812 416 aaPredicted RBP7.04□□□□□ -1.28
CLSTN1-203ENST00000435891 ATP5EP2Q5VTU8 51 aa7.04□□□□□ -1.28
CLSTN1-203ENST00000435891 JMJD7-PLA2G4BH0Y9G9 81 aa7.03□□□□□ -1.28
CLSTN1-203ENST00000435891 MIFP14174 115 aa7.03□□□□□ -1.28
CLSTN1-203ENST00000435891 SPART-AS1P0CW21 52 aa7.03□□□□□ -1.28
CLSTN1-203ENST00000435891 COX17Q14061 63 aa7.02□□□□□ -1.29
CLSTN1-203ENST00000435891 STAB1Q9NY15 2570 aa7.02□□□□□ -1.29
CLSTN1-203ENST00000435891 SPAG11BQ08648 103 aa7.02□□□□□ -1.29
CLSTN1-203ENST00000435891 PMAIP1Q13794 54 aa7.02□□□□□ -1.29
CLSTN1-203ENST00000435891 C6orf99Q4VX62 202 aa7.02□□□□□ -1.29
CLSTN1-203ENST00000435891 LELP1Q5T871 98 aa7.02□□□□□ -1.29
CLSTN1-203ENST00000435891 CYSRT1A8MQ03 144 aa7.01□□□□□ -1.29
CLSTN1-203ENST00000435891 Q8N814 137 aa7.01□□□□□ -1.29
CLSTN1-203ENST00000435891 PRR34Q9NV39 138 aa7□□□□□ -1.29
CLSTN1-203ENST00000435891 F8P00451 2351 aa7□□□□□ -1.29
CLSTN1-203ENST00000435891 OXLD1Q5BKU9 147 aa7□□□□□ -1.29
CLSTN1-203ENST00000435891 FBN1P35555 2871 aaKnown RBP7□□□□□ -1.29
CLSTN1-203ENST00000435891 LINC00167Q96N53 147 aa6.99□□□□□ -1.29
CLSTN1-203ENST00000435891 TM2D3Q9BRN9 247 aa6.99□□□□□ -1.29
CLSTN1-203ENST00000435891 TMEM256-PLSCR3K7ERE1 68 aa6.99□□□□□ -1.29
CLSTN1-203ENST00000435891 XAGE1AQ9HD64 81 aa6.98□□□□□ -1.29
CLSTN1-203ENST00000435891 WFDC10BQ8IUB3 73 aa6.98□□□□□ -1.29
CLSTN1-203ENST00000435891 LINC01547P58512 204 aaPredicted RBP6.97□□□□□ -1.29
CLSTN1-203ENST00000435891 KLKP1Q107X0 134 aa6.97□□□□□ -1.29
CLSTN1-203ENST00000435891 NOTCH1P46531 2555 aa6.97□□□□□ -1.29
CLSTN1-203ENST00000435891 A0A0J9YWU9 116 aa6.97□□□□□ -1.29
CLSTN1-203ENST00000435891 FAM229BQ4G0N7 80 aa6.97□□□□□ -1.29
CLSTN1-203ENST00000435891 MAST4O15021 2626 aa6.97□□□□□ -1.29
CLSTN1-203ENST00000435891 FUSP35637 526 aaKnown RBP eCLIP6.97□□□□□ -1.29
CLSTN1-203ENST00000435891 C6orf48Q9UBA6 75 aa6.97□□□□□ -1.29
CLSTN1-203ENST00000435891 CMYA5Q8N3K9 4069 aa6.96□□□□□ -1.29
CLSTN1-203ENST00000435891 KRTAP10-11P60412 298 aa6.96□□□□□ -1.29
CLSTN1-203ENST00000435891 PSPHP1O15172 72 aa6.96□□□□□ -1.3
CLSTN1-203ENST00000435891 NDUFC1O43677 76 aa6.96□□□□□ -1.3
CLSTN1-203ENST00000435891 HIGD2BQ4VC39 106 aa6.96□□□□□ -1.3
CLSTN1-203ENST00000435891 LINC00575Q6W349 94 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms