RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 KIAA0087Q14695 138 aa7.89□□□□□ -1.15
HMGCS1-202ENST00000433297 MIFP14174 115 aa7.89□□□□□ -1.15
HMGCS1-202ENST00000433297 BBC3Q96PG8 261 aaPredicted RBP7.89□□□□□ -1.15
HMGCS1-202ENST00000433297 DOPEY1Q5JWR5 2465 aa7.89□□□□□ -1.15
HMGCS1-202ENST00000433297 DAD1P61803 113 aa7.88□□□□□ -1.15
HMGCS1-202ENST00000433297 GCN1Q92616 2671 aaKnown RBP7.88□□□□□ -1.15
HMGCS1-202ENST00000433297 LOC110117498A0A087WWA1 95 aa7.88□□□□□ -1.15
HMGCS1-202ENST00000433297 MUC7Q8TAX7 377 aa7.88□□□□□ -1.15
HMGCS1-202ENST00000433297 XAGE1AQ9HD64 81 aa7.88□□□□□ -1.15
HMGCS1-202ENST00000433297 IGHV4-31P0DP07 118 aa7.88□□□□□ -1.15
HMGCS1-202ENST00000433297 APCP25054 2843 aa7.87□□□□□ -1.15
HMGCS1-202ENST00000433297 COX17Q14061 63 aa7.87□□□□□ -1.15
HMGCS1-202ENST00000433297 CD164L2Q6UWJ8 174 aa7.87□□□□□ -1.15
HMGCS1-202ENST00000433297 NREPQ16612 68 aa7.87□□□□□ -1.15
HMGCS1-202ENST00000433297 DEFB4AO15263 64 aa7.87□□□□□ -1.15
HMGCS1-202ENST00000433297 REG3AQ06141 175 aa7.87□□□□□ -1.15
HMGCS1-202ENST00000433297 C16orf95Q9H693 158 aa7.87□□□□□ -1.15
HMGCS1-202ENST00000433297 EPM2AB3EWF7 344 aa7.86□□□□□ -1.15
HMGCS1-202ENST00000433297 A0A1B0GUV1 79 aa7.86□□□□□ -1.15
HMGCS1-202ENST00000433297 BPY2O14599 106 aa7.86□□□□□ -1.15
HMGCS1-202ENST00000433297 CXCL6P80162 114 aa7.86□□□□□ -1.15
HMGCS1-202ENST00000433297 SPAG11BQ08648 103 aa7.85□□□□□ -1.15
HMGCS1-202ENST00000433297 CSNK1G2-AS1Q8NCQ2 148 aa7.85□□□□□ -1.15
HMGCS1-202ENST00000433297 TMEM254Q8TBM7 123 aa7.85□□□□□ -1.15
HMGCS1-202ENST00000433297 CR1P17927 2039 aa7.85□□□□□ -1.15
HMGCS1-202ENST00000433297 BCE1O60756 84 aa7.85□□□□□ -1.15
HMGCS1-202ENST00000433297 CYSRT1A8MQ03 144 aa7.84□□□□□ -1.15
HMGCS1-202ENST00000433297 FAM229BQ4G0N7 80 aa7.84□□□□□ -1.15
HMGCS1-202ENST00000433297 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.84□□□□□ -1.15
HMGCS1-202ENST00000433297 PKD1L2Q7Z442 2459 aa7.83□□□□□ -1.16
HMGCS1-202ENST00000433297 PDE6GP18545 87 aa7.83□□□□□ -1.16
HMGCS1-202ENST00000433297 DIRC1Q969H9 104 aa7.83□□□□□ -1.16
HMGCS1-202ENST00000433297 PRO0255Q9UI72 69 aa7.83□□□□□ -1.16
HMGCS1-202ENST00000433297 TRBV7-4A0A0J9YYF1 115 aa7.83□□□□□ -1.16
HMGCS1-202ENST00000433297 FSHBP01225 129 aa7.83□□□□□ -1.16
HMGCS1-202ENST00000433297 NDUFC1O43677 76 aa7.82□□□□□ -1.16
HMGCS1-202ENST00000433297 LRCOL1A6NCL2 159 aa7.82□□□□□ -1.16
HMGCS1-202ENST00000433297 HTN3P15516 51 aa7.81□□□□□ -1.16
HMGCS1-202ENST00000433297 IGHV4-28A0A0C4DH34 117 aa7.81□□□□□ -1.16
HMGCS1-202ENST00000433297 C3orf84H3BNL1 204 aa7.8□□□□□ -1.16
HMGCS1-202ENST00000433297 CMC4P56277 68 aaPredicted RBP7.8□□□□□ -1.16
HMGCS1-202ENST00000433297 IGLV6-57P01721 117 aa7.8□□□□□ -1.16
HMGCS1-202ENST00000433297 COX7BP24311 80 aa7.8□□□□□ -1.16
HMGCS1-202ENST00000433297 C19orf73Q9NVV2 129 aa7.8□□□□□ -1.16
HMGCS1-202ENST00000433297 MTORP42345 2549 aa7.8□□□□□ -1.16
HMGCS1-202ENST00000433297 ZNF73O43830 326 aaPredicted RBP7.8□□□□□ -1.16
HMGCS1-202ENST00000433297 C9orf66Q5T8R8 295 aa7.79□□□□□ -1.16
HMGCS1-202ENST00000433297 KLK12Q9UKR0 248 aa7.79□□□□□ -1.16
HMGCS1-202ENST00000433297 DNAJC9-AS1A6NH13 148 aa7.79□□□□□ -1.16
HMGCS1-202ENST00000433297 KRTAP10-9P60411 292 aa7.79□□□□□ -1.16
HMGCS1-202ENST00000433297 HIGD2AQ9BW72 106 aa7.79□□□□□ -1.16
HMGCS1-202ENST00000433297 DEFB105AQ8NG35 78 aa7.79□□□□□ -1.16
HMGCS1-202ENST00000433297 FUSP35637 526 aaKnown RBP eCLIP7.78□□□□□ -1.169e-7■□□□□ 8.8
HMGCS1-202ENST00000433297 C1orf195Q5TG92 126 aa7.78□□□□□ -1.16
HMGCS1-202ENST00000433297 CELA1Q9UNI1 258 aa7.77□□□□□ -1.16
HMGCS1-202ENST00000433297 PIEZO1Q92508 2521 aa7.77□□□□□ -1.16
HMGCS1-202ENST00000433297 IGLV1-51P01701 117 aa7.77□□□□□ -1.17
HMGCS1-202ENST00000433297 PRYO14603 147 aa7.77□□□□□ -1.17
HMGCS1-202ENST00000433297 ATP5EP56381 51 aaPredicted RBP7.76□□□□□ -1.17
HMGCS1-202ENST00000433297 HIGD2BQ4VC39 106 aa7.76□□□□□ -1.17
HMGCS1-202ENST00000433297 FAM30AQ9NZY2 134 aa7.75□□□□□ -1.17
HMGCS1-202ENST00000433297 PRB2P02812 416 aaPredicted RBP7.74□□□□□ -1.17
HMGCS1-202ENST00000433297 ACANP16112 2415 aa7.74□□□□□ -1.17
HMGCS1-202ENST00000433297 ZNF469Q96JG9 3925 aaPredicted RBP7.74□□□□□ -1.17
HMGCS1-202ENST00000433297 C6orf48Q9UBA6 75 aa7.74□□□□□ -1.17
HMGCS1-202ENST00000433297 ESRGQ1W209 222 aa7.73□□□□□ -1.17
HMGCS1-202ENST00000433297 IGKV4-1P06312 121 aa7.73□□□□□ -1.17
HMGCS1-202ENST00000433297 H3BQ85 93 aa7.73□□□□□ -1.17
HMGCS1-202ENST00000433297 DEFB135Q30KP9 77 aa7.73□□□□□ -1.17
HMGCS1-202ENST00000433297 V9GYY9 64 aa7.73□□□□□ -1.17
HMGCS1-202ENST00000433297 A0A0J9YWU9 116 aa7.72□□□□□ -1.17
HMGCS1-202ENST00000433297 IGHV4-30-4P0DP06 118 aa7.72□□□□□ -1.17
HMGCS1-202ENST00000433297 ELOF1P60002 83 aaKnown RBP7.72□□□□□ -1.17
HMGCS1-202ENST00000433297 X6R8D5 127 aa7.72□□□□□ -1.17
HMGCS1-202ENST00000433297 IGSF10Q6WRI0 2623 aa7.71□□□□□ -1.18
HMGCS1-202ENST00000433297 CAMK2N2Q96S95 79 aa7.71□□□□□ -1.18
HMGCS1-202ENST00000433297 OCR1Q9BZK8 76 aa7.71□□□□□ -1.18
HMGCS1-202ENST00000433297 ZNF462Q96JM2 2506 aa7.71□□□□□ -1.18
HMGCS1-202ENST00000433297 PRR4Q16378 134 aa7.71□□□□□ -1.18
HMGCS1-202ENST00000433297 HIVEP2P31629 2446 aa7.7□□□□□ -1.18
HMGCS1-202ENST00000433297 DEFB113Q30KQ7 82 aa7.69□□□□□ -1.18
HMGCS1-202ENST00000433297 SMIM29Q86T20 159 aa7.69□□□□□ -1.18
HMGCS1-202ENST00000433297 LINC00612Q8N6U2 182 aa7.69□□□□□ -1.18
HMGCS1-202ENST00000433297 Q6ZTC4 211 aa7.69□□□□□ -1.18
HMGCS1-202ENST00000433297 FLNAP21333 2647 aaKnown RBP7.68□□□□□ -1.18
HMGCS1-202ENST00000433297 ITPR3Q14573 2671 aa7.68□□□□□ -1.18
HMGCS1-202ENST00000433297 ERC2-IT1O76042 136 aa7.67□□□□□ -1.18
HMGCS1-202ENST00000433297 F8WDY8 70 aa7.66□□□□□ -1.18
HMGCS1-202ENST00000433297 SEC61GP60059 68 aa7.66□□□□□ -1.18
HMGCS1-202ENST00000433297 PSPHP1O15172 72 aa7.66□□□□□ -1.18
HMGCS1-202ENST00000433297 VPREB1P12018 145 aa7.66□□□□□ -1.18
HMGCS1-202ENST00000433297 M0R378 163 aa7.65□□□□□ -1.18
HMGCS1-202ENST00000433297 LINC00528Q8N1L1 170 aa7.65□□□□□ -1.18
HMGCS1-202ENST00000433297 LYRM9A8MSI8 78 aa7.65□□□□□ -1.19
HMGCS1-202ENST00000433297 Q6ZRU5 148 aa7.64□□□□□ -1.19
HMGCS1-202ENST00000433297 LELP1Q5T871 98 aa7.64□□□□□ -1.19
HMGCS1-202ENST00000433297 C1orf64Q8NEQ6 169 aa7.62□□□□□ -1.19
HMGCS1-202ENST00000433297 GVQW2A0A096LPI5 108 aaPredicted RBP7.62□□□□□ -1.19
HMGCS1-202ENST00000433297 KPRPQ5T749 579 aaPredicted RBP7.62□□□□□ -1.19
HMGCS1-202ENST00000433297 PRR34Q9NV39 138 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms