RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 HIGD2AQ9BW72 106 aa8.22□□□□□ -1.09
SMARCE1-205ENST00000431889 MUC17Q685J3 4493 aa8.22□□□□□ -1.09
SMARCE1-205ENST00000431889 FAM229BQ4G0N7 80 aa8.22□□□□□ -1.09
SMARCE1-205ENST00000431889 BAGE3Q86Y29 109 aa8.22□□□□□ -1.09
SMARCE1-205ENST00000431889 CBLN2Q8IUK8 224 aa8.22□□□□□ -1.09
SMARCE1-205ENST00000431889 C18orf32Q8TCD1 76 aa8.22□□□□□ -1.09
SMARCE1-205ENST00000431889 PLEKHB2Q96CS7 222 aa8.22□□□□□ -1.09
SMARCE1-205ENST00000431889 CDIP1Q9H305 208 aa8.22□□□□□ -1.09
SMARCE1-205ENST00000431889 TRAPPC1Q9Y5R8 145 aa8.22□□□□□ -1.09
SMARCE1-205ENST00000431889 LINC01549A6NIU2 74 aa8.21□□□□□ -1.1
SMARCE1-205ENST00000431889 LINC00614P0C842 121 aa8.21□□□□□ -1.1
SMARCE1-205ENST00000431889 LINC00158P58513 81 aa8.21□□□□□ -1.1
SMARCE1-205ENST00000431889 IGLV7-46A0A075B6I9 117 aa8.2□□□□□ -1.1
SMARCE1-205ENST00000431889 HBDP02042 147 aa8.2□□□□□ -1.1
SMARCE1-205ENST00000431889 LORP23490 312 aaPredicted RBP8.2□□□□□ -1.1
SMARCE1-205ENST00000431889 KRTAP9-2Q9BYQ4 174 aa8.2□□□□□ -1.1
SMARCE1-205ENST00000431889 A0A0U1RQV1 116 aa8.19□□□□□ -1.1
SMARCE1-205ENST00000431889 RPL24P83731 157 aaKnown RBP8.19□□□□□ -1.1
SMARCE1-205ENST00000431889 NCR3O14931 201 aa8.18□□□□□ -1.1
SMARCE1-205ENST00000431889 COX19Q49B96 90 aa8.18□□□□□ -1.1
SMARCE1-205ENST00000431889 DAND5Q8N907 189 aa8.18□□□□□ -1.1
SMARCE1-205ENST00000431889 PPDPFQ9H3Y8 114 aa8.17□□□□□ -1.1
SMARCE1-205ENST00000431889 CHTOPQ9Y3Y2 248 aaKnown RBP8.17□□□□□ -1.1
SMARCE1-205ENST00000431889 SMIM13P0DJ93 91 aa8.16□□□□□ -1.1
SMARCE1-205ENST00000431889 COX17Q14061 63 aa8.16□□□□□ -1.1
SMARCE1-205ENST00000431889 RHEBQ15382 184 aa8.15□□□□□ -1.1
SMARCE1-205ENST00000431889 C10orf91Q5T1B1 145 aa8.15□□□□□ -1.1
SMARCE1-205ENST00000431889 SPRR4Q96PI1 79 aa8.14□□□□□ -1.11
SMARCE1-205ENST00000431889 TMEM223A0PJW6 202 aa8.14□□□□□ -1.11
SMARCE1-205ENST00000431889 TPRXLQ17RH7 258 aa8.14□□□□□ -1.11
SMARCE1-205ENST00000431889 BOD1L2Q8IYS8 172 aa8.13□□□□□ -1.11
SMARCE1-205ENST00000431889 H0Y8G0 127 aa8.12□□□□□ -1.11
SMARCE1-205ENST00000431889 MEIG1Q5JSS6 88 aa8.12□□□□□ -1.11
SMARCE1-205ENST00000431889 APOC3P02656 99 aa8.11□□□□□ -1.11
SMARCE1-205ENST00000431889 XP32Q5T750 250 aa8.11□□□□□ -1.11
SMARCE1-205ENST00000431889 MIR7-3HGQ8N6C7 128 aa8.11□□□□□ -1.11
SMARCE1-205ENST00000431889 Q8NBF4 154 aa8.11□□□□□ -1.11
SMARCE1-205ENST00000431889 ATP6V1G1O75348 118 aa8.1□□□□□ -1.11
SMARCE1-205ENST00000431889 SMCR5Q8TEV8 140 aa8.1□□□□□ -1.11
SMARCE1-205ENST00000431889 FAM19A2Q8N3H0 131 aa8.1□□□□□ -1.11
SMARCE1-205ENST00000431889 IFI27L1Q96BM0 104 aa8.1□□□□□ -1.11
SMARCE1-205ENST00000431889 C4orf48Q5BLP8 95 aa8.09□□□□□ -1.11
SMARCE1-205ENST00000431889 TRBV10-3A0A0K0K1G6 114 aa8.07□□□□□ -1.12
SMARCE1-205ENST00000431889 PRYO14603 147 aa8.07□□□□□ -1.12
SMARCE1-205ENST00000431889 IGLV9-49A0A0B4J1Y8 123 aa8.06□□□□□ -1.12
SMARCE1-205ENST00000431889 ETDCA0A1B0GVM5 59 aa8.06□□□□□ -1.12
SMARCE1-205ENST00000431889 ERC2-IT1O76042 136 aa8.06□□□□□ -1.12
SMARCE1-205ENST00000431889 TSPEAR-AS2P59090 65 aa8.06□□□□□ -1.12
SMARCE1-205ENST00000431889 GAGE2AQ6NT46 116 aa8.06□□□□□ -1.12
SMARCE1-205ENST00000431889 SFTA2Q6UW10 78 aa8.06□□□□□ -1.12
SMARCE1-205ENST00000431889 TRAV12-1A0A0B4J245 112 aa8.05□□□□□ -1.12
SMARCE1-205ENST00000431889 SPAG11AQ6PDA7 123 aa8.05□□□□□ -1.12
SMARCE1-205ENST00000431889 KRTAP4-8Q9BYQ9 185 aa8.05□□□□□ -1.12
SMARCE1-205ENST00000431889 NDUFA12Q9UI09 145 aa8.05□□□□□ -1.12
SMARCE1-205ENST00000431889 ZNF706Q9Y5V0 76 aaPredicted RBP8.05□□□□□ -1.12
SMARCE1-205ENST00000431889 KRTAP4-16G5E9R7 235 aaPredicted RBP8.04□□□□□ -1.12
SMARCE1-205ENST00000431889 SPRR1AP35321 89 aa8.04□□□□□ -1.12
SMARCE1-205ENST00000431889 MOBPQ13875 183 aa8.04□□□□□ -1.12
SMARCE1-205ENST00000431889 LINC00337Q8N6G1 96 aa8.04□□□□□ -1.12
SMARCE1-205ENST00000431889 KRTAP4-1Q9BYQ7 146 aa8.04□□□□□ -1.12
SMARCE1-205ENST00000431889 KCNQ1DNQ9H478 68 aa8.04□□□□□ -1.12
SMARCE1-205ENST00000431889 KRTAP13-3Q3SY46 172 aa8.03□□□□□ -1.12
SMARCE1-205ENST00000431889 CHCHD1Q96BP2 118 aaKnown RBP8.03□□□□□ -1.12
SMARCE1-205ENST00000431889 YPEL4Q96NS1 127 aa8.03□□□□□ -1.12
SMARCE1-205ENST00000431889 PMCHL2Q9BQD1 86 aa8.03□□□□□ -1.12
SMARCE1-205ENST00000431889 SNAPINO95295 136 aa8.01□□□□□ -1.13
SMARCE1-205ENST00000431889 B5MCH6 92 aa8.01□□□□□ -1.13
SMARCE1-205ENST00000431889 HSBP1O75506 76 aa8.01□□□□□ -1.13
SMARCE1-205ENST00000431889 NPC2P61916 151 aa8.01□□□□□ -1.13
SMARCE1-205ENST00000431889 HERV-K104P63124 156 aa8.01□□□□□ -1.13
SMARCE1-205ENST00000431889 SVBPQ8N300 66 aa8.01□□□□□ -1.13
SMARCE1-205ENST00000431889 MYMXA0A1B0GTQ4 84 aa8□□□□□ -1.13
SMARCE1-205ENST00000431889 Q9BRP9 147 aa8□□□□□ -1.13
SMARCE1-205ENST00000431889 DDTP30046 118 aa7.99□□□□□ -1.13
SMARCE1-205ENST00000431889 FP248Q71RG6 208 aaPredicted RBP7.99□□□□□ -1.13
SMARCE1-205ENST00000431889 NDUFA5Q16718 116 aa7.98□□□□□ -1.13
SMARCE1-205ENST00000431889 LINC00483Q53H64 154 aa7.98□□□□□ -1.13
SMARCE1-205ENST00000431889 EIF4EBP3O60516 100 aaPredicted RBP7.97□□□□□ -1.13
SMARCE1-205ENST00000431889 FABP4P15090 132 aa7.97□□□□□ -1.13
SMARCE1-205ENST00000431889 LINC00310P59036 64 aa7.97□□□□□ -1.13
SMARCE1-205ENST00000431889 CTAG1AP78358 180 aa7.97□□□□□ -1.13
SMARCE1-205ENST00000431889 KRTAP9-6A0A140TA67 174 aa7.97□□□□□ -1.13
SMARCE1-205ENST00000431889 LEPROTO15243 131 aa7.97□□□□□ -1.13
SMARCE1-205ENST00000431889 SPINK1P00995 79 aa7.97□□□□□ -1.13
SMARCE1-205ENST00000431889 TRGC2P03986 189 aa7.97□□□□□ -1.13
SMARCE1-205ENST00000431889 Q8N377 158 aa7.97□□□□□ -1.13
SMARCE1-205ENST00000431889 MAP1LC3CQ9BXW4 147 aa7.97□□□□□ -1.13
SMARCE1-205ENST00000431889 SERF1AO75920 110 aa7.96□□□□□ -1.14
SMARCE1-205ENST00000431889 ST20-AS1Q8NBB2 130 aa7.96□□□□□ -1.14
SMARCE1-205ENST00000431889 LEPROTL1O95214 131 aa7.95□□□□□ -1.14
SMARCE1-205ENST00000431889 ASB16-AS1Q495Z4 193 aa7.95□□□□□ -1.14
SMARCE1-205ENST00000431889 C9orf153Q5TBE3 101 aa7.95□□□□□ -1.14
SMARCE1-205ENST00000431889 J3QQQ9 107 aa7.94□□□□□ -1.14
SMARCE1-205ENST00000431889 S100A12P80511 92 aa7.94□□□□□ -1.14
SMARCE1-205ENST00000431889 S100A7L2Q5SY68 101 aa7.94□□□□□ -1.14
SMARCE1-205ENST00000431889 SOSTDC1Q6X4U4 206 aa7.94□□□□□ -1.14
SMARCE1-205ENST00000431889 LINC00587B1AMM8 73 aa7.93□□□□□ -1.14
SMARCE1-205ENST00000431889 Q6ZRX8 168 aa7.93□□□□□ -1.14
SMARCE1-205ENST00000431889 MIEN1Q9BRT3 115 aa7.93□□□□□ -1.14
SMARCE1-205ENST00000431889 LGALS3P17931 250 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 289.2 ms