RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 PIEZO1Q92508 2521 aa11.59□□□□□ -0.55
RIF1-204ENST00000430328 ERC2-IT1O76042 136 aa11.59□□□□□ -0.55
RIF1-204ENST00000430328 LINC00310P59036 64 aa11.59□□□□□ -0.55
RIF1-204ENST00000430328 NAV2Q8IVL1 2488 aa11.58□□□□□ -0.56
RIF1-204ENST00000430328 C9orf129Q5T035 196 aaKnown RBP11.58□□□□□ -0.56
RIF1-204ENST00000430328 Q8NA96 180 aa11.56□□□□□ -0.56
RIF1-204ENST00000430328 ABCA12Q86UK0 2595 aa11.56□□□□□ -0.56
RIF1-204ENST00000430328 LYPD5Q6UWN5 251 aa11.56□□□□□ -0.56
RIF1-204ENST00000430328 Q6ZQT0 140 aa11.55□□□□□ -0.56
RIF1-204ENST00000430328 BRI3O95415 125 aa11.55□□□□□ -0.56
RIF1-204ENST00000430328 LOC110117498A0A087WWA1 95 aa11.54□□□□□ -0.56
RIF1-204ENST00000430328 Q8NBF4 154 aa11.54□□□□□ -0.56
RIF1-204ENST00000430328 Q96NJ1 140 aa11.53□□□□□ -0.56
RIF1-204ENST00000430328 ODF3L2Q3SX64 289 aa11.53□□□□□ -0.56
RIF1-204ENST00000430328 LINC00476Q8WZB0 136 aa11.53□□□□□ -0.56
RIF1-204ENST00000430328 SETD2Q9BYW2 2564 aaPredicted RBP11.52□□□□□ -0.57
RIF1-204ENST00000430328 C19orf84I3L1E1 186 aa11.52□□□□□ -0.57
RIF1-204ENST00000430328 FAM19A4Q96LR4 140 aa11.52□□□□□ -0.57
RIF1-204ENST00000430328 WDR87Q6ZQQ6 2873 aa11.52□□□□□ -0.57
RIF1-204ENST00000430328 ELOF1P60002 83 aaKnown RBP11.51□□□□□ -0.57
RIF1-204ENST00000430328 TYMSOSQ8TAI1 123 aa11.51□□□□□ -0.57
RIF1-204ENST00000430328 JMJD1CQ15652 2540 aa11.51□□□□□ -0.57
RIF1-204ENST00000430328 PIEZO2Q9H5I5 2752 aa11.5□□□□□ -0.57
RIF1-204ENST00000430328 FAM229AH3BQW9 127 aa11.5□□□□□ -0.57
RIF1-204ENST00000430328 C11orf71Q6IPW1 123 aa11.5□□□□□ -0.57
RIF1-204ENST00000430328 CDC42SE1Q9NRR8 79 aa11.5□□□□□ -0.57
RIF1-204ENST00000430328 LINC00167Q96N53 147 aa11.49□□□□□ -0.57
RIF1-204ENST00000430328 IGLV1-51P01701 117 aa11.48□□□□□ -0.57
RIF1-204ENST00000430328 EDN2P20800 178 aa11.48□□□□□ -0.57
RIF1-204ENST00000430328 RPL37AP61513 92 aaKnown RBP11.47□□□□□ -0.57
RIF1-204ENST00000430328 Q6ZSN1 163 aa11.47□□□□□ -0.57
RIF1-204ENST00000430328 TRBV7-4A0A0J9YYF1 115 aa11.47□□□□□ -0.57
RIF1-204ENST00000430328 POLQO75417 2590 aa11.45□□□□□ -0.58
RIF1-204ENST00000430328 COL27A1Q8IZC6 1860 aaPredicted RBP11.45□□□□□ -0.58
RIF1-204ENST00000430328 A8MWP4 228 aa11.45□□□□□ -0.58
RIF1-204ENST00000430328 NHLRC4P0CG21 123 aaPredicted RBP11.45□□□□□ -0.58
RIF1-204ENST00000430328 A0A096LNJ9 63 aa11.44□□□□□ -0.58
RIF1-204ENST00000430328 KIF25-AS1Q9Y6Z4 181 aa11.44□□□□□ -0.58
RIF1-204ENST00000430328 CSNK1G2-AS1Q8NCQ2 148 aa11.44□□□□□ -0.58
RIF1-204ENST00000430328 COX8CQ7Z4L0 72 aa11.44□□□□□ -0.58
RIF1-204ENST00000430328 IGLV5-39A0A0G2JS06 123 aa11.43□□□□□ -0.58
RIF1-204ENST00000430328 CRIP3Q6Q6R5 217 aa11.42□□□□□ -0.58
RIF1-204ENST00000430328 CR1P17927 2039 aa11.42□□□□□ -0.58
RIF1-204ENST00000430328 SMCPP49901 116 aaPredicted RBP11.42□□□□□ -0.58
RIF1-204ENST00000430328 Q6ZRX8 168 aa11.42□□□□□ -0.58
RIF1-204ENST00000430328 WISP2O76076 250 aa11.41□□□□□ -0.58
RIF1-204ENST00000430328 MRPL34Q9BQ48 92 aaKnown RBP11.41□□□□□ -0.58
RIF1-204ENST00000430328 COX6B2Q6YFQ2 88 aa11.4□□□□□ -0.59
RIF1-204ENST00000430328 FAM218AQ96MZ4 157 aa11.4□□□□□ -0.59
RIF1-204ENST00000430328 LINC00336Q6ZUF6 198 aa11.38□□□□□ -0.59
RIF1-204ENST00000430328 IGHV3OR16-9A0A0B4J2B5 98 aa11.37□□□□□ -0.59
RIF1-204ENST00000430328 COL4A3Q01955 1670 aa11.37□□□□□ -0.59
RIF1-204ENST00000430328 PRO3102Q9H379 93 aa11.37□□□□□ -0.59
RIF1-204ENST00000430328 IGLV6-57P01721 117 aa11.36□□□□□ -0.59
RIF1-204ENST00000430328 A0A1W2PNU3 283 aaPredicted RBP11.36□□□□□ -0.59
RIF1-204ENST00000430328 CHTF8P0CG12 524 aa11.36□□□□□ -0.59
RIF1-204ENST00000430328 Q6ZRP5 223 aa11.36□□□□□ -0.59
RIF1-204ENST00000430328 PCSK5Q92824 1860 aa11.35□□□□□ -0.59
RIF1-204ENST00000430328 K7EQZ3 153 aa11.34□□□□□ -0.59
RIF1-204ENST00000430328 PRO0461Q9UI25 63 aa11.34□□□□□ -0.59
RIF1-204ENST00000430328 PHF5AQ7RTV0 110 aaKnown RBP11.33□□□□□ -0.6
RIF1-204ENST00000430328 PRR15Q8IV56 129 aa11.33□□□□□ -0.6
RIF1-204ENST00000430328 ST20-AS1Q8NBB2 130 aa11.32□□□□□ -0.6
RIF1-204ENST00000430328 LINC01546A6NGU7 62 aa11.32□□□□□ -0.6
RIF1-204ENST00000430328 MTORP42345 2549 aa11.31□□□□□ -0.6
RIF1-204ENST00000430328 LINC00483Q53H64 154 aa11.3□□□□□ -0.6
RIF1-204ENST00000430328 C16orf90A8MZG2 172 aa11.29□□□□□ -0.6
RIF1-204ENST00000430328 USP9XQ93008 2570 aaPredicted RBP11.29□□□□□ -0.6
RIF1-204ENST00000430328 A0A0D9SG42 100 aa11.29□□□□□ -0.6
RIF1-204ENST00000430328 KLKP1Q107X0 134 aa11.28□□□□□ -0.6
RIF1-204ENST00000430328 A0A0A0MQY5 61 aa11.28□□□□□ -0.6
RIF1-204ENST00000430328 FHL3Q13643 280 aa11.28□□□□□ -0.6
RIF1-204ENST00000430328 SPTBN4Q9H254 2564 aa11.27□□□□□ -0.61
RIF1-204ENST00000430328 IGLV5-45A0A087WSX0 123 aa11.25□□□□□ -0.61
RIF1-204ENST00000430328 NCOR2Q9Y618 2525 aa11.24□□□□□ -0.61
RIF1-204ENST00000430328 C16orf95Q9H693 158 aa11.24□□□□□ -0.61
RIF1-204ENST00000430328 Q1T7F1 81 aa11.24□□□□□ -0.61
RIF1-204ENST00000430328 H3BS24 57 aa11.22□□□□□ -0.61
RIF1-204ENST00000430328 C8orf17Q9NRJ1 99 aa11.22□□□□□ -0.61
RIF1-204ENST00000430328 ANKRD17O75179 2603 aaKnown RBP11.21□□□□□ -0.61
RIF1-204ENST00000430328 RTL8CO15255 209 aa11.21□□□□□ -0.62
RIF1-204ENST00000430328 LTBP2Q14767 1821 aa11.21□□□□□ -0.62
RIF1-204ENST00000430328 RBM12B-AS1Q9P1G2 102 aa11.19□□□□□ -0.62
RIF1-204ENST00000430328 SMR3AQ99954 134 aa11.19□□□□□ -0.62
RIF1-204ENST00000430328 AVPP01185 164 aa11.19□□□□□ -0.62
RIF1-204ENST00000430328 DSCR10P59022 87 aa11.17□□□□□ -0.62
RIF1-204ENST00000430328 FAM104AQ969W3 186 aa11.16□□□□□ -0.62
RIF1-204ENST00000430328 J3QL48 77 aa11.16□□□□□ -0.62
RIF1-204ENST00000430328 IGLV5-37A0A075B6J1 123 aa11.16□□□□□ -0.62
RIF1-204ENST00000430328 H3BNG1 76 aa11.15□□□□□ -0.62
RIF1-204ENST00000430328 OBSCN-AS1Q96MR7 158 aa11.15□□□□□ -0.62
RIF1-204ENST00000430328 IGLV5-48A0A075B6I7 105 aa11.15□□□□□ -0.62
RIF1-204ENST00000430328 H7BZZ5 65 aa11.15□□□□□ -0.63
RIF1-204ENST00000430328 A0A1B0GVX0 72 aa11.14□□□□□ -0.63
RIF1-204ENST00000430328 SPANXA2-OT1Q8N9U9 137 aa11.13□□□□□ -0.63
RIF1-204ENST00000430328 LINC00315P59091 139 aa11.11□□□□□ -0.63
RIF1-204ENST00000430328 USP24Q9UPU5 2620 aa11.11□□□□□ -0.63
RIF1-204ENST00000430328 GVQW2A0A096LPI5 108 aaPredicted RBP11.11□□□□□ -0.63
RIF1-204ENST00000430328 WIPF1O43516 503 aa11.08□□□□□ -0.64
RIF1-204ENST00000430328 ZNF575Q86XF7 245 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms