RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 IGHV3-73A0A0B4J1V6 119 aa3.52□□□□□ -1.85
RIF1-203ENST00000428287 A0A1B0GW54 56 aa3.52□□□□□ -1.85
RIF1-203ENST00000428287 ESRGQ1W209 222 aa3.52□□□□□ -1.85
RIF1-203ENST00000428287 TMEM254Q8TBM7 123 aa3.52□□□□□ -1.85
RIF1-203ENST00000428287 LAMTOR3Q9UHA4 124 aa3.52□□□□□ -1.85
RIF1-203ENST00000428287 TM2D3Q9BRN9 247 aa3.52□□□□□ -1.85
RIF1-203ENST00000428287 GIG44P09565 113 aaPredicted RBP3.52□□□□□ -1.85
RIF1-203ENST00000428287 PLAC8L1A1L4L8 177 aa3.52□□□□□ -1.85
RIF1-203ENST00000428287 F8WEM9 126 aa3.52□□□□□ -1.85
RIF1-203ENST00000428287 INSP01308 110 aa3.51□□□□□ -1.85
RIF1-203ENST00000428287 ODF3L2Q3SX64 289 aa3.51□□□□□ -1.85
RIF1-203ENST00000428287 BRD3OSQ6XYD6 125 aa3.51□□□□□ -1.85
RIF1-203ENST00000428287 LINC00158P58513 81 aa3.51□□□□□ -1.85
RIF1-203ENST00000428287 C6orf99Q4VX62 202 aa3.51□□□□□ -1.85
RIF1-203ENST00000428287 ZCCHC13Q8WW36 166 aaKnown RBP3.51□□□□□ -1.85
RIF1-203ENST00000428287 IGLV4-60A0A075B6I1 120 aa3.51□□□□□ -1.85
RIF1-203ENST00000428287 A0A0U1RQV1 116 aa3.51□□□□□ -1.85
RIF1-203ENST00000428287 CSNK1G2-AS1Q8NCQ2 148 aa3.51□□□□□ -1.85
RIF1-203ENST00000428287 SLPIP03973 132 aa3.5□□□□□ -1.85
RIF1-203ENST00000428287 STHQ8IWL8 128 aa3.5□□□□□ -1.85
RIF1-203ENST00000428287 CCL24O00175 119 aa3.5□□□□□ -1.85
RIF1-203ENST00000428287 Q1T7F1 81 aa3.5□□□□□ -1.85
RIF1-203ENST00000428287 LINC00474Q9P2X8 69 aa3.5□□□□□ -1.85
RIF1-203ENST00000428287 C19orf84I3L1E1 186 aa3.5□□□□□ -1.85
RIF1-203ENST00000428287 FSHBP01225 129 aa3.5□□□□□ -1.85
RIF1-203ENST00000428287 MAP6D1Q9H9H5 199 aa3.5□□□□□ -1.85
RIF1-203ENST00000428287 TRAV10A0A0B4J240 114 aa3.5□□□□□ -1.85
RIF1-203ENST00000428287 Q6ZTC4 211 aa3.5□□□□□ -1.85
RIF1-203ENST00000428287 C6orf226Q5I0X4 101 aa3.5□□□□□ -1.85
RIF1-203ENST00000428287 Q8NDZ9 215 aa3.49□□□□□ -1.85
RIF1-203ENST00000428287 MSMBP08118 114 aa3.49□□□□□ -1.85
RIF1-203ENST00000428287 CD164L2Q6UWJ8 174 aa3.49□□□□□ -1.85
RIF1-203ENST00000428287 PRR15Q8IV56 129 aa3.49□□□□□ -1.85
RIF1-203ENST00000428287 LINC00959A0A1B0GUT2 108 aa3.49□□□□□ -1.85
RIF1-203ENST00000428287 NBL1P41271 181 aa3.49□□□□□ -1.85
RIF1-203ENST00000428287 LINC00612Q8N6U2 182 aa3.49□□□□□ -1.85
RIF1-203ENST00000428287 HTN1P15515 57 aa3.49□□□□□ -1.85
RIF1-203ENST00000428287 C10orf99Q6UWK7 81 aa3.48□□□□□ -1.85
RIF1-203ENST00000428287 TOMM7Q9P0U1 55 aa3.48□□□□□ -1.85
RIF1-203ENST00000428287 GVQW2A0A096LPI5 108 aaPredicted RBP3.48□□□□□ -1.85
RIF1-203ENST00000428287 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.48□□□□□ -1.85
RIF1-203ENST00000428287 V9GYY9 64 aa3.48□□□□□ -1.85
RIF1-203ENST00000428287 SEC61GP60059 68 aa3.48□□□□□ -1.85
RIF1-203ENST00000428287 M0R2N4 97 aa3.48□□□□□ -1.85
RIF1-203ENST00000428287 PKIGQ9Y2B9 76 aa3.48□□□□□ -1.85
RIF1-203ENST00000428287 SPATA3Q8NHX4 192 aa3.47□□□□□ -1.85
RIF1-203ENST00000428287 RMI2Q96E14 147 aa3.47□□□□□ -1.85
RIF1-203ENST00000428287 NREPQ16612 68 aa3.47□□□□□ -1.85
RIF1-203ENST00000428287 TRGV1A0A0A0MS02 117 aa3.47□□□□□ -1.85
RIF1-203ENST00000428287 C1orf195Q5TG92 126 aa3.47□□□□□ -1.85
RIF1-203ENST00000428287 IGLV5-48A0A075B6I7 105 aa3.47□□□□□ -1.85
RIF1-203ENST00000428287 hDV103S1A0JD37 113 aa3.47□□□□□ -1.85
RIF1-203ENST00000428287 PRR3P79522 188 aaKnown RBP3.47□□□□□ -1.85
RIF1-203ENST00000428287 B4DSR2 109 aa3.47□□□□□ -1.85
RIF1-203ENST00000428287 BPY2O14599 106 aa3.47□□□□□ -1.85
RIF1-203ENST00000428287 CYP4F30PQ9H0H9 118 aa3.47□□□□□ -1.85
RIF1-203ENST00000428287 SNURFQ9Y675 71 aa3.47□□□□□ -1.85
RIF1-203ENST00000428287 WFDC9Q8NEX5 89 aa3.47□□□□□ -1.85
RIF1-203ENST00000428287 C19orf73Q9NVV2 129 aa3.47□□□□□ -1.85
RIF1-203ENST00000428287 HAMPP81172 84 aa3.46□□□□□ -1.85
RIF1-203ENST00000428287 Q6ZQY7 126 aa3.46□□□□□ -1.85
RIF1-203ENST00000428287 LY6EQ16553 131 aa3.46□□□□□ -1.86
RIF1-203ENST00000428287 FAM229BQ4G0N7 80 aa3.46□□□□□ -1.86
RIF1-203ENST00000428287 COX7BP24311 80 aa3.46□□□□□ -1.86
RIF1-203ENST00000428287 WFDC11Q8NEX6 87 aa3.46□□□□□ -1.86
RIF1-203ENST00000428287 GNLYP22749 145 aa3.46□□□□□ -1.86
RIF1-203ENST00000428287 PRYO14603 147 aa3.45□□□□□ -1.86
RIF1-203ENST00000428287 IGKV4-1P06312 121 aa3.45□□□□□ -1.86
RIF1-203ENST00000428287 Q6ZRP5 223 aa3.45□□□□□ -1.86
RIF1-203ENST00000428287 PRR34Q9NV39 138 aa3.45□□□□□ -1.86
RIF1-203ENST00000428287 LINC00528Q8N1L1 170 aa3.45□□□□□ -1.86
RIF1-203ENST00000428287 ZNF843Q8N446 348 aa3.45□□□□□ -1.86
RIF1-203ENST00000428287 DYNLRB2Q8TF09 96 aa3.45□□□□□ -1.86
RIF1-203ENST00000428287 DEFB112Q30KQ8 113 aa3.44□□□□□ -1.86
RIF1-203ENST00000428287 BRK1Q8WUW1 75 aa3.44□□□□□ -1.86
RIF1-203ENST00000428287 ZNF702PQ9H963 129 aa3.44□□□□□ -1.86
RIF1-203ENST00000428287 LINC01006Q8NI28 216 aa3.44□□□□□ -1.86
RIF1-203ENST00000428287 BBC3Q96PG8 261 aaPredicted RBP3.44□□□□□ -1.86
RIF1-203ENST00000428287 ANK3Q12955 4377 aaKnown RBP3.44□□□□□ -1.86
RIF1-203ENST00000428287 C1orf64Q8NEQ6 169 aa3.44□□□□□ -1.86
RIF1-203ENST00000428287 SPRR4Q96PI1 79 aa3.44□□□□□ -1.86
RIF1-203ENST00000428287 UBE2L6O14933 153 aa3.43□□□□□ -1.86
RIF1-203ENST00000428287 C16orf74Q96GX8 76 aa3.43□□□□□ -1.86
RIF1-203ENST00000428287 C11orf68Q9H3H3 251 aaKnown RBP3.43□□□□□ -1.86
RIF1-203ENST00000428287 SLURP1P55000 103 aa3.43□□□□□ -1.86
RIF1-203ENST00000428287 CMC4P56277 68 aaPredicted RBP3.43□□□□□ -1.86
RIF1-203ENST00000428287 DEFB123Q8N688 67 aa3.43□□□□□ -1.86
RIF1-203ENST00000428287 NOP10Q9NPE3 64 aaKnown RBP3.42□□□□□ -1.86
RIF1-203ENST00000428287 NDUFB1O75438 58 aa3.42□□□□□ -1.86
RIF1-203ENST00000428287 PMAIP1Q13794 54 aa3.42□□□□□ -1.86
RIF1-203ENST00000428287 ELOF1P60002 83 aaKnown RBP3.42□□□□□ -1.86
RIF1-203ENST00000428287 TNP2Q05952 138 aa3.42□□□□□ -1.86
RIF1-203ENST00000428287 FUSP35637 526 aaKnown RBP eCLIP3.42□□□□□ -1.86
RIF1-203ENST00000428287 CD164Q04900 197 aa3.42□□□□□ -1.86
RIF1-203ENST00000428287 Q6YL49 198 aa3.42□□□□□ -1.86
RIF1-203ENST00000428287 DIRC1Q969H9 104 aa3.42□□□□□ -1.86
RIF1-203ENST00000428287 C4orf3Q8WVX3 66 aa3.41□□□□□ -1.86
RIF1-203ENST00000428287 DEFB136Q30KP8 78 aa3.41□□□□□ -1.86
RIF1-203ENST00000428287 PRO0255Q9UI72 69 aa3.41□□□□□ -1.86
RIF1-203ENST00000428287 HIGD2BQ4VC39 106 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms