RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 SPATA3Q8NHX4 192 aa6.95□□□□□ -1.3
CLTCL1-202ENST00000427926 BCE1O60756 84 aa6.94□□□□□ -1.3
CLTCL1-202ENST00000427926 UTRNP46939 3433 aa6.94□□□□□ -1.3
CLTCL1-202ENST00000427926 H3BNG1 76 aa6.94□□□□□ -1.3
CLTCL1-202ENST00000427926 USP9XQ93008 2570 aaPredicted RBP6.94□□□□□ -1.3
CLTCL1-202ENST00000427926 HCG22E2RYF7 251 aa6.93□□□□□ -1.3
CLTCL1-202ENST00000427926 LINC00575Q6W349 94 aa6.93□□□□□ -1.3
CLTCL1-202ENST00000427926 ATP11AUNQ6ZP68 121 aa6.92□□□□□ -1.3
CLTCL1-202ENST00000427926 COL4A2P08572 1712 aa6.92□□□□□ -1.3
CLTCL1-202ENST00000427926 TET2Q6N021 2002 aaPredicted RBP6.91□□□□□ -1.3
CLTCL1-202ENST00000427926 SOSTDC1Q6X4U4 206 aa6.91□□□□□ -1.3
CLTCL1-202ENST00000427926 C7orf65Q6ZTY9 151 aa6.91□□□□□ -1.3
CLTCL1-202ENST00000427926 A0A087WYN8 130 aa6.91□□□□□ -1.3
CLTCL1-202ENST00000427926 AMELXQ99217 191 aa6.91□□□□□ -1.3
CLTCL1-202ENST00000427926 H0Y9P7 68 aa6.9□□□□□ -1.3
CLTCL1-202ENST00000427926 LINC00167Q96N53 147 aa6.9□□□□□ -1.3
CLTCL1-202ENST00000427926 CHTF8P0CG12 524 aa6.9□□□□□ -1.31
CLTCL1-202ENST00000427926 PHF5AQ7RTV0 110 aaKnown RBP6.9□□□□□ -1.31
CLTCL1-202ENST00000427926 USP9YO00507 2555 aaPredicted RBP6.9□□□□□ -1.31
CLTCL1-202ENST00000427926 LINC00588Q9Y4M8 146 aa6.9□□□□□ -1.31
CLTCL1-202ENST00000427926 A0A096LNJ9 63 aa6.89□□□□□ -1.31
CLTCL1-202ENST00000427926 C11orf72Q8NBR9 251 aa6.88□□□□□ -1.31
CLTCL1-202ENST00000427926 A8MTW9 85 aa6.88□□□□□ -1.31
CLTCL1-202ENST00000427926 Q8NBF4 154 aa6.88□□□□□ -1.31
CLTCL1-202ENST00000427926 SETD2Q9BYW2 2564 aaPredicted RBP6.88□□□□□ -1.31
CLTCL1-202ENST00000427926 MUC4Q99102 2169 aa6.86□□□□□ -1.31
CLTCL1-202ENST00000427926 ADAMTSL4-AS1Q5T5F5 129 aa6.84□□□□□ -1.31
CLTCL1-202ENST00000427926 KTN1-AS1Q86SY8 53 aa6.84□□□□□ -1.31
CLTCL1-202ENST00000427926 Q8NAQ8 132 aa6.84□□□□□ -1.31
CLTCL1-202ENST00000427926 K7EIL1 84 aa6.84□□□□□ -1.31
CLTCL1-202ENST00000427926 KIAA0087Q14695 138 aa6.84□□□□□ -1.31
CLTCL1-202ENST00000427926 C6orf48Q9UBA6 75 aa6.84□□□□□ -1.31
CLTCL1-202ENST00000427926 TSPEAR-AS2P59090 65 aa6.84□□□□□ -1.32
CLTCL1-202ENST00000427926 MTORP42345 2549 aa6.83□□□□□ -1.32
CLTCL1-202ENST00000427926 LINC00313P59037 77 aa6.83□□□□□ -1.32
CLTCL1-202ENST00000427926 EPM2AB3EWF7 344 aa6.83□□□□□ -1.32
CLTCL1-202ENST00000427926 PSPHP1O15172 72 aa6.83□□□□□ -1.32
CLTCL1-202ENST00000427926 LINC00336Q6ZUF6 198 aa6.83□□□□□ -1.32
CLTCL1-202ENST00000427926 Q8N3U1 123 aa6.83□□□□□ -1.32
CLTCL1-202ENST00000427926 Q96NJ1 140 aa6.83□□□□□ -1.32
CLTCL1-202ENST00000427926 LCA10Q71F78 164 aa6.82□□□□□ -1.32
CLTCL1-202ENST00000427926 POLQO75417 2590 aa6.81□□□□□ -1.32
CLTCL1-202ENST00000427926 AGRNO00468 2067 aa6.81□□□□□ -1.32
CLTCL1-202ENST00000427926 LINC01546A6NGU7 62 aa6.81□□□□□ -1.32
CLTCL1-202ENST00000427926 C1orf64Q8NEQ6 169 aa6.81□□□□□ -1.32
CLTCL1-202ENST00000427926 SMR3BP02814 79 aaPredicted RBP6.8□□□□□ -1.32
CLTCL1-202ENST00000427926 F8P00451 2351 aa6.8□□□□□ -1.32
CLTCL1-202ENST00000427926 IGHV3OR16-9A0A0B4J2B5 98 aa6.79□□□□□ -1.32
CLTCL1-202ENST00000427926 TP53AIP1Q9HCN2 124 aa6.79□□□□□ -1.32
CLTCL1-202ENST00000427926 H3BS24 57 aa6.78□□□□□ -1.32
CLTCL1-202ENST00000427926 C8orf87E5RJ46 101 aa6.78□□□□□ -1.32
CLTCL1-202ENST00000427926 PRR15Q8IV56 129 aa6.78□□□□□ -1.32
CLTCL1-202ENST00000427926 A0A087WVE0 104 aa6.78□□□□□ -1.32
CLTCL1-202ENST00000427926 DNAH10OSP0CZ25 163 aa6.77□□□□□ -1.33
CLTCL1-202ENST00000427926 KRTAP10-11P60412 298 aa6.77□□□□□ -1.33
CLTCL1-202ENST00000427926 FAM19A4Q96LR4 140 aa6.77□□□□□ -1.33
CLTCL1-202ENST00000427926 DNAH12Q6ZR08 3092 aa6.77□□□□□ -1.33
CLTCL1-202ENST00000427926 LINC00304Q8N9R0 145 aa6.77□□□□□ -1.33
CLTCL1-202ENST00000427926 PKD1L2Q7Z442 2459 aa6.76□□□□□ -1.33
CLTCL1-202ENST00000427926 GVQW2A0A096LPI5 108 aaPredicted RBP6.76□□□□□ -1.33
CLTCL1-202ENST00000427926 TMEM254Q8TBM7 123 aa6.76□□□□□ -1.33
CLTCL1-202ENST00000427926 Q6ZRX8 168 aa6.76□□□□□ -1.33
CLTCL1-202ENST00000427926 CYP4F30PQ9H0H9 118 aa6.75□□□□□ -1.33
CLTCL1-202ENST00000427926 PRO0461Q9UI25 63 aa6.74□□□□□ -1.33
CLTCL1-202ENST00000427926 ACYP2P14621 99 aa6.74□□□□□ -1.33
CLTCL1-202ENST00000427926 LINC00476Q8WZB0 136 aa6.74□□□□□ -1.33
CLTCL1-202ENST00000427926 IGLV5-39A0A0G2JS06 123 aa6.74□□□□□ -1.33
CLTCL1-202ENST00000427926 SPAG11AQ6PDA7 123 aa6.74□□□□□ -1.33
CLTCL1-202ENST00000427926 A0A1B0GU69 56 aa6.73□□□□□ -1.33
CLTCL1-202ENST00000427926 TM2D3Q9BRN9 247 aa6.73□□□□□ -1.33
CLTCL1-202ENST00000427926 EPG5Q9HCE0 2579 aa6.72□□□□□ -1.33
CLTCL1-202ENST00000427926 ELOF1P60002 83 aaKnown RBP6.72□□□□□ -1.33
CLTCL1-202ENST00000427926 ST20-AS1Q8NBB2 130 aa6.72□□□□□ -1.33
CLTCL1-202ENST00000427926 ANKRD17O75179 2603 aaKnown RBP6.72□□□□□ -1.33
CLTCL1-202ENST00000427926 PTPRBP23467 1997 aa6.72□□□□□ -1.33
CLTCL1-202ENST00000427926 SMIM29Q86T20 159 aa6.71□□□□□ -1.33
CLTCL1-202ENST00000427926 A0A087WTM6 91 aa6.71□□□□□ -1.34
CLTCL1-202ENST00000427926 PCSK5Q92824 1860 aa6.7□□□□□ -1.34
CLTCL1-202ENST00000427926 KLK9Q2XQG4 91 aa6.7□□□□□ -1.34
CLTCL1-202ENST00000427926 ACANP16112 2415 aa6.7□□□□□ -1.34
CLTCL1-202ENST00000427926 Q9UF83 564 aa6.69□□□□□ -1.34
CLTCL1-202ENST00000427926 C19orf73Q9NVV2 129 aa6.69□□□□□ -1.34
CLTCL1-202ENST00000427926 C9orf92A6NGG3 77 aa6.69□□□□□ -1.34
CLTCL1-202ENST00000427926 SMCPP49901 116 aaPredicted RBP6.69□□□□□ -1.34
CLTCL1-202ENST00000427926 FLNBO75369 2602 aaKnown RBP6.69□□□□□ -1.34
CLTCL1-202ENST00000427926 A0A1B0GW54 56 aa6.68□□□□□ -1.34
CLTCL1-202ENST00000427926 RBM12B-AS1Q9P1G2 102 aa6.67□□□□□ -1.34
CLTCL1-202ENST00000427926 LINC00846Q9NV44 126 aa6.67□□□□□ -1.34
CLTCL1-202ENST00000427926 COL27A1Q8IZC6 1860 aaPredicted RBP6.67□□□□□ -1.34
CLTCL1-202ENST00000427926 FAM168BA1KXE4 195 aa6.67□□□□□ -1.34
CLTCL1-202ENST00000427926 LINC00528Q8N1L1 170 aa6.67□□□□□ -1.34
CLTCL1-202ENST00000427926 CEP350Q5VT06 3117 aa6.66□□□□□ -1.34
CLTCL1-202ENST00000427926 ERC2-IT1O76042 136 aa6.66□□□□□ -1.34
CLTCL1-202ENST00000427926 TRAV22A0A0B4J277 110 aa6.65□□□□□ -1.34
CLTCL1-202ENST00000427926 ZNF861PO60384 105 aa6.65□□□□□ -1.34
CLTCL1-202ENST00000427926 IGLV5-37A0A075B6J1 123 aa6.64□□□□□ -1.35
CLTCL1-202ENST00000427926 SSBP3-AS1Q7Z2R9 100 aa6.63□□□□□ -1.35
CLTCL1-202ENST00000427926 IGLV5-45A0A087WSX0 123 aa6.63□□□□□ -1.35
CLTCL1-202ENST00000427926 OBSCN-AS1Q96MR7 158 aa6.63□□□□□ -1.35
CLTCL1-202ENST00000427926 KRTAP10-3P60369 221 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms