RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 HIST1H2BLQ99880 126 aa12.63□□□□□ -0.39
HSPG2-205ENST00000427897 PMCHL2Q9BQD1 86 aa12.63□□□□□ -0.39
HSPG2-205ENST00000427897 C5orf52A6NGY3 159 aa12.62□□□□□ -0.39
HSPG2-205ENST00000427897 AKR1D1P51857 326 aa12.61□□□□□ -0.39
HSPG2-205ENST00000427897 HERVK_113P61574 105 aa12.61□□□□□ -0.39
HSPG2-205ENST00000427897 SFTA2Q6UW10 78 aa12.61□□□□□ -0.39
HSPG2-205ENST00000427897 PFN2P35080 140 aa12.6□□□□□ -0.39
HSPG2-205ENST00000427897 MRPL55Q7Z7F7 128 aaKnown RBP12.6□□□□□ -0.39
HSPG2-205ENST00000427897 H0Y9J4 135 aa12.59□□□□□ -0.39
HSPG2-205ENST00000427897 KRTAP10-8P60410 259 aa12.59□□□□□ -0.39
HSPG2-205ENST00000427897 NKAPP1Q8N9T2 125 aa12.58□□□□□ -0.4
HSPG2-205ENST00000427897 TP73-AS1Q9UF72 201 aa12.58□□□□□ -0.4
HSPG2-205ENST00000427897 PLEKHB2Q96CS7 222 aa12.56□□□□□ -0.4
HSPG2-205ENST00000427897 ZNF625Q96I27 306 aaPredicted RBP12.55□□□□□ -0.4
HSPG2-205ENST00000427897 RPL37AP8A6NKH3 93 aa12.54□□□□□ -0.4
HSPG2-205ENST00000427897 LEPROTO15243 131 aa12.54□□□□□ -0.4
HSPG2-205ENST00000427897 ERG28Q9UKR5 140 aa12.54□□□□□ -0.4
HSPG2-205ENST00000427897 GAGE10A6NGK3 116 aa12.53□□□□□ -0.4
HSPG2-205ENST00000427897 LINC00167Q96N53 147 aa12.53□□□□□ -0.4
HSPG2-205ENST00000427897 ZNF861PO60384 105 aa12.52□□□□□ -0.41
HSPG2-205ENST00000427897 COX17Q14061 63 aa12.52□□□□□ -0.41
HSPG2-205ENST00000427897 TMA7Q9Y2S6 64 aaKnown RBP12.51□□□□□ -0.41
HSPG2-205ENST00000427897 E9PLD3 99 aa12.5□□□□□ -0.41
HSPG2-205ENST00000427897 J3QQQ9 107 aa12.5□□□□□ -0.41
HSPG2-205ENST00000427897 LGALS3P17931 250 aaKnown RBP12.5□□□□□ -0.41
HSPG2-205ENST00000427897 RPL28P46779 137 aaKnown RBP12.5□□□□□ -0.41
HSPG2-205ENST00000427897 PRR26Q8N8Z3 221 aa12.5□□□□□ -0.41
HSPG2-205ENST00000427897 NDUFA12Q9UI09 145 aa12.5□□□□□ -0.41
HSPG2-205ENST00000427897 MYMXA0A1B0GTQ4 84 aa12.49□□□□□ -0.41
HSPG2-205ENST00000427897 NMUP48645 174 aa12.49□□□□□ -0.41
HSPG2-205ENST00000427897 HERV-K104P63124 156 aa12.49□□□□□ -0.41
HSPG2-205ENST00000427897 RPL24P83731 157 aaKnown RBP12.49□□□□□ -0.41
HSPG2-205ENST00000427897 SND1-IT1Q9HBX3 110 aa12.49□□□□□ -0.41
HSPG2-205ENST00000427897 BCE1O60756 84 aa12.48□□□□□ -0.41
HSPG2-205ENST00000427897 LINC00158P58513 81 aa12.48□□□□□ -0.41
HSPG2-205ENST00000427897 IGLV1-50A0A075B6I6 118 aa12.47□□□□□ -0.41
HSPG2-205ENST00000427897 IGLV5-37A0A075B6J1 123 aa12.47□□□□□ -0.41
HSPG2-205ENST00000427897 LINC00587B1AMM8 73 aa12.46□□□□□ -0.41
HSPG2-205ENST00000427897 TSPEAR-AS2P59090 65 aa12.46□□□□□ -0.41
HSPG2-205ENST00000427897 UBE2AP49459 152 aa12.45□□□□□ -0.42
HSPG2-205ENST00000427897 IGKV2-28A0A075B6P5 120 aa12.44□□□□□ -0.42
HSPG2-205ENST00000427897 A0A0U1RRA0 63 aa12.44□□□□□ -0.42
HSPG2-205ENST00000427897 SCGB1D1O95968 90 aa12.44□□□□□ -0.42
HSPG2-205ENST00000427897 IGKV2D-28P01615 120 aa12.44□□□□□ -0.42
HSPG2-205ENST00000427897 ATOH7Q8N100 152 aa12.44□□□□□ -0.42
HSPG2-205ENST00000427897 RPL13AP40429 203 aaKnown RBP12.43□□□□□ -0.42
HSPG2-205ENST00000427897 MEIG1Q5JSS6 88 aa12.43□□□□□ -0.42
HSPG2-205ENST00000427897 HSBP1L1C9JCN9 74 aa12.42□□□□□ -0.42
HSPG2-205ENST00000427897 VPREB1P12018 145 aa12.41□□□□□ -0.42
HSPG2-205ENST00000427897 KRTAP1-4P0C5Y4 121 aa12.4□□□□□ -0.42
HSPG2-205ENST00000427897 TNXBP22105 4242 aa12.4□□□□□ -0.42
HSPG2-205ENST00000427897 HMCN2Q8NDA2 5059 aa12.38□□□□□ -0.43
HSPG2-205ENST00000427897 IGKV2D-26A0A0A0MRZ7 120 aa12.37□□□□□ -0.43
HSPG2-205ENST00000427897 SMIM13P0DJ93 91 aa12.37□□□□□ -0.43
HSPG2-205ENST00000427897 ANKRD39Q53RE8 183 aa12.37□□□□□ -0.43
HSPG2-205ENST00000427897 ZNF815PA8K554 130 aa12.36□□□□□ -0.43
HSPG2-205ENST00000427897 FAM19A1Q7Z5A9 133 aa12.36□□□□□ -0.43
HSPG2-205ENST00000427897 A0A0J9YXY3 114 aa12.34□□□□□ -0.43
HSPG2-205ENST00000427897 JOSD1Q15040 202 aaPredicted RBP12.34□□□□□ -0.43
HSPG2-205ENST00000427897 TMEM126AQ9H061 195 aa12.34□□□□□ -0.43
HSPG2-205ENST00000427897 BOD1L2Q8IYS8 172 aa12.33□□□□□ -0.44
HSPG2-205ENST00000427897 MIR7-3HGQ8N6C7 128 aa12.33□□□□□ -0.44
HSPG2-205ENST00000427897 TMEM238C9JI98 176 aa12.32□□□□□ -0.44
HSPG2-205ENST00000427897 M0R378 163 aa12.32□□□□□ -0.44
HSPG2-205ENST00000427897 CRYGAP11844 174 aa12.32□□□□□ -0.44
HSPG2-205ENST00000427897 PRLHP81277 87 aa12.31□□□□□ -0.44
HSPG2-205ENST00000427897 TIMM17BO60830 172 aa12.3□□□□□ -0.44
HSPG2-205ENST00000427897 SCGB1D4Q6XE38 83 aa12.3□□□□□ -0.44
HSPG2-205ENST00000427897 Q8NDZ9 215 aa12.3□□□□□ -0.44
HSPG2-205ENST00000427897 TYMSOSQ8TAI1 123 aa12.3□□□□□ -0.44
HSPG2-205ENST00000427897 TTTY13Q9BZ97 58 aa12.3□□□□□ -0.44
HSPG2-205ENST00000427897 PCP2Q8IVA1 136 aa12.28□□□□□ -0.44
HSPG2-205ENST00000427897 NCR3O14931 201 aa12.27□□□□□ -0.45
HSPG2-205ENST00000427897 S100A12P80511 92 aa12.27□□□□□ -0.45
HSPG2-205ENST00000427897 KRTAP13-1Q8IUC0 172 aa12.27□□□□□ -0.45
HSPG2-205ENST00000427897 MIEN1Q9BRT3 115 aa12.27□□□□□ -0.45
HSPG2-205ENST00000427897 VAMP8Q9BV40 100 aa12.27□□□□□ -0.45
HSPG2-205ENST00000427897 DAND5Q8N907 189 aa12.26□□□□□ -0.45
HSPG2-205ENST00000427897 ANAPC11Q9NYG5 84 aa12.26□□□□□ -0.45
HSPG2-205ENST00000427897 LOC107984156A0A0G2JMH3 177 aa12.25□□□□□ -0.45
HSPG2-205ENST00000427897 ARL17AQ8IVW1 177 aa12.25□□□□□ -0.45
HSPG2-205ENST00000427897 HIGD2AQ9BW72 106 aa12.25□□□□□ -0.45
HSPG2-205ENST00000427897 A0A087X002 238 aa12.24□□□□□ -0.45
HSPG2-205ENST00000427897 TSPAN13O95857 204 aa12.24□□□□□ -0.45
HSPG2-205ENST00000427897 PYY3Q5JQD4 70 aa12.24□□□□□ -0.45
HSPG2-205ENST00000427897 ADAMTSL4-AS1Q5T5F5 129 aa12.23□□□□□ -0.45
HSPG2-205ENST00000427897 LITAFQ99732 161 aa12.23□□□□□ -0.45
HSPG2-205ENST00000427897 PRR4Q16378 134 aa12.22□□□□□ -0.45
HSPG2-205ENST00000427897 SPATA45Q537H7 98 aa12.22□□□□□ -0.45
HSPG2-205ENST00000427897 PAM16Q9Y3D7 125 aa12.22□□□□□ -0.45
HSPG2-205ENST00000427897 PRYO14603 147 aa12.21□□□□□ -0.45
HSPG2-205ENST00000427897 FAM229BQ4G0N7 80 aa12.21□□□□□ -0.45
HSPG2-205ENST00000427897 COPS9Q8WXC6 57 aa12.21□□□□□ -0.45
HSPG2-205ENST00000427897 COX8AP10176 69 aa12.2□□□□□ -0.46
HSPG2-205ENST00000427897 Q6ZVH6 145 aa12.2□□□□□ -0.46
HSPG2-205ENST00000427897 ETDCA0A1B0GVM5 59 aa12.19□□□□□ -0.46
HSPG2-205ENST00000427897 SPANXDQ9BXN6 97 aa12.19□□□□□ -0.46
HSPG2-205ENST00000427897 SPANXCQ9NY87 97 aa12.19□□□□□ -0.46
HSPG2-205ENST00000427897 DLEU1O43261 78 aa12.18□□□□□ -0.46
HSPG2-205ENST00000427897 LINC00308Q8TCZ7 52 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms