RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 SPATA3Q8NHX4 192 aa11.27□□□□□ -0.61
PKP4-205ENST00000426248 TRBV7-6A0A0J9YX20 115 aa11.26□□□□□ -0.61
PKP4-205ENST00000426248 CCKP06307 115 aa11.26□□□□□ -0.61
PKP4-205ENST00000426248 COX7B2Q8TF08 81 aa11.26□□□□□ -0.61
PKP4-205ENST00000426248 IGHV4-30-4P0DP06 118 aa11.25□□□□□ -0.61
PKP4-205ENST00000426248 BEAN1Q3B7T3 259 aa11.25□□□□□ -0.61
PKP4-205ENST00000426248 Q6ZSN1 163 aa11.25□□□□□ -0.61
PKP4-205ENST00000426248 JMJD7-PLA2G4BH0Y9G9 81 aa11.25□□□□□ -0.61
PKP4-205ENST00000426248 LRCOL1A6NCL2 159 aa11.24□□□□□ -0.61
PKP4-205ENST00000426248 ATP5EP2Q5VTU8 51 aa11.23□□□□□ -0.61
PKP4-205ENST00000426248 TRAV7A0A075B6U4 112 aa11.22□□□□□ -0.61
PKP4-205ENST00000426248 CCL18P55774 89 aa11.21□□□□□ -0.61
PKP4-205ENST00000426248 C22orf24Q9Y442 160 aa11.21□□□□□ -0.61
PKP4-205ENST00000426248 H7BZZ5 65 aa11.21□□□□□ -0.61
PKP4-205ENST00000426248 ZFHX3Q15911 3703 aa11.2□□□□□ -0.62
PKP4-205ENST00000426248 GYPEP15421 78 aa11.2□□□□□ -0.62
PKP4-205ENST00000426248 SPART-AS1P0CW21 52 aa11.19□□□□□ -0.62
PKP4-205ENST00000426248 IL17DQ8TAD2 202 aa11.19□□□□□ -0.62
PKP4-205ENST00000426248 DEFB105AQ8NG35 78 aa11.19□□□□□ -0.62
PKP4-205ENST00000426248 K7EQD1 137 aa11.19□□□□□ -0.62
PKP4-205ENST00000426248 TMEM256-PLSCR3K7ERE1 68 aa11.19□□□□□ -0.62
PKP4-205ENST00000426248 TRAV10A0A0B4J240 114 aa11.18□□□□□ -0.62
PKP4-205ENST00000426248 RETNQ9HD89 108 aa11.18□□□□□ -0.62
PKP4-205ENST00000426248 PRR3P79522 188 aaKnown RBP11.18□□□□□ -0.62
PKP4-205ENST00000426248 IGKV2-28A0A075B6P5 120 aa11.16□□□□□ -0.62
PKP4-205ENST00000426248 IGHV4-28A0A0C4DH34 117 aa11.16□□□□□ -0.62
PKP4-205ENST00000426248 LOC100131303A0A0U1RQF7 123 aa11.16□□□□□ -0.62
PKP4-205ENST00000426248 IGKV2D-28P01615 120 aa11.16□□□□□ -0.62
PKP4-205ENST00000426248 FAM104AQ969W3 186 aa11.16□□□□□ -0.62
PKP4-205ENST00000426248 MIFP14174 115 aa11.16□□□□□ -0.62
PKP4-205ENST00000426248 IGLV5-39A0A0G2JS06 123 aa11.16□□□□□ -0.62
PKP4-205ENST00000426248 A0A087WZ39 114 aa11.15□□□□□ -0.62
PKP4-205ENST00000426248 FP248Q71RG6 208 aaPredicted RBP11.15□□□□□ -0.62
PKP4-205ENST00000426248 TENM1Q9UKZ4 2725 aa11.15□□□□□ -0.62
PKP4-205ENST00000426248 Q8N3U1 123 aa11.15□□□□□ -0.63
PKP4-205ENST00000426248 C11orf72Q8NBR9 251 aa11.15□□□□□ -0.63
PKP4-205ENST00000426248 C19orf73Q9NVV2 129 aa11.12□□□□□ -0.63
PKP4-205ENST00000426248 KLK12Q9UKR0 248 aa11.11□□□□□ -0.63
PKP4-205ENST00000426248 LYPD5Q6UWN5 251 aa11.11□□□□□ -0.63
PKP4-205ENST00000426248 TRBV10-1A0A0K0K1A3 114 aa11.11□□□□□ -0.63
PKP4-205ENST00000426248 ZNF561-AS1K7EIQ3 104 aa11.11□□□□□ -0.63
PKP4-205ENST00000426248 TM2D3Q9BRN9 247 aa11.11□□□□□ -0.63
PKP4-205ENST00000426248 IGKV2D-24A0A075B6R9 120 aa11.11□□□□□ -0.63
PKP4-205ENST00000426248 FUSP35637 526 aaKnown RBP eCLIP11.11□□□□□ -0.63
PKP4-205ENST00000426248 PRO0255Q9UI72 69 aa11.11□□□□□ -0.63
PKP4-205ENST00000426248 LINC01547P58512 204 aaPredicted RBP11.1□□□□□ -0.63
PKP4-205ENST00000426248 C6orf99Q4VX62 202 aa11.1□□□□□ -0.63
PKP4-205ENST00000426248 IGLV5-45A0A087WSX0 123 aa11.09□□□□□ -0.63
PKP4-205ENST00000426248 ZNF469Q96JG9 3925 aaPredicted RBP11.09□□□□□ -0.63
PKP4-205ENST00000426248 Q8N814 137 aa11.08□□□□□ -0.64
PKP4-205ENST00000426248 A8MTW9 85 aa11.07□□□□□ -0.64
PKP4-205ENST00000426248 PSCAO43653 123 aa11.07□□□□□ -0.64
PKP4-205ENST00000426248 PMAIP1Q13794 54 aa11.07□□□□□ -0.64
PKP4-205ENST00000426248 NREPQ16612 68 aa11.07□□□□□ -0.64
PKP4-205ENST00000426248 CDC42SE2Q9NRR3 84 aa11.07□□□□□ -0.64
PKP4-205ENST00000426248 NDUFC1O43677 76 aa11.07□□□□□ -0.64
PKP4-205ENST00000426248 GIG44P09565 113 aaPredicted RBP11.07□□□□□ -0.64
PKP4-205ENST00000426248 HIGD2BQ4VC39 106 aa11.07□□□□□ -0.64
PKP4-205ENST00000426248 LYRM9A8MSI8 78 aa11.06□□□□□ -0.64
PKP4-205ENST00000426248 Q6ZVQ6 151 aa11.06□□□□□ -0.64
PKP4-205ENST00000426248 PSPHP1O15172 72 aa11.06□□□□□ -0.64
PKP4-205ENST00000426248 XAGE1AQ9HD64 81 aa11.06□□□□□ -0.64
PKP4-205ENST00000426248 TMEM254Q8TBM7 123 aa11.06□□□□□ -0.64
PKP4-205ENST00000426248 PRR4Q16378 134 aa11.05□□□□□ -0.64
PKP4-205ENST00000426248 UBE2DNLQ8IWF7 75 aa11.05□□□□□ -0.64
PKP4-205ENST00000426248 TRBV6-4A0A1B0GX49 114 aa11.05□□□□□ -0.64
PKP4-205ENST00000426248 IBA57-AS1B1ANH7 110 aa11.05□□□□□ -0.64
PKP4-205ENST00000426248 VWFP04275 2813 aa11.05□□□□□ -0.64
PKP4-205ENST00000426248 Q8N9L7 120 aa11.04□□□□□ -0.64
PKP4-205ENST00000426248 C11orf45Q8TAV5 145 aa11.04□□□□□ -0.64
PKP4-205ENST00000426248 NTM-AS1Q6ZSK4 140 aa11.04□□□□□ -0.64
PKP4-205ENST00000426248 KLKP1Q107X0 134 aa11.03□□□□□ -0.64
PKP4-205ENST00000426248 KRTAP10-11P60412 298 aa11.03□□□□□ -0.64
PKP4-205ENST00000426248 MDFIQ99750 246 aa11.03□□□□□ -0.64
PKP4-205ENST00000426248 A0A096LNI7 61 aa11.03□□□□□ -0.64
PKP4-205ENST00000426248 BPY2O14599 106 aa11.03□□□□□ -0.64
PKP4-205ENST00000426248 A0A0J9YWU9 116 aa11.02□□□□□ -0.64
PKP4-205ENST00000426248 X6R8D5 127 aa11.02□□□□□ -0.64
PKP4-205ENST00000426248 ATP5EP56381 51 aaPredicted RBP11.02□□□□□ -0.65
PKP4-205ENST00000426248 LINC00269Q8N2A0 174 aa11.02□□□□□ -0.65
PKP4-205ENST00000426248 ESRGQ1W209 222 aa11.02□□□□□ -0.65
PKP4-205ENST00000426248 TRBV10-3A0A0K0K1G6 114 aa11.01□□□□□ -0.65
PKP4-205ENST00000426248 CSNK1G2-AS1Q8NCQ2 148 aa11.01□□□□□ -0.65
PKP4-205ENST00000426248 CELA1Q9UNI1 258 aa11.01□□□□□ -0.65
PKP4-205ENST00000426248 Q6ZQY7 126 aa11□□□□□ -0.65
PKP4-205ENST00000426248 NANOS2P60321 138 aaKnown RBP11□□□□□ -0.65
PKP4-205ENST00000426248 FAM229BQ4G0N7 80 aa11□□□□□ -0.65
PKP4-205ENST00000426248 OBSCN-AS1Q96MR7 158 aa10.99□□□□□ -0.65
PKP4-205ENST00000426248 DEFB131BA0A096LNP1 70 aa10.99□□□□□ -0.65
PKP4-205ENST00000426248 M0R2N4 97 aa10.99□□□□□ -0.65
PKP4-205ENST00000426248 SPTSSBQ8NFR3 76 aa10.98□□□□□ -0.65
PKP4-205ENST00000426248 PRYO14603 147 aa10.98□□□□□ -0.65
PKP4-205ENST00000426248 MRPL55Q7Z7F7 128 aaKnown RBP10.97□□□□□ -0.65
PKP4-205ENST00000426248 Q6ZTC4 211 aa10.97□□□□□ -0.65
PKP4-205ENST00000426248 IGLV4-60A0A075B6I1 120 aa10.96□□□□□ -0.65
PKP4-205ENST00000426248 TRBV6-8A0A0A6YYG3 113 aa10.96□□□□□ -0.65
PKP4-205ENST00000426248 C9orf116Q5BN46 136 aaPredicted RBP10.95□□□□□ -0.66
PKP4-205ENST00000426248 CAMK2N2Q96S95 79 aa10.95□□□□□ -0.66
PKP4-205ENST00000426248 HIGD2AQ9BW72 106 aa10.95□□□□□ -0.66
PKP4-205ENST00000426248 IGKV2-24A0A0C4DH68 120 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms