RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 SPAG11BQ08648 103 aa5.14□□□□□ -1.59
SMARCC1-202ENST00000425518 NDUFC2O95298 119 aa5.13□□□□□ -1.59
SMARCC1-202ENST00000425518 COX17Q14061 63 aa5.13□□□□□ -1.59
SMARCC1-202ENST00000425518 KLK12Q9UKR0 248 aa5.13□□□□□ -1.59
SMARCC1-202ENST00000425518 UNC79Q9P2D8 2635 aa5.13□□□□□ -1.59
SMARCC1-202ENST00000425518 IGHV4-28A0A0C4DH34 117 aa5.13□□□□□ -1.59
SMARCC1-202ENST00000425518 SMIM9A6NGZ8 99 aa5.13□□□□□ -1.59
SMARCC1-202ENST00000425518 ANK3Q12955 4377 aaKnown RBP5.13□□□□□ -1.59
SMARCC1-202ENST00000425518 UBL5Q9BZL1 73 aa5.13□□□□□ -1.59
SMARCC1-202ENST00000425518 ATRQ13535 2644 aa5.13□□□□□ -1.59
SMARCC1-202ENST00000425518 CYSRT1A8MQ03 144 aa5.12□□□□□ -1.59
SMARCC1-202ENST00000425518 LYRM9A8MSI8 78 aa5.12□□□□□ -1.59
SMARCC1-202ENST00000425518 LINC00167Q96N53 147 aa5.12□□□□□ -1.59
SMARCC1-202ENST00000425518 RBM3P98179 157 aaKnown RBP5.12□□□□□ -1.59
SMARCC1-202ENST00000425518 LINC00575Q6W349 94 aa5.12□□□□□ -1.59
SMARCC1-202ENST00000425518 XAGE1AQ9HD64 81 aa5.12□□□□□ -1.59
SMARCC1-202ENST00000425518 CELA1Q9UNI1 258 aa5.12□□□□□ -1.59
SMARCC1-202ENST00000425518 GHRHP01286 108 aa5.12□□□□□ -1.59
SMARCC1-202ENST00000425518 PDZD2O15018 2839 aa5.12□□□□□ -1.59
SMARCC1-202ENST00000425518 HAMPP81172 84 aa5.11□□□□□ -1.59
SMARCC1-202ENST00000425518 J3KT08 172 aa5.1□□□□□ -1.59
SMARCC1-202ENST00000425518 Q6ZQY7 126 aa5.1□□□□□ -1.59
SMARCC1-202ENST00000425518 M0R2N4 97 aa5.1□□□□□ -1.59
SMARCC1-202ENST00000425518 UPK3BQ9BT76 320 aa5.1□□□□□ -1.59
SMARCC1-202ENST00000425518 TRBV10-3A0A0K0K1G6 114 aa5.09□□□□□ -1.59
SMARCC1-202ENST00000425518 DSCR8Q96T75 97 aa5.09□□□□□ -1.59
SMARCC1-202ENST00000425518 TENM1Q9UKZ4 2725 aa5.09□□□□□ -1.59
SMARCC1-202ENST00000425518 APOC4P55056 127 aa5.09□□□□□ -1.6
SMARCC1-202ENST00000425518 C9orf66Q5T8R8 295 aa5.09□□□□□ -1.6
SMARCC1-202ENST00000425518 FAM19A5Q7Z5A7 132 aaPredicted RBP5.09□□□□□ -1.6
SMARCC1-202ENST00000425518 ZNF561-AS1K7EIQ3 104 aa5.08□□□□□ -1.6
SMARCC1-202ENST00000425518 SPART-AS1P0CW21 52 aa5.08□□□□□ -1.6
SMARCC1-202ENST00000425518 HIGD2BQ4VC39 106 aa5.08□□□□□ -1.6
SMARCC1-202ENST00000425518 LELP1Q5T871 98 aa5.08□□□□□ -1.6
SMARCC1-202ENST00000425518 Q6ZQT0 140 aa5.08□□□□□ -1.6
SMARCC1-202ENST00000425518 ATP5EP2Q5VTU8 51 aa5.08□□□□□ -1.6
SMARCC1-202ENST00000425518 C20orf197Q8N268 126 aa5.08□□□□□ -1.6
SMARCC1-202ENST00000425518 A0A0J9YWU9 116 aa5.07□□□□□ -1.6
SMARCC1-202ENST00000425518 IGLV6-57P01721 117 aa5.07□□□□□ -1.6
SMARCC1-202ENST00000425518 IGHV4-30-4P0DP06 118 aa5.07□□□□□ -1.6
SMARCC1-202ENST00000425518 TMEM258P61165 79 aa5.07□□□□□ -1.6
SMARCC1-202ENST00000425518 DPH3Q96FX2 82 aa5.07□□□□□ -1.6
SMARCC1-202ENST00000425518 C6orf48Q9UBA6 75 aa5.07□□□□□ -1.6
SMARCC1-202ENST00000425518 Q8NAQ8 132 aa5.06□□□□□ -1.6
SMARCC1-202ENST00000425518 SCXQ7RTU7 201 aa5.06□□□□□ -1.6
SMARCC1-202ENST00000425518 DIRC1Q969H9 104 aa5.06□□□□□ -1.6
SMARCC1-202ENST00000425518 MIFP14174 115 aa5.05□□□□□ -1.6
SMARCC1-202ENST00000425518 LINC01547P58512 204 aaPredicted RBP5.05□□□□□ -1.6
SMARCC1-202ENST00000425518 LYPD5Q6UWN5 251 aa5.05□□□□□ -1.6
SMARCC1-202ENST00000425518 Q6ZVQ6 151 aa5.05□□□□□ -1.6
SMARCC1-202ENST00000425518 CAMK2N2Q96S95 79 aa5.05□□□□□ -1.6
SMARCC1-202ENST00000425518 ZNF73O43830 326 aaPredicted RBP5.05□□□□□ -1.6
SMARCC1-202ENST00000425518 COX7BP24311 80 aa5.05□□□□□ -1.6
SMARCC1-202ENST00000425518 PRR34Q9NV39 138 aa5.04□□□□□ -1.6
SMARCC1-202ENST00000425518 TRRAPQ9Y4A5 3859 aa5.04□□□□□ -1.6
SMARCC1-202ENST00000425518 HIVEP1P15822 2718 aa5.04□□□□□ -1.6
SMARCC1-202ENST00000425518 LOC110117498A0A087WWA1 95 aa5.04□□□□□ -1.6
SMARCC1-202ENST00000425518 RPS28P62857 69 aaKnown RBP5.04□□□□□ -1.6
SMARCC1-202ENST00000425518 TRAV10A0A0B4J240 114 aa5.04□□□□□ -1.6
SMARCC1-202ENST00000425518 INAFM1C9JVW0 142 aa5.04□□□□□ -1.6
SMARCC1-202ENST00000425518 WFDC10BQ8IUB3 73 aa5.03□□□□□ -1.6
SMARCC1-202ENST00000425518 MUC7Q8TAX7 377 aa5.03□□□□□ -1.6
SMARCC1-202ENST00000425518 OTOGQ6ZRI0 2925 aa5.03□□□□□ -1.6
SMARCC1-202ENST00000425518 OXTP01178 125 aa5.02□□□□□ -1.61
SMARCC1-202ENST00000425518 SNURFQ9Y675 71 aa5.02□□□□□ -1.61
SMARCC1-202ENST00000425518 PDE6GP18545 87 aa5.02□□□□□ -1.61
SMARCC1-202ENST00000425518 Q6ZRU5 148 aa5.02□□□□□ -1.61
SMARCC1-202ENST00000425518 RETNQ9HD89 108 aa5.02□□□□□ -1.61
SMARCC1-202ENST00000425518 GVQW2A0A096LPI5 108 aaPredicted RBP5.01□□□□□ -1.61
SMARCC1-202ENST00000425518 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.01□□□□□ -1.61
SMARCC1-202ENST00000425518 PKD1L1Q8TDX9 2849 aa5.01□□□□□ -1.61
SMARCC1-202ENST00000425518 KPRPQ5T749 579 aaPredicted RBP5.01□□□□□ -1.61
SMARCC1-202ENST00000425518 NSD1Q96L73 2696 aaPredicted RBP5.01□□□□□ -1.61
SMARCC1-202ENST00000425518 TRAV7A0A075B6U4 112 aa5□□□□□ -1.61
SMARCC1-202ENST00000425518 VPREB1P12018 145 aa5□□□□□ -1.61
SMARCC1-202ENST00000425518 DEFB105AQ8NG35 78 aa5□□□□□ -1.61
SMARCC1-202ENST00000425518 ELOF1P60002 83 aaKnown RBP5□□□□□ -1.61
SMARCC1-202ENST00000425518 M0R378 163 aa5□□□□□ -1.61
SMARCC1-202ENST00000425518 IGKV2D-24A0A075B6R9 120 aa4.99□□□□□ -1.61
SMARCC1-202ENST00000425518 RMI2Q96E14 147 aa4.99□□□□□ -1.61
SMARCC1-202ENST00000425518 TRBV7-4A0A0J9YYF1 115 aa4.99□□□□□ -1.61
SMARCC1-202ENST00000425518 H3BQ85 93 aa4.99□□□□□ -1.61
SMARCC1-202ENST00000425518 C4orf26Q17RF5 130 aa4.99□□□□□ -1.61
SMARCC1-202ENST00000425518 Q8N9L7 120 aa4.99□□□□□ -1.61
SMARCC1-202ENST00000425518 FAM236DA0A1B0GTK5 79 aa4.99□□□□□ -1.61
SMARCC1-202ENST00000425518 FAM236CP0DP71 79 aa4.99□□□□□ -1.61
SMARCC1-202ENST00000425518 EGFEM1PQ0D2K5 195 aa4.99□□□□□ -1.61
SMARCC1-202ENST00000425518 Q6ZTC4 211 aa4.99□□□□□ -1.61
SMARCC1-202ENST00000425518 NDUFC2-KCTD14E9PQ53 114 aa4.98□□□□□ -1.61
SMARCC1-202ENST00000425518 CXCL6P80162 114 aa4.98□□□□□ -1.61
SMARCC1-202ENST00000425518 OXLD1Q5BKU9 147 aa4.98□□□□□ -1.61
SMARCC1-202ENST00000425518 C1orf43Q9BWL3 253 aa4.98□□□□□ -1.61
SMARCC1-202ENST00000425518 C5orf47Q569G3 176 aa4.98□□□□□ -1.61
SMARCC1-202ENST00000425518 TM2D3Q9BRN9 247 aa4.98□□□□□ -1.61
SMARCC1-202ENST00000425518 STAB1Q9NY15 2570 aa4.97□□□□□ -1.61
SMARCC1-202ENST00000425518 ESRGQ1W209 222 aa4.97□□□□□ -1.61
SMARCC1-202ENST00000425518 Q6ZRP5 223 aa4.97□□□□□ -1.61
SMARCC1-202ENST00000425518 C15orf56Q8N910 161 aa4.97□□□□□ -1.61
SMARCC1-202ENST00000425518 H7BZZ5 65 aa4.97□□□□□ -1.61
SMARCC1-202ENST00000425518 HRCT1Q6UXD1 115 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms