RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 C9orf163Q8N9P6 203 aa6.72□□□□□ -1.33
MDC1-205ENST00000425072 LINC00308Q8TCZ7 52 aa6.71□□□□□ -1.34
MDC1-205ENST00000425072 DAND5Q8N907 189 aa6.7□□□□□ -1.34
MDC1-205ENST00000425072 SND1-IT1Q9HBX3 110 aa6.7□□□□□ -1.34
MDC1-205ENST00000425072 A6NDN8 102 aa6.69□□□□□ -1.34
MDC1-205ENST00000425072 HINT1P49773 126 aaPredicted RBP6.69□□□□□ -1.34
MDC1-205ENST00000425072 BVES-AS1Q5T3Y7 98 aa6.69□□□□□ -1.34
MDC1-205ENST00000425072 LINC00474Q9P2X8 69 aa6.69□□□□□ -1.34
MDC1-205ENST00000425072 NDUFC2O95298 119 aa6.68□□□□□ -1.34
MDC1-205ENST00000425072 GAGE2BQ13066 116 aa6.68□□□□□ -1.34
MDC1-205ENST00000425072 GAGE2EQ4V326 116 aa6.68□□□□□ -1.34
MDC1-205ENST00000425072 GAGE2DQ9UEU5 116 aa6.68□□□□□ -1.34
MDC1-205ENST00000425072 IGLV5-52A0A0A0MRZ9 124 aa6.67□□□□□ -1.34
MDC1-205ENST00000425072 A4D1N5 150 aa6.67□□□□□ -1.34
MDC1-205ENST00000425072 C16orf90A8MZG2 172 aa6.67□□□□□ -1.34
MDC1-205ENST00000425072 NPC2P61916 151 aa6.67□□□□□ -1.34
MDC1-205ENST00000425072 RPL18AQ02543 176 aaKnown RBP6.67□□□□□ -1.34
MDC1-205ENST00000425072 Q6ZRP5 223 aa6.67□□□□□ -1.34
MDC1-205ENST00000425072 DPH3Q96FX2 82 aa6.67□□□□□ -1.34
MDC1-205ENST00000425072 ALMS1Q8TCU4 4167 aa6.66□□□□□ -1.34
MDC1-205ENST00000425072 SDIM1Q6ZPB5 146 aa6.66□□□□□ -1.34
MDC1-205ENST00000425072 PLA2G2DQ9UNK4 145 aa6.66□□□□□ -1.34
MDC1-205ENST00000425072 TRAV13-2A0A0B4J235 113 aa6.65□□□□□ -1.34
MDC1-205ENST00000425072 FXYD2P54710 66 aa6.65□□□□□ -1.34
MDC1-205ENST00000425072 BATFQ16520 125 aa6.65□□□□□ -1.34
MDC1-205ENST00000425072 SOSTDC1Q6X4U4 206 aa6.65□□□□□ -1.34
MDC1-205ENST00000425072 RAB37Q96AX2 223 aa6.65□□□□□ -1.34
MDC1-205ENST00000425072 XAGE1AQ9HD64 81 aa6.65□□□□□ -1.34
MDC1-205ENST00000425072 KMT2AQ03164 3969 aa6.65□□□□□ -1.35
MDC1-205ENST00000425072 TRBV10-2A0A0K0K1G8 114 aa6.64□□□□□ -1.35
MDC1-205ENST00000425072 CFC1BP0CG36 223 aa6.64□□□□□ -1.35
MDC1-205ENST00000425072 CFC1P0CG37 223 aa6.64□□□□□ -1.35
MDC1-205ENST00000425072 LBHQ53QV2 105 aaPredicted RBP6.64□□□□□ -1.35
MDC1-205ENST00000425072 NHP2Q9NX24 153 aaKnown RBP6.64□□□□□ -1.35
MDC1-205ENST00000425072 HECTD4Q9Y4D8 3996 aa6.64□□□□□ -1.35
MDC1-205ENST00000425072 DNAH6Q9C0G6 4158 aa6.63□□□□□ -1.35
MDC1-205ENST00000425072 A0A0B4J2C4 111 aa6.63□□□□□ -1.35
MDC1-205ENST00000425072 COL5A1-AS1Q5SY13 56 aa6.63□□□□□ -1.35
MDC1-205ENST00000425072 SNHG12Q9BXW3 62 aa6.63□□□□□ -1.35
MDC1-205ENST00000425072 PRO1854Q9UHT4 67 aa6.63□□□□□ -1.35
MDC1-205ENST00000425072 CBY1Q9Y3M2 126 aa6.63□□□□□ -1.35
MDC1-205ENST00000425072 A0A1B0GWB2 263 aa6.62□□□□□ -1.35
MDC1-205ENST00000425072 M0R378 163 aa6.62□□□□□ -1.35
MDC1-205ENST00000425072 C9orf129Q5T035 196 aaKnown RBP6.62□□□□□ -1.35
MDC1-205ENST00000425072 KIAA1109Q2LD37 5005 aa6.62□□□□□ -1.35
MDC1-205ENST00000425072 A0A096LNI7 61 aa6.61□□□□□ -1.35
MDC1-205ENST00000425072 IGKV2-24A0A0C4DH68 120 aa6.61□□□□□ -1.35
MDC1-205ENST00000425072 S100A7L2Q5SY68 101 aa6.61□□□□□ -1.35
MDC1-205ENST00000425072 NKAPP1Q8N9T2 125 aa6.61□□□□□ -1.35
MDC1-205ENST00000425072 OR13C6PQ8NH95 151 aa6.61□□□□□ -1.35
MDC1-205ENST00000425072 TMEM126AQ9H061 195 aa6.61□□□□□ -1.35
MDC1-205ENST00000425072 IGLV5-37A0A075B6J1 123 aa6.6□□□□□ -1.35
MDC1-205ENST00000425072 VPREB1P12018 145 aa6.59□□□□□ -1.35
MDC1-205ENST00000425072 KRTAP10-2P60368 255 aa6.59□□□□□ -1.35
MDC1-205ENST00000425072 PRR3P79522 188 aaKnown RBP6.59□□□□□ -1.35
MDC1-205ENST00000425072 LINC01620Q4KN68 170 aa6.59□□□□□ -1.35
MDC1-205ENST00000425072 DNAH10Q8IVF4 4471 aa6.58□□□□□ -1.36
MDC1-205ENST00000425072 IGKV2-28A0A075B6P5 120 aa6.58□□□□□ -1.36
MDC1-205ENST00000425072 IGKV2D-28P01615 120 aa6.58□□□□□ -1.36
MDC1-205ENST00000425072 C22orf24Q9Y442 160 aa6.58□□□□□ -1.36
MDC1-205ENST00000425072 COX6CP09669 75 aa6.57□□□□□ -1.36
MDC1-205ENST00000425072 Q1RN00 199 aa6.57□□□□□ -1.36
MDC1-205ENST00000425072 LINC00337Q8N6G1 96 aa6.57□□□□□ -1.36
MDC1-205ENST00000425072 ABCA13Q86UQ4 5058 aa6.57□□□□□ -1.36
MDC1-205ENST00000425072 DNAH2Q9P225 4427 aa6.56□□□□□ -1.36
MDC1-205ENST00000425072 A0A1W2PNN7 141 aa6.56□□□□□ -1.36
MDC1-205ENST00000425072 NCR3O14931 201 aa6.56□□□□□ -1.36
MDC1-205ENST00000425072 VAMP3Q15836 100 aa6.56□□□□□ -1.36
MDC1-205ENST00000425072 SERTAD4-AS1Q5TG53 156 aa6.56□□□□□ -1.36
MDC1-205ENST00000425072 MRPL55Q7Z7F7 128 aaKnown RBP6.56□□□□□ -1.36
MDC1-205ENST00000425072 SPACA4Q8TDM5 124 aa6.56□□□□□ -1.36
MDC1-205ENST00000425072 FAM168BA1KXE4 195 aa6.55□□□□□ -1.36
MDC1-205ENST00000425072 C9orf118A6NHY6 69 aa6.55□□□□□ -1.36
MDC1-205ENST00000425072 H3BS24 57 aa6.55□□□□□ -1.36
MDC1-205ENST00000425072 K7ERJ3 54 aa6.55□□□□□ -1.36
MDC1-205ENST00000425072 IGLV6-57P01721 117 aa6.55□□□□□ -1.36
MDC1-205ENST00000425072 CHTF8P0CG12 524 aa6.55□□□□□ -1.36
MDC1-205ENST00000425072 FUSP35637 526 aaKnown RBP eCLIP6.55□□□□□ -1.36
MDC1-205ENST00000425072 RPL13AP40429 203 aaKnown RBP6.55□□□□□ -1.36
MDC1-205ENST00000425072 PSMB2P49721 201 aa6.55□□□□□ -1.36
MDC1-205ENST00000425072 FAM19A5Q7Z5A7 132 aaPredicted RBP6.55□□□□□ -1.36
MDC1-205ENST00000425072 LINC00167Q96N53 147 aa6.55□□□□□ -1.36
MDC1-205ENST00000425072 DNAH17Q9UFH2 4485 aa6.54□□□□□ -1.36
MDC1-205ENST00000425072 A0A087WYN8 130 aa6.54□□□□□ -1.36
MDC1-205ENST00000425072 A0A1B0GVY2 172 aa6.54□□□□□ -1.36
MDC1-205ENST00000425072 EPM2AB3EWF7 344 aa6.54□□□□□ -1.36
MDC1-205ENST00000425072 H7C2G1 150 aa6.54□□□□□ -1.36
MDC1-205ENST00000425072 TAX1BP3O14907 124 aa6.54□□□□□ -1.36
MDC1-205ENST00000425072 SCGB1C2P0DMR2 95 aa6.54□□□□□ -1.36
MDC1-205ENST00000425072 Q8NDZ9 215 aa6.54□□□□□ -1.36
MDC1-205ENST00000425072 C7orf33Q8WU49 177 aa6.54□□□□□ -1.36
MDC1-205ENST00000425072 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.54□□□□□ -1.36
MDC1-205ENST00000425072 UBR4Q5T4S7 5183 aa6.54□□□□□ -1.36
MDC1-205ENST00000425072 IGLV1-50A0A075B6I6 118 aa6.53□□□□□ -1.36
MDC1-205ENST00000425072 TRBV10-3A0A0K0K1G6 114 aa6.53□□□□□ -1.36
MDC1-205ENST00000425072 H0YGX0 51 aa6.53□□□□□ -1.36
MDC1-205ENST00000425072 M0QXV9 152 aa6.53□□□□□ -1.36
MDC1-205ENST00000425072 SNCGO76070 127 aa6.53□□□□□ -1.36
MDC1-205ENST00000425072 RPL28P46779 137 aaKnown RBP6.53□□□□□ -1.36
MDC1-205ENST00000425072 LYRM7Q5U5X0 104 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms