RNA–Protein interactions for RNA: ENST00000422611.6

SLC12A4-202, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 4,670 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-202ENST00000422611 SPTSSBQ8NFR3 76 aa13.29□□□□□ -0.28
SLC12A4-202ENST00000422611 KALRNO60229 2985 aa13.28□□□□□ -0.28
SLC12A4-202ENST00000422611 A0A0J9YWU9 116 aa13.28□□□□□ -0.28
SLC12A4-202ENST00000422611 OXLD1Q5BKU9 147 aa13.28□□□□□ -0.28
SLC12A4-202ENST00000422611 DHRS4-AS1Q9P1J3 65 aa13.28□□□□□ -0.28
SLC12A4-202ENST00000422611 C4orf26Q17RF5 130 aa13.27□□□□□ -0.28
SLC12A4-202ENST00000422611 REV3LO60673 3130 aa13.27□□□□□ -0.29
SLC12A4-202ENST00000422611 ADGRG4Q8IZF6 3080 aa13.27□□□□□ -0.29
SLC12A4-202ENST00000422611 AKAP13Q12802 2813 aa13.26□□□□□ -0.29
SLC12A4-202ENST00000422611 TMEM254Q8TBM7 123 aa13.26□□□□□ -0.29
SLC12A4-202ENST00000422611 NANOS2P60321 138 aaKnown RBP13.26□□□□□ -0.29
SLC12A4-202ENST00000422611 SPTBN5Q9NRC6 3674 aaKnown RBP13.25□□□□□ -0.29
SLC12A4-202ENST00000422611 COL6A3P12111 3177 aa13.25□□□□□ -0.29
SLC12A4-202ENST00000422611 C1orf137Q5JT78 98 aa13.25□□□□□ -0.29
SLC12A4-202ENST00000422611 SPATA3Q8NHX4 192 aa13.24□□□□□ -0.29
SLC12A4-202ENST00000422611 PRYO14603 147 aa13.23□□□□□ -0.29
SLC12A4-202ENST00000422611 Q6ZRU5 148 aa13.23□□□□□ -0.29
SLC12A4-202ENST00000422611 Q6ZTC4 211 aa13.22□□□□□ -0.29
SLC12A4-202ENST00000422611 LINC01561Q8N1V8 128 aa13.21□□□□□ -0.29
SLC12A4-202ENST00000422611 C9orf129Q5T035 196 aaKnown RBP13.2□□□□□ -0.3
SLC12A4-202ENST00000422611 LYPD5Q6UWN5 251 aa13.2□□□□□ -0.3
SLC12A4-202ENST00000422611 TRAV10A0A0B4J240 114 aa13.19□□□□□ -0.3
SLC12A4-202ENST00000422611 TRBV7-6A0A0J9YX20 115 aa13.19□□□□□ -0.3
SLC12A4-202ENST00000422611 IGKV4-1P06312 121 aa13.19□□□□□ -0.3
SLC12A4-202ENST00000422611 Q6ZQT0 140 aa13.18□□□□□ -0.3
SLC12A4-202ENST00000422611 RPS28P62857 69 aaKnown RBP13.18□□□□□ -0.3
SLC12A4-202ENST00000422611 DEFB116Q30KQ4 102 aa13.18□□□□□ -0.3
SLC12A4-202ENST00000422611 USP24Q9UPU5 2620 aa13.18□□□□□ -0.3
SLC12A4-202ENST00000422611 B9D2Q9BPU9 175 aa13.18□□□□□ -0.3
SLC12A4-202ENST00000422611 C16orf95Q9H693 158 aa13.18□□□□□ -0.3
SLC12A4-202ENST00000422611 CXCL6P80162 114 aa13.17□□□□□ -0.3
SLC12A4-202ENST00000422611 C6orf48Q9UBA6 75 aa13.16□□□□□ -0.3
SLC12A4-202ENST00000422611 C1orf195Q5TG92 126 aa13.15□□□□□ -0.3
SLC12A4-202ENST00000422611 FLNAP21333 2647 aaKnown RBP13.14□□□□□ -0.31
SLC12A4-202ENST00000422611 V9GYY9 64 aa13.14□□□□□ -0.31
SLC12A4-202ENST00000422611 X6R8D5 127 aa13.14□□□□□ -0.31
SLC12A4-202ENST00000422611 CHKB-CPT1BH3BT56 60 aa13.13□□□□□ -0.31
SLC12A4-202ENST00000422611 LINC00208Q96KT6 92 aa13.13□□□□□ -0.31
SLC12A4-202ENST00000422611 TM2D3Q9BRN9 247 aa13.12□□□□□ -0.31
SLC12A4-202ENST00000422611 CFAP47Q6ZTR5 3102 aa13.12□□□□□ -0.31
SLC12A4-202ENST00000422611 TACC2O95359 2948 aa13.11□□□□□ -0.31
SLC12A4-202ENST00000422611 PSPHP1O15172 72 aa13.1□□□□□ -0.31
SLC12A4-202ENST00000422611 FSHBP01225 129 aa13.09□□□□□ -0.31
SLC12A4-202ENST00000422611 KIAA0087Q14695 138 aa13.09□□□□□ -0.31
SLC12A4-202ENST00000422611 FAM104AQ969W3 186 aa13.09□□□□□ -0.31
SLC12A4-202ENST00000422611 HECTD1Q9ULT8 2610 aa13.09□□□□□ -0.31
SLC12A4-202ENST00000422611 CHD6Q8TD26 2715 aa13.08□□□□□ -0.32
SLC12A4-202ENST00000422611 USP34Q70CQ2 3546 aa13.08□□□□□ -0.32
SLC12A4-202ENST00000422611 A0A087WSZ3 146 aa13.07□□□□□ -0.32
SLC12A4-202ENST00000422611 SMIM29Q86T20 159 aa13.07□□□□□ -0.32
SLC12A4-202ENST00000422611 C2orf48Q96LS8 159 aa13.06□□□□□ -0.32
SLC12A4-202ENST00000422611 LOC110117498A0A087WWA1 95 aa13.05□□□□□ -0.32
SLC12A4-202ENST00000422611 GIG44P09565 113 aaPredicted RBP13.04□□□□□ -0.32
SLC12A4-202ENST00000422611 ESRGQ1W209 222 aa13.04□□□□□ -0.32
SLC12A4-202ENST00000422611 C7orf33Q8WU49 177 aa13.04□□□□□ -0.32
SLC12A4-202ENST00000422611 ELOF1P60002 83 aaKnown RBP13.03□□□□□ -0.32
SLC12A4-202ENST00000422611 A6NED7 52 aa13.03□□□□□ -0.32
SLC12A4-202ENST00000422611 REG3GQ6UW15 175 aa13.03□□□□□ -0.32
SLC12A4-202ENST00000422611 ITPR3Q14573 2671 aa13.03□□□□□ -0.32
SLC12A4-202ENST00000422611 C14orf177Q52M58 125 aa13.03□□□□□ -0.32
SLC12A4-202ENST00000422611 IGLV9-49A0A0B4J1Y8 123 aa13.01□□□□□ -0.33
SLC12A4-202ENST00000422611 PLAC8L1A1L4L8 177 aa13.01□□□□□ -0.33
SLC12A4-202ENST00000422611 CSNK1G2-AS1Q8NCQ2 148 aa13.01□□□□□ -0.33
SLC12A4-202ENST00000422611 IL17DQ8TAD2 202 aa13.01□□□□□ -0.33
SLC12A4-202ENST00000422611 SPINK6Q6UWN8 80 aa13.01□□□□□ -0.33
SLC12A4-202ENST00000422611 PRO0628Q9UI54 55 aa13.01□□□□□ -0.33
SLC12A4-202ENST00000422611 ATMQ13315 3056 aa13.01□□□□□ -0.33
SLC12A4-202ENST00000422611 MRPL55Q7Z7F7 128 aaKnown RBP13□□□□□ -0.33
SLC12A4-202ENST00000422611 PRLHP81277 87 aa13□□□□□ -0.33
SLC12A4-202ENST00000422611 FLNBO75369 2602 aaKnown RBP13□□□□□ -0.33
SLC12A4-202ENST00000422611 LRBAP50851 2863 aa12.99□□□□□ -0.33
SLC12A4-202ENST00000422611 DMXL2Q8TDJ6 3036 aa12.99□□□□□ -0.33
SLC12A4-202ENST00000422611 BCE1O60756 84 aa12.97□□□□□ -0.33
SLC12A4-202ENST00000422611 ATRQ13535 2644 aa12.97□□□□□ -0.33
SLC12A4-202ENST00000422611 IGLV6-57P01721 117 aa12.97□□□□□ -0.33
SLC12A4-202ENST00000422611 C22orf24Q9Y442 160 aa12.96□□□□□ -0.33
SLC12A4-202ENST00000422611 LOC400499M0QZD8 3231 aa12.96□□□□□ -0.34
SLC12A4-202ENST00000422611 LINC01600Q96MT4 127 aa12.95□□□□□ -0.34
SLC12A4-202ENST00000422611 HCG22E2RYF7 251 aa12.95□□□□□ -0.34
SLC12A4-202ENST00000422611 A0A096LNT2 108 aa12.95□□□□□ -0.34
SLC12A4-202ENST00000422611 CASC2Q6XLA1 102 aa12.95□□□□□ -0.34
SLC12A4-202ENST00000422611 Q9BRP9 147 aa12.94□□□□□ -0.34
SLC12A4-202ENST00000422611 PRR15LQ9BU68 103 aa12.94□□□□□ -0.34
SLC12A4-202ENST00000422611 GCN1Q92616 2671 aaKnown RBP12.93□□□□□ -0.34
SLC12A4-202ENST00000422611 M0R2N4 97 aa12.93□□□□□ -0.34
SLC12A4-202ENST00000422611 LINC00167Q96N53 147 aa12.93□□□□□ -0.34
SLC12A4-202ENST00000422611 PCOTHQ58A44 107 aa12.92□□□□□ -0.34
SLC12A4-202ENST00000422611 PMAIP1Q13794 54 aa12.92□□□□□ -0.34
SLC12A4-202ENST00000422611 CFAP46Q8IYW2 2715 aa12.92□□□□□ -0.34
SLC12A4-202ENST00000422611 ST20-AS1Q8NBB2 130 aa12.91□□□□□ -0.34
SLC12A4-202ENST00000422611 C19orf73Q9NVV2 129 aa12.91□□□□□ -0.34
SLC12A4-202ENST00000422611 Q8NAQ8 132 aa12.91□□□□□ -0.34
SLC12A4-202ENST00000422611 VPREB1P12018 145 aa12.9□□□□□ -0.34
SLC12A4-202ENST00000422611 H0Y9P7 68 aa12.9□□□□□ -0.34
SLC12A4-202ENST00000422611 LINC00474Q9P2X8 69 aa12.9□□□□□ -0.34
SLC12A4-202ENST00000422611 Q6ZRP5 223 aa12.89□□□□□ -0.35
SLC12A4-202ENST00000422611 WDFY3Q8IZQ1 3526 aa12.88□□□□□ -0.35
SLC12A4-202ENST00000422611 MGAM2Q2M2H8 2515 aa12.87□□□□□ -0.35
SLC12A4-202ENST00000422611 NBEAL2Q6ZNJ1 2754 aa12.85□□□□□ -0.35
SLC12A4-202ENST00000422611 H7BZZ5 65 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms