RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 RPL13AP40429 203 aaKnown RBP10.79□□□□□ -0.68
UBXN11-208ENST00000421827 A0A0U1RRA0 63 aa10.77□□□□□ -0.69
UBXN11-208ENST00000421827 UBE2AP49459 152 aa10.77□□□□□ -0.69
UBXN11-208ENST00000421827 Q8NDZ9 215 aa10.77□□□□□ -0.69
UBXN11-208ENST00000421827 HSPB8Q9UJY1 196 aa10.77□□□□□ -0.69
UBXN11-208ENST00000421827 KRTAP13-1Q8IUC0 172 aa10.76□□□□□ -0.69
UBXN11-208ENST00000421827 SMIM13P0DJ93 91 aa10.75□□□□□ -0.69
UBXN11-208ENST00000421827 FABP4P15090 132 aa10.75□□□□□ -0.69
UBXN11-208ENST00000421827 HERV-K104P63124 156 aa10.75□□□□□ -0.69
UBXN11-208ENST00000421827 MEIG1Q5JSS6 88 aa10.75□□□□□ -0.69
UBXN11-208ENST00000421827 ATP6V1G1O75348 118 aa10.74□□□□□ -0.69
UBXN11-208ENST00000421827 PLNP26678 52 aa10.74□□□□□ -0.69
UBXN11-208ENST00000421827 TMEM126AQ9H061 195 aa10.74□□□□□ -0.69
UBXN11-208ENST00000421827 NDUFA12Q9UI09 145 aa10.74□□□□□ -0.69
UBXN11-208ENST00000421827 MYMXA0A1B0GTQ4 84 aa10.73□□□□□ -0.69
UBXN11-208ENST00000421827 TMEM238C9JI98 176 aa10.73□□□□□ -0.69
UBXN11-208ENST00000421827 LINC00587B1AMM8 73 aa10.72□□□□□ -0.69
UBXN11-208ENST00000421827 M0R378 163 aa10.71□□□□□ -0.69
UBXN11-208ENST00000421827 LEPROTO15243 131 aa10.71□□□□□ -0.69
UBXN11-208ENST00000421827 DPM2O94777 84 aa10.71□□□□□ -0.69
UBXN11-208ENST00000421827 FAM19A1Q7Z5A9 133 aa10.71□□□□□ -0.69
UBXN11-208ENST00000421827 PLEKHB2Q96CS7 222 aa10.71□□□□□ -0.69
UBXN11-208ENST00000421827 A0A087X002 238 aa10.7□□□□□ -0.7
UBXN11-208ENST00000421827 CRYGAP11844 174 aa10.7□□□□□ -0.7
UBXN11-208ENST00000421827 TSPEAR-AS2P59090 65 aa10.7□□□□□ -0.7
UBXN11-208ENST00000421827 PRLHP81277 87 aa10.7□□□□□ -0.7
UBXN11-208ENST00000421827 MIR7-3HGQ8N6C7 128 aa10.7□□□□□ -0.7
UBXN11-208ENST00000421827 IGKCP01834 107 aa10.69□□□□□ -0.7
UBXN11-208ENST00000421827 BOD1L2Q8IYS8 172 aa10.69□□□□□ -0.7
UBXN11-208ENST00000421827 PMCHL2Q9BQD1 86 aa10.69□□□□□ -0.7
UBXN11-208ENST00000421827 MAP1LC3CQ9BXW4 147 aa10.69□□□□□ -0.7
UBXN11-208ENST00000421827 HERVK_113P61574 105 aa10.68□□□□□ -0.7
UBXN11-208ENST00000421827 ANAPC11Q9NYG5 84 aa10.68□□□□□ -0.7
UBXN11-208ENST00000421827 J3QQQ9 107 aa10.67□□□□□ -0.7
UBXN11-208ENST00000421827 HIST1H2BKO60814 126 aa10.66□□□□□ -0.7
UBXN11-208ENST00000421827 HIST1H2BJP06899 126 aa10.66□□□□□ -0.7
UBXN11-208ENST00000421827 HIST1H2BOP23527 126 aa10.66□□□□□ -0.7
UBXN11-208ENST00000421827 HIST1H2BBP33778 126 aa10.66□□□□□ -0.7
UBXN11-208ENST00000421827 HIST1H2BDP58876 126 aa10.66□□□□□ -0.7
UBXN11-208ENST00000421827 HIST1H2BCP62807 126 aa10.66□□□□□ -0.7
UBXN11-208ENST00000421827 HIST2H2BEQ16778 126 aa10.66□□□□□ -0.7
UBXN11-208ENST00000421827 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.66□□□□□ -0.7
UBXN11-208ENST00000421827 TYMSOSQ8TAI1 123 aa10.66□□□□□ -0.7
UBXN11-208ENST00000421827 HIST1H2BHQ93079 126 aa10.66□□□□□ -0.7
UBXN11-208ENST00000421827 HIST1H2BNQ99877 126 aa10.66□□□□□ -0.7
UBXN11-208ENST00000421827 HIST1H2BMQ99879 126 aa10.66□□□□□ -0.7
UBXN11-208ENST00000421827 NMUP48645 174 aa10.65□□□□□ -0.7
UBXN11-208ENST00000421827 NCR3O14931 201 aa10.64□□□□□ -0.71
UBXN11-208ENST00000421827 FAM229BQ4G0N7 80 aa10.64□□□□□ -0.71
UBXN11-208ENST00000421827 IGKV2D-26A0A0A0MRZ7 120 aa10.63□□□□□ -0.71
UBXN11-208ENST00000421827 LGALS3P17931 250 aaKnown RBP10.63□□□□□ -0.71
UBXN11-208ENST00000421827 PRYO14603 147 aa10.62□□□□□ -0.71
UBXN11-208ENST00000421827 KRTAP13-2Q52LG2 175 aa10.62□□□□□ -0.71
UBXN11-208ENST00000421827 DAND5Q8N907 189 aa10.62□□□□□ -0.71
UBXN11-208ENST00000421827 LOC107984156A0A0G2JMH3 177 aa10.61□□□□□ -0.71
UBXN11-208ENST00000421827 ARL17AQ8IVW1 177 aa10.61□□□□□ -0.71
UBXN11-208ENST00000421827 HIGD2AQ9BW72 106 aa10.61□□□□□ -0.71
UBXN11-208ENST00000421827 LPAP08519 4548 aa10.6□□□□□ -0.71
UBXN11-208ENST00000421827 SYS1-DBNDD2H3BUS1 97 aa10.6□□□□□ -0.71
UBXN11-208ENST00000421827 TSPAN13O95857 204 aa10.6□□□□□ -0.71
UBXN11-208ENST00000421827 KCNQ1DNQ9H478 68 aa10.6□□□□□ -0.71
UBXN11-208ENST00000421827 RNF213Q63HN8 5207 aa10.6□□□□□ -0.71
UBXN11-208ENST00000421827 TRBV10-3A0A0K0K1G6 114 aa10.58□□□□□ -0.72
UBXN11-208ENST00000421827 E9PLD3 99 aa10.58□□□□□ -0.72
UBXN11-208ENST00000421827 PRR4Q16378 134 aa10.58□□□□□ -0.72
UBXN11-208ENST00000421827 SPRR1AP35321 89 aa10.57□□□□□ -0.72
UBXN11-208ENST00000421827 LINC00337Q8N6G1 96 aa10.57□□□□□ -0.72
UBXN11-208ENST00000421827 TRBV10-2A0A0K0K1G8 114 aa10.56□□□□□ -0.72
UBXN11-208ENST00000421827 MIEN1Q9BRT3 115 aa10.56□□□□□ -0.72
UBXN11-208ENST00000421827 A0A0J9YXY3 114 aa10.55□□□□□ -0.72
UBXN11-208ENST00000421827 ETDCA0A1B0GVM5 59 aa10.55□□□□□ -0.72
UBXN11-208ENST00000421827 S100A12P80511 92 aa10.55□□□□□ -0.72
UBXN11-208ENST00000421827 LINC01545Q5VT33 79 aa10.55□□□□□ -0.72
UBXN11-208ENST00000421827 PET117Q6UWS5 81 aa10.55□□□□□ -0.72
UBXN11-208ENST00000421827 KRTAP4-16G5E9R7 235 aaPredicted RBP10.54□□□□□ -0.72
UBXN11-208ENST00000421827 DDTP30046 118 aa10.54□□□□□ -0.72
UBXN11-208ENST00000421827 LINC00304Q8N9R0 145 aa10.54□□□□□ -0.72
UBXN11-208ENST00000421827 SPRR4Q96PI1 79 aa10.54□□□□□ -0.72
UBXN11-208ENST00000421827 SPANXB1Q9NS25 103 aaPredicted RBP10.54□□□□□ -0.72
UBXN11-208ENST00000421827 NDUFC2O95298 119 aa10.53□□□□□ -0.72
UBXN11-208ENST00000421827 COA6Q5JTJ3 125 aaKnown RBP10.53□□□□□ -0.72
UBXN11-208ENST00000421827 ZNF706Q9Y5V0 76 aaPredicted RBP10.53□□□□□ -0.72
UBXN11-208ENST00000421827 ADAMTSL4-AS1Q5T5F5 129 aa10.52□□□□□ -0.73
UBXN11-208ENST00000421827 C3orf79P0CE67 100 aa10.51□□□□□ -0.73
UBXN11-208ENST00000421827 NPC2P61916 151 aa10.5□□□□□ -0.73
UBXN11-208ENST00000421827 SOSTDC1Q6X4U4 206 aa10.5□□□□□ -0.73
UBXN11-208ENST00000421827 C3orf22Q8N5N4 141 aa10.5□□□□□ -0.73
UBXN11-208ENST00000421827 SMCR5Q8TEV8 140 aa10.5□□□□□ -0.73
UBXN11-208ENST00000421827 B5MCH6 92 aa10.49□□□□□ -0.73
UBXN11-208ENST00000421827 EIF4EBP3O60516 100 aaPredicted RBP10.49□□□□□ -0.73
UBXN11-208ENST00000421827 S100A7L2Q5SY68 101 aa10.49□□□□□ -0.73
UBXN11-208ENST00000421827 IGLV6-57P01721 117 aa10.48□□□□□ -0.73
UBXN11-208ENST00000421827 KRTDAPP60985 99 aa10.47□□□□□ -0.73
UBXN11-208ENST00000421827 CTAG1AP78358 180 aa10.46□□□□□ -0.73
UBXN11-208ENST00000421827 LITAFQ99732 161 aa10.46□□□□□ -0.73
UBXN11-208ENST00000421827 ZNF815PA8K554 130 aa10.45□□□□□ -0.74
UBXN11-208ENST00000421827 TIMM17BO60830 172 aa10.45□□□□□ -0.74
UBXN11-208ENST00000421827 TRAV23DV6A0A075B6W5 121 aa10.44□□□□□ -0.74
UBXN11-208ENST00000421827 Q6ZRX8 168 aa10.44□□□□□ -0.74
UBXN11-208ENST00000421827 LINC00308Q8TCZ7 52 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms