RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 A0A087WYN8 130 aa8.11□□□□□ -1.11
ATG4B-208ENST00000419606 LINC00587B1AMM8 73 aa8.11□□□□□ -1.11
ATG4B-208ENST00000419606 SERTAD4-AS1Q5TG53 156 aa8.11□□□□□ -1.11
ATG4B-208ENST00000419606 C2orf91Q6ZV80 131 aa8.11□□□□□ -1.11
ATG4B-208ENST00000419606 DPH3Q96FX2 82 aa8.11□□□□□ -1.11
ATG4B-208ENST00000419606 PKIGQ9Y2B9 76 aa8.11□□□□□ -1.11
ATG4B-208ENST00000419606 XGP55808 180 aa8.1□□□□□ -1.11
ATG4B-208ENST00000419606 SCXQ7RTU7 201 aa8.1□□□□□ -1.11
ATG4B-208ENST00000419606 FAM19A5Q7Z5A7 132 aaPredicted RBP8.1□□□□□ -1.11
ATG4B-208ENST00000419606 LINC00518Q8N0U6 118 aa8.1□□□□□ -1.11
ATG4B-208ENST00000419606 CIRBP-AS1Q8TBR5 109 aa8.1□□□□□ -1.11
ATG4B-208ENST00000419606 SPANXDQ9BXN6 97 aa8.09□□□□□ -1.11
ATG4B-208ENST00000419606 SPANXCQ9NY87 97 aa8.09□□□□□ -1.11
ATG4B-208ENST00000419606 TMEM238C9JI98 176 aa8.08□□□□□ -1.12
ATG4B-208ENST00000419606 PRR3P79522 188 aaKnown RBP8.08□□□□□ -1.12
ATG4B-208ENST00000419606 LINC00308Q8TCZ7 52 aa8.08□□□□□ -1.12
ATG4B-208ENST00000419606 LINC00474Q9P2X8 69 aa8.08□□□□□ -1.12
ATG4B-208ENST00000419606 MUSTN1Q8IVN3 82 aa8.07□□□□□ -1.12
ATG4B-208ENST00000419606 PLAC8Q9NZF1 115 aa8.07□□□□□ -1.12
ATG4B-208ENST00000419606 APOBP04114 4563 aaKnown RBP8.06□□□□□ -1.12
ATG4B-208ENST00000419606 LOC107984156A0A0G2JMH3 177 aa8.06□□□□□ -1.12
ATG4B-208ENST00000419606 EPM2AB3EWF7 344 aa8.06□□□□□ -1.12
ATG4B-208ENST00000419606 VPREB1P12018 145 aa8.06□□□□□ -1.12
ATG4B-208ENST00000419606 PHF5AQ7RTV0 110 aaKnown RBP8.06□□□□□ -1.12
ATG4B-208ENST00000419606 ARL17AQ8IVW1 177 aa8.06□□□□□ -1.12
ATG4B-208ENST00000419606 SPANXB1Q9NS25 103 aaPredicted RBP8.06□□□□□ -1.12
ATG4B-208ENST00000419606 UQCR10Q9UDW1 63 aa8.06□□□□□ -1.12
ATG4B-208ENST00000419606 SRSF9Q13242 221 aaKnown RBP eCLIP8.05□□□□□ -1.12
ATG4B-208ENST00000419606 HIGD1BQ9P298 99 aa8.05□□□□□ -1.12
ATG4B-208ENST00000419606 PLA2G2DQ9UNK4 145 aa8.05□□□□□ -1.12
ATG4B-208ENST00000419606 C22orf24Q9Y442 160 aa8.05□□□□□ -1.12
ATG4B-208ENST00000419606 HIST1H4GQ99525 98 aa8.04□□□□□ -1.12
ATG4B-208ENST00000419606 GAGE10A6NGK3 116 aa8.03□□□□□ -1.12
ATG4B-208ENST00000419606 M0QXV9 152 aa8.03□□□□□ -1.12
ATG4B-208ENST00000419606 NCR3O14931 201 aa8.03□□□□□ -1.12
ATG4B-208ENST00000419606 SMR3BP02814 79 aaPredicted RBP8.03□□□□□ -1.12
ATG4B-208ENST00000419606 KRTAP11-1Q8IUC1 163 aa8.03□□□□□ -1.12
ATG4B-208ENST00000419606 MIEN1Q9BRT3 115 aa8.03□□□□□ -1.12
ATG4B-208ENST00000419606 IGLV5-37A0A075B6J1 123 aa8.02□□□□□ -1.13
ATG4B-208ENST00000419606 IFITM1P13164 125 aa8.02□□□□□ -1.13
ATG4B-208ENST00000419606 Q6ZVH6 145 aa8.02□□□□□ -1.13
ATG4B-208ENST00000419606 IGKV2-28A0A075B6P5 120 aa8.01□□□□□ -1.13
ATG4B-208ENST00000419606 CDK2AP2O75956 126 aa8.01□□□□□ -1.13
ATG4B-208ENST00000419606 IGKV2D-28P01615 120 aa8.01□□□□□ -1.13
ATG4B-208ENST00000419606 HNRNPA3P51991 378 aaKnown RBP8.01□□□□□ -1.13
ATG4B-208ENST00000419606 RPL24P83731 157 aaKnown RBP8.01□□□□□ -1.13
ATG4B-208ENST00000419606 C7orf33Q8WU49 177 aa8.01□□□□□ -1.13
ATG4B-208ENST00000419606 LINC00167Q96N53 147 aa8.01□□□□□ -1.13
ATG4B-208ENST00000419606 MRPL55Q7Z7F7 128 aaKnown RBP8□□□□□ -1.13
ATG4B-208ENST00000419606 NKAPP1Q8N9T2 125 aa8□□□□□ -1.13
ATG4B-208ENST00000419606 A4D1N5 150 aa7.99□□□□□ -1.13
ATG4B-208ENST00000419606 RPL37AP8A6NKH3 93 aa7.99□□□□□ -1.13
ATG4B-208ENST00000419606 NDUFC2O95298 119 aa7.99□□□□□ -1.13
ATG4B-208ENST00000419606 TSTD3H0UI37 97 aa7.98□□□□□ -1.13
ATG4B-208ENST00000419606 M0R378 163 aa7.98□□□□□ -1.13
ATG4B-208ENST00000419606 CEND1Q8N111 149 aa7.98□□□□□ -1.13
ATG4B-208ENST00000419606 FXYD2P54710 66 aa7.97□□□□□ -1.13
ATG4B-208ENST00000419606 CTAG1AP78358 180 aa7.97□□□□□ -1.13
ATG4B-208ENST00000419606 HSD52Q0P140 79 aa7.97□□□□□ -1.13
ATG4B-208ENST00000419606 TAL2Q16559 108 aa7.97□□□□□ -1.13
ATG4B-208ENST00000419606 LINC00337Q8N6G1 96 aa7.97□□□□□ -1.13
ATG4B-208ENST00000419606 PPDPFQ9H3Y8 114 aa7.97□□□□□ -1.13
ATG4B-208ENST00000419606 HSPG2P98160 4391 aa7.96□□□□□ -1.13
ATG4B-208ENST00000419606 TRBV10-3A0A0K0K1G6 114 aa7.96□□□□□ -1.14
ATG4B-208ENST00000419606 UBE2BP63146 152 aa7.96□□□□□ -1.14
ATG4B-208ENST00000419606 LBHQ53QV2 105 aaPredicted RBP7.96□□□□□ -1.14
ATG4B-208ENST00000419606 LINC00528Q8N1L1 170 aa7.96□□□□□ -1.14
ATG4B-208ENST00000419606 COPS9Q8WXC6 57 aa7.96□□□□□ -1.14
ATG4B-208ENST00000419606 IGLV1-50A0A075B6I6 118 aa7.95□□□□□ -1.14
ATG4B-208ENST00000419606 TRBV10-2A0A0K0K1G8 114 aa7.95□□□□□ -1.14
ATG4B-208ENST00000419606 KIAA1109Q2LD37 5005 aa7.94□□□□□ -1.14
ATG4B-208ENST00000419606 PSORS1C2Q9UIG4 136 aa7.94□□□□□ -1.14
ATG4B-208ENST00000419606 RYR1P21817 5038 aa7.94□□□□□ -1.14
ATG4B-208ENST00000419606 IGLV6-57P01721 117 aa7.93□□□□□ -1.14
ATG4B-208ENST00000419606 CFC1BP0CG36 223 aa7.93□□□□□ -1.14
ATG4B-208ENST00000419606 CFC1P0CG37 223 aa7.93□□□□□ -1.14
ATG4B-208ENST00000419606 DDTP30046 118 aa7.93□□□□□ -1.14
ATG4B-208ENST00000419606 OR13C6PQ8NH95 151 aa7.93□□□□□ -1.14
ATG4B-208ENST00000419606 HINT1P49773 126 aaPredicted RBP7.92□□□□□ -1.14
ATG4B-208ENST00000419606 S100A7L2Q5SY68 101 aa7.92□□□□□ -1.14
ATG4B-208ENST00000419606 A6NDN8 102 aa7.91□□□□□ -1.14
ATG4B-208ENST00000419606 BVES-AS1Q5T3Y7 98 aa7.91□□□□□ -1.14
ATG4B-208ENST00000419606 KRTAP10-4P60372 401 aaPredicted RBP7.9□□□□□ -1.14
ATG4B-208ENST00000419606 RPL37AP61513 92 aaKnown RBP7.9□□□□□ -1.14
ATG4B-208ENST00000419606 FAT1Q14517 4588 aa7.9□□□□□ -1.15
ATG4B-208ENST00000419606 K7ERJ3 54 aa7.89□□□□□ -1.15
ATG4B-208ENST00000419606 C1orf137Q5JT78 98 aa7.89□□□□□ -1.15
ATG4B-208ENST00000419606 TMEM126AQ9H061 195 aa7.89□□□□□ -1.15
ATG4B-208ENST00000419606 NHP2Q9NX24 153 aaKnown RBP7.89□□□□□ -1.15
ATG4B-208ENST00000419606 TRAV13-2A0A0B4J235 113 aa7.88□□□□□ -1.15
ATG4B-208ENST00000419606 PCP4L1A6NKN8 68 aa7.88□□□□□ -1.15
ATG4B-208ENST00000419606 RPL13AP40429 203 aaKnown RBP7.88□□□□□ -1.15
ATG4B-208ENST00000419606 Q5VSD8 79 aa7.88□□□□□ -1.15
ATG4B-208ENST00000419606 REG3GQ6UW15 175 aa7.88□□□□□ -1.15
ATG4B-208ENST00000419606 Q8N1X5 172 aa7.88□□□□□ -1.15
ATG4B-208ENST00000419606 KCNQ1DNQ9H478 68 aa7.88□□□□□ -1.15
ATG4B-208ENST00000419606 TRAV23DV6A0A075B6W5 121 aa7.87□□□□□ -1.15
ATG4B-208ENST00000419606 A0A0B4J2C4 111 aa7.87□□□□□ -1.15
ATG4B-208ENST00000419606 TMEM238LA0A1B0GVL6 79 aa7.87□□□□□ -1.15
ATG4B-208ENST00000419606 A6NJY4 79 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms