RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 FABP4P15090 132 aa6.53□□□□□ -1.36
RFC1-203ENST00000418436 PRR3P79522 188 aaKnown RBP6.53□□□□□ -1.36
RFC1-203ENST00000418436 MYCBP2O75592 4640 aa6.53□□□□□ -1.36
RFC1-203ENST00000418436 FLG2Q5D862 2391 aaPredicted RBP6.52□□□□□ -1.37
RFC1-203ENST00000418436 PHF5AQ7RTV0 110 aaKnown RBP6.52□□□□□ -1.37
RFC1-203ENST00000418436 H0Y8G0 127 aa6.51□□□□□ -1.37
RFC1-203ENST00000418436 SFTA2Q6UW10 78 aa6.51□□□□□ -1.37
RFC1-203ENST00000418436 FAM19A5Q7Z5A7 132 aaPredicted RBP6.51□□□□□ -1.37
RFC1-203ENST00000418436 ZNF625Q96I27 306 aaPredicted RBP6.51□□□□□ -1.37
RFC1-203ENST00000418436 MAP1LC3CQ9BXW4 147 aa6.51□□□□□ -1.37
RFC1-203ENST00000418436 XAGE1AQ9HD64 81 aa6.51□□□□□ -1.37
RFC1-203ENST00000418436 PLNP26678 52 aa6.5□□□□□ -1.37
RFC1-203ENST00000418436 KRTAP29-1A8MX34 341 aaPredicted RBP6.49□□□□□ -1.37
RFC1-203ENST00000418436 DPM2O94777 84 aa6.49□□□□□ -1.37
RFC1-203ENST00000418436 COX17Q14061 63 aa6.49□□□□□ -1.37
RFC1-203ENST00000418436 SERTAD4-AS1Q5TG53 156 aa6.49□□□□□ -1.37
RFC1-203ENST00000418436 KRTAP11-1Q8IUC1 163 aa6.49□□□□□ -1.37
RFC1-203ENST00000418436 PSORS1C2Q9UIG4 136 aa6.49□□□□□ -1.37
RFC1-203ENST00000418436 ERG28Q9UKR5 140 aa6.49□□□□□ -1.37
RFC1-203ENST00000418436 FAT3Q8TDW7 4589 aa6.48□□□□□ -1.37
RFC1-203ENST00000418436 SYS1-DBNDD2H3BUS1 97 aa6.48□□□□□ -1.37
RFC1-203ENST00000418436 M0QXV9 152 aa6.48□□□□□ -1.37
RFC1-203ENST00000418436 IGKCP01834 107 aa6.48□□□□□ -1.37
RFC1-203ENST00000418436 PFN2P35080 140 aa6.48□□□□□ -1.37
RFC1-203ENST00000418436 SRSF9Q13242 221 aaKnown RBP eCLIP6.48□□□□□ -1.37
RFC1-203ENST00000418436 PMCHL2Q9BQD1 86 aa6.48□□□□□ -1.37
RFC1-203ENST00000418436 LRP1Q07954 4544 aaKnown RBP6.48□□□□□ -1.37
RFC1-203ENST00000418436 TP73-AS1Q9UF72 201 aa6.47□□□□□ -1.37
RFC1-203ENST00000418436 C22orf24Q9Y442 160 aa6.47□□□□□ -1.37
RFC1-203ENST00000418436 IGLV5-37A0A075B6J1 123 aa6.46□□□□□ -1.38
RFC1-203ENST00000418436 LEPROTO15243 131 aa6.46□□□□□ -1.38
RFC1-203ENST00000418436 OXTP01178 125 aa6.46□□□□□ -1.38
RFC1-203ENST00000418436 LINC01545Q5VT33 79 aa6.46□□□□□ -1.38
RFC1-203ENST00000418436 PET117Q6UWS5 81 aa6.46□□□□□ -1.38
RFC1-203ENST00000418436 SND1-IT1Q9HBX3 110 aa6.46□□□□□ -1.38
RFC1-203ENST00000418436 C3orf79P0CE67 100 aa6.45□□□□□ -1.38
RFC1-203ENST00000418436 TSPEAR-AS2P59090 65 aa6.45□□□□□ -1.38
RFC1-203ENST00000418436 HERV-K104P63124 156 aa6.45□□□□□ -1.38
RFC1-203ENST00000418436 LBHQ53QV2 105 aaPredicted RBP6.45□□□□□ -1.38
RFC1-203ENST00000418436 C1orf137Q5JT78 98 aa6.45□□□□□ -1.38
RFC1-203ENST00000418436 SPINK6Q6UWN8 80 aa6.45□□□□□ -1.38
RFC1-203ENST00000418436 PLEKHB2Q96CS7 222 aa6.45□□□□□ -1.38
RFC1-203ENST00000418436 NDUFA12Q9UI09 145 aa6.45□□□□□ -1.38
RFC1-203ENST00000418436 MYMXA0A1B0GTQ4 84 aa6.44□□□□□ -1.38
RFC1-203ENST00000418436 HERVK_113P61574 105 aa6.44□□□□□ -1.38
RFC1-203ENST00000418436 UBE2BP63146 152 aa6.44□□□□□ -1.38
RFC1-203ENST00000418436 MRPL55Q7Z7F7 128 aaKnown RBP6.44□□□□□ -1.38
RFC1-203ENST00000418436 E9PLD3 99 aa6.43□□□□□ -1.38
RFC1-203ENST00000418436 J3QQQ9 107 aa6.43□□□□□ -1.38
RFC1-203ENST00000418436 IGLV7-43P04211 117 aa6.43□□□□□ -1.38
RFC1-203ENST00000418436 LINC00158P58513 81 aa6.43□□□□□ -1.38
RFC1-203ENST00000418436 KRTAP23-1A1A580 65 aa6.42□□□□□ -1.38
RFC1-203ENST00000418436 LINC00587B1AMM8 73 aa6.42□□□□□ -1.38
RFC1-203ENST00000418436 SMIM13P0DJ93 91 aa6.42□□□□□ -1.38
RFC1-203ENST00000418436 VPREB1P12018 145 aa6.42□□□□□ -1.38
RFC1-203ENST00000418436 NMUP48645 174 aa6.42□□□□□ -1.38
RFC1-203ENST00000418436 LINC00167Q96N53 147 aa6.42□□□□□ -1.38
RFC1-203ENST00000418436 DMBT1Q9UGM3 2413 aaPredicted RBP6.41□□□□□ -1.38
RFC1-203ENST00000418436 A0A0U1RRA0 63 aa6.41□□□□□ -1.38
RFC1-203ENST00000418436 KRTDAPP60985 99 aa6.41□□□□□ -1.38
RFC1-203ENST00000418436 MEIG1Q5JSS6 88 aa6.41□□□□□ -1.38
RFC1-203ENST00000418436 Q8NDZ9 215 aa6.41□□□□□ -1.38
RFC1-203ENST00000418436 LGALS3P17931 250 aaKnown RBP6.4□□□□□ -1.38
RFC1-203ENST00000418436 RPL24P83731 157 aaKnown RBP6.4□□□□□ -1.38
RFC1-203ENST00000418436 HIST3H2BBQ8N257 126 aa6.4□□□□□ -1.38
RFC1-203ENST00000418436 MIR7-3HGQ8N6C7 128 aa6.4□□□□□ -1.38
RFC1-203ENST00000418436 NKAPP1Q8N9T2 125 aa6.4□□□□□ -1.38
RFC1-203ENST00000418436 HERC1Q15751 4861 aa6.39□□□□□ -1.39
RFC1-203ENST00000418436 LOC107984156A0A0G2JMH3 177 aa6.39□□□□□ -1.39
RFC1-203ENST00000418436 RPL37AP8A6NKH3 93 aa6.39□□□□□ -1.39
RFC1-203ENST00000418436 MT1HL1P0DM35 61 aa6.39□□□□□ -1.39
RFC1-203ENST00000418436 ARL17AQ8IVW1 177 aa6.39□□□□□ -1.39
RFC1-203ENST00000418436 LINC01600Q96MT4 127 aa6.39□□□□□ -1.39
RFC1-203ENST00000418436 GAGE10A6NGK3 116 aa6.38□□□□□ -1.39
RFC1-203ENST00000418436 REG3GQ6UW15 175 aa6.38□□□□□ -1.39
RFC1-203ENST00000418436 HIST1H2BLQ99880 126 aa6.38□□□□□ -1.39
RFC1-203ENST00000418436 IGLV1-50A0A075B6I6 118 aa6.37□□□□□ -1.39
RFC1-203ENST00000418436 IGKV2D-26A0A0A0MRZ7 120 aa6.37□□□□□ -1.39
RFC1-203ENST00000418436 A0A0J9YXY3 114 aa6.37□□□□□ -1.39
RFC1-203ENST00000418436 C20orf202A1L168 122 aa6.37□□□□□ -1.39
RFC1-203ENST00000418436 BCE1O60756 84 aa6.37□□□□□ -1.39
RFC1-203ENST00000418436 DIRC1Q969H9 104 aa6.37□□□□□ -1.39
RFC1-203ENST00000418436 H0Y9J4 135 aa6.36□□□□□ -1.39
RFC1-203ENST00000418436 ZNF861PO60384 105 aa6.36□□□□□ -1.39
RFC1-203ENST00000418436 S100A6P06703 90 aa6.36□□□□□ -1.39
RFC1-203ENST00000418436 S100A2P29034 98 aa6.36□□□□□ -1.39
RFC1-203ENST00000418436 AKR1D1P51857 326 aa6.36□□□□□ -1.39
RFC1-203ENST00000418436 BOD1L2Q8IYS8 172 aa6.36□□□□□ -1.39
RFC1-203ENST00000418436 TNXBP22105 4242 aa6.36□□□□□ -1.39
RFC1-203ENST00000418436 IGKV2-28A0A075B6P5 120 aa6.35□□□□□ -1.39
RFC1-203ENST00000418436 M0R378 163 aa6.35□□□□□ -1.39
RFC1-203ENST00000418436 IGKV2D-28P01615 120 aa6.35□□□□□ -1.39
RFC1-203ENST00000418436 DAND5Q8N907 189 aa6.35□□□□□ -1.39
RFC1-203ENST00000418436 C5orf52A6NGY3 159 aa6.34□□□□□ -1.39
RFC1-203ENST00000418436 KRTAP10-8P60410 259 aa6.34□□□□□ -1.39
RFC1-203ENST00000418436 SNRPEP62304 92 aaKnown RBP6.34□□□□□ -1.39
RFC1-203ENST00000418436 ADAMTSL4-AS1Q5T5F5 129 aa6.34□□□□□ -1.39
RFC1-203ENST00000418436 KRTAP13-1Q8IUC0 172 aa6.34□□□□□ -1.39
RFC1-203ENST00000418436 LITAFQ99732 161 aa6.34□□□□□ -1.39
RFC1-203ENST00000418436 TIMM17BO60830 172 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms