RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 PTTG1IPP53801 180 aa5.13□□□□□ -1.59
MDC1-203ENST00000417033 LINC00158P58513 81 aa5.13□□□□□ -1.59
MDC1-203ENST00000417033 HERV-K104P63124 156 aa5.13□□□□□ -1.59
MDC1-203ENST00000417033 C9orf129Q5T035 196 aaKnown RBP5.13□□□□□ -1.59
MDC1-203ENST00000417033 BOD1L2Q8IYS8 172 aa5.13□□□□□ -1.59
MDC1-203ENST00000417033 MIR7-3HGQ8N6C7 128 aa5.13□□□□□ -1.59
MDC1-203ENST00000417033 Q8NDZ9 215 aa5.13□□□□□ -1.59
MDC1-203ENST00000417033 PRO1933Q9H354 126 aa5.13□□□□□ -1.59
MDC1-203ENST00000417033 NPC2P61916 151 aa5.12□□□□□ -1.59
MDC1-203ENST00000417033 SOSTDC1Q6X4U4 206 aa5.12□□□□□ -1.59
MDC1-203ENST00000417033 C2orf91Q6ZV80 131 aa5.12□□□□□ -1.59
MDC1-203ENST00000417033 KRTAP7-1Q8IUC3 87 aa5.12□□□□□ -1.59
MDC1-203ENST00000417033 SPACA4Q8TDM5 124 aa5.12□□□□□ -1.59
MDC1-203ENST00000417033 KRTAP9-2Q9BYQ4 174 aa5.12□□□□□ -1.59
MDC1-203ENST00000417033 SND1-IT1Q9HBX3 110 aa5.12□□□□□ -1.59
MDC1-203ENST00000417033 A0A1W2PNN7 141 aa5.11□□□□□ -1.59
MDC1-203ENST00000417033 SERTAD4-AS1Q5TG53 156 aa5.11□□□□□ -1.59
MDC1-203ENST00000417033 SFTA2Q6UW10 78 aa5.11□□□□□ -1.59
MDC1-203ENST00000417033 SCGB1D4Q6XE38 83 aa5.11□□□□□ -1.59
MDC1-203ENST00000417033 Q6ZSA8 131 aa5.11□□□□□ -1.59
MDC1-203ENST00000417033 C12orf57Q99622 126 aa5.11□□□□□ -1.59
MDC1-203ENST00000417033 S100A12P80511 92 aa5.1□□□□□ -1.59
MDC1-203ENST00000417033 CIRBPQ14011 172 aaKnown RBP5.1□□□□□ -1.59
MDC1-203ENST00000417033 SLC25A34Q6PIV7 304 aa5.1□□□□□ -1.59
MDC1-203ENST00000417033 SCXQ7RTU7 201 aa5.1□□□□□ -1.59
MDC1-203ENST00000417033 FAM19A5Q7Z5A7 132 aaPredicted RBP5.1□□□□□ -1.59
MDC1-203ENST00000417033 LINC00518Q8N0U6 118 aa5.1□□□□□ -1.59
MDC1-203ENST00000417033 A0A087WYN8 130 aa5.09□□□□□ -1.59
MDC1-203ENST00000417033 DLEU1O43261 78 aa5.09□□□□□ -1.59
MDC1-203ENST00000417033 TIMM17BO60830 172 aa5.09□□□□□ -1.59
MDC1-203ENST00000417033 XGP55808 180 aa5.09□□□□□ -1.59
MDC1-203ENST00000417033 COX17Q14061 63 aa5.09□□□□□ -1.59
MDC1-203ENST00000417033 DNAH5Q8TE73 4624 aa5.09□□□□□ -1.6
MDC1-203ENST00000417033 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.08□□□□□ -1.6
MDC1-203ENST00000417033 PRR3P79522 188 aaKnown RBP5.08□□□□□ -1.6
MDC1-203ENST00000417033 CIRBP-AS1Q8TBR5 109 aa5.08□□□□□ -1.6
MDC1-203ENST00000417033 LINC00308Q8TCZ7 52 aa5.08□□□□□ -1.6
MDC1-203ENST00000417033 PKD1P98161 4303 aa5.08□□□□□ -1.6
MDC1-203ENST00000417033 KRTAP9-6A0A140TA67 174 aa5.07□□□□□ -1.6
MDC1-203ENST00000417033 TMEM238C9JI98 176 aa5.07□□□□□ -1.6
MDC1-203ENST00000417033 VPREB1P12018 145 aa5.07□□□□□ -1.6
MDC1-203ENST00000417033 PHF5AQ7RTV0 110 aaKnown RBP5.07□□□□□ -1.6
MDC1-203ENST00000417033 KRTAP11-1Q8IUC1 163 aa5.07□□□□□ -1.6
MDC1-203ENST00000417033 SPANXDQ9BXN6 97 aa5.07□□□□□ -1.6
MDC1-203ENST00000417033 SPANXCQ9NY87 97 aa5.07□□□□□ -1.6
MDC1-203ENST00000417033 UQCR10Q9UDW1 63 aa5.07□□□□□ -1.6
MDC1-203ENST00000417033 DYNC1H1Q14204 4646 aaKnown RBP5.07□□□□□ -1.6
MDC1-203ENST00000417033 GAGE10A6NGK3 116 aa5.06□□□□□ -1.6
MDC1-203ENST00000417033 LINC00587B1AMM8 73 aa5.06□□□□□ -1.6
MDC1-203ENST00000417033 NCR3O14931 201 aa5.06□□□□□ -1.6
MDC1-203ENST00000417033 MUSTN1Q8IVN3 82 aa5.06□□□□□ -1.6
MDC1-203ENST00000417033 DPH3Q96FX2 82 aa5.06□□□□□ -1.6
MDC1-203ENST00000417033 SPANXB1Q9NS25 103 aaPredicted RBP5.06□□□□□ -1.6
MDC1-203ENST00000417033 PLAC8Q9NZF1 115 aa5.06□□□□□ -1.6
MDC1-203ENST00000417033 PKIGQ9Y2B9 76 aa5.06□□□□□ -1.6
MDC1-203ENST00000417033 LRP1BQ9NZR2 4599 aa5.05□□□□□ -1.6
MDC1-203ENST00000417033 EPM2AB3EWF7 344 aa5.05□□□□□ -1.6
MDC1-203ENST00000417033 M0QXV9 152 aa5.05□□□□□ -1.6
MDC1-203ENST00000417033 MIEN1Q9BRT3 115 aa5.05□□□□□ -1.6
MDC1-203ENST00000417033 HIGD1BQ9P298 99 aa5.05□□□□□ -1.6
MDC1-203ENST00000417033 LINC00474Q9P2X8 69 aa5.05□□□□□ -1.6
MDC1-203ENST00000417033 C22orf24Q9Y442 160 aa5.05□□□□□ -1.6
MDC1-203ENST00000417033 HECTD4Q9Y4D8 3996 aa5.05□□□□□ -1.6
MDC1-203ENST00000417033 IGLV5-37A0A075B6J1 123 aa5.04□□□□□ -1.6
MDC1-203ENST00000417033 IGKV2-28A0A075B6P5 120 aa5.04□□□□□ -1.6
MDC1-203ENST00000417033 LOC107984156A0A0G2JMH3 177 aa5.04□□□□□ -1.6
MDC1-203ENST00000417033 IGKV2D-28P01615 120 aa5.04□□□□□ -1.6
MDC1-203ENST00000417033 SMR3BP02814 79 aaPredicted RBP5.04□□□□□ -1.6
MDC1-203ENST00000417033 HNRNPA3P51991 378 aaKnown RBP5.04□□□□□ -1.6
MDC1-203ENST00000417033 SRSF9Q13242 221 aaKnown RBP eCLIP5.04□□□□□ -1.6
MDC1-203ENST00000417033 ARL17AQ8IVW1 177 aa5.04□□□□□ -1.6
MDC1-203ENST00000417033 C7orf33Q8WU49 177 aa5.04□□□□□ -1.6
MDC1-203ENST00000417033 HIST1H4GQ99525 98 aa5.04□□□□□ -1.6
MDC1-203ENST00000417033 PKHD1P08F94 4074 aa5.03□□□□□ -1.6
MDC1-203ENST00000417033 A4D1N5 150 aa5.02□□□□□ -1.61
MDC1-203ENST00000417033 RPL37AP8A6NKH3 93 aa5.02□□□□□ -1.61
MDC1-203ENST00000417033 IFITM1P13164 125 aa5.02□□□□□ -1.61
MDC1-203ENST00000417033 FXYD2P54710 66 aa5.02□□□□□ -1.61
MDC1-203ENST00000417033 MRPL55Q7Z7F7 128 aaKnown RBP5.02□□□□□ -1.61
MDC1-203ENST00000417033 LINC00337Q8N6G1 96 aa5.02□□□□□ -1.61
MDC1-203ENST00000417033 NKAPP1Q8N9T2 125 aa5.02□□□□□ -1.61
MDC1-203ENST00000417033 LINC00167Q96N53 147 aa5.02□□□□□ -1.61
MDC1-203ENST00000417033 TRBV10-3A0A0K0K1G6 114 aa5.01□□□□□ -1.61
MDC1-203ENST00000417033 TSTD3H0UI37 97 aa5.01□□□□□ -1.61
MDC1-203ENST00000417033 CDK2AP2O75956 126 aa5.01□□□□□ -1.61
MDC1-203ENST00000417033 CTAG1AP78358 180 aa5.01□□□□□ -1.61
MDC1-203ENST00000417033 RPL24P83731 157 aaKnown RBP5.01□□□□□ -1.61
MDC1-203ENST00000417033 HSD52Q0P140 79 aa5.01□□□□□ -1.61
MDC1-203ENST00000417033 LCE3BQ5TA77 95 aa5.01□□□□□ -1.61
MDC1-203ENST00000417033 Q6ZVH6 145 aa5.01□□□□□ -1.61
MDC1-203ENST00000417033 CEND1Q8N111 149 aa5.01□□□□□ -1.61
MDC1-203ENST00000417033 DNAH8Q96JB1 4490 aa5.01□□□□□ -1.61
MDC1-203ENST00000417033 M0R378 163 aa5□□□□□ -1.61
MDC1-203ENST00000417033 NDUFC2O95298 119 aa5□□□□□ -1.61
MDC1-203ENST00000417033 UBE2BP63146 152 aa5□□□□□ -1.61
MDC1-203ENST00000417033 TAL2Q16559 108 aa5□□□□□ -1.61
MDC1-203ENST00000417033 B5MCH6 92 aa4.99□□□□□ -1.61
MDC1-203ENST00000417033 K7ERJ3 54 aa4.99□□□□□ -1.61
MDC1-203ENST00000417033 DDTP30046 118 aa4.99□□□□□ -1.61
MDC1-203ENST00000417033 HINT1P49773 126 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms