RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 C9orf153Q5TBE3 101 aa9.79□□□□□ -0.84
SGCE-202ENST00000415788 Q6ZR54 194 aa9.79□□□□□ -0.84
SGCE-202ENST00000415788 LINC00526Q96FQ7 95 aa9.79□□□□□ -0.84
SGCE-202ENST00000415788 RPL28P46779 137 aaKnown RBP9.78□□□□□ -0.84
SGCE-202ENST00000415788 ALMS1Q8TCU4 4167 aa9.78□□□□□ -0.84
SGCE-202ENST00000415788 IBA57-AS1B1ANH7 110 aa9.77□□□□□ -0.85
SGCE-202ENST00000415788 ANGP03950 147 aaKnown RBP9.77□□□□□ -0.85
SGCE-202ENST00000415788 Q8N3U1 123 aa9.77□□□□□ -0.85
SGCE-202ENST00000415788 KRTAP1-5Q9BYS1 174 aa9.76□□□□□ -0.85
SGCE-202ENST00000415788 M0R2N4 97 aa9.76□□□□□ -0.85
SGCE-202ENST00000415788 MALP21145 153 aa9.76□□□□□ -0.85
SGCE-202ENST00000415788 KLK12Q9UKR0 248 aa9.76□□□□□ -0.85
SGCE-202ENST00000415788 IGLV4-60A0A075B6I1 120 aa9.75□□□□□ -0.85
SGCE-202ENST00000415788 C22orf24Q9Y442 160 aa9.75□□□□□ -0.85
SGCE-202ENST00000415788 ATOX1O00244 68 aa9.74□□□□□ -0.85
SGCE-202ENST00000415788 CRPP02741 224 aa9.74□□□□□ -0.85
SGCE-202ENST00000415788 COX7CP15954 63 aa9.74□□□□□ -0.85
SGCE-202ENST00000415788 A0A0U1RRA0 63 aa9.74□□□□□ -0.85
SGCE-202ENST00000415788 HIST1H4AP62805 103 aaKnown RBP9.74□□□□□ -0.85
SGCE-202ENST00000415788 PRR34Q9NV39 138 aa9.74□□□□□ -0.85
SGCE-202ENST00000415788 FAM218AQ96MZ4 157 aa9.73□□□□□ -0.85
SGCE-202ENST00000415788 CDC42SE2Q9NRR3 84 aa9.73□□□□□ -0.85
SGCE-202ENST00000415788 VPS13DQ5THJ4 4388 aa9.73□□□□□ -0.85
SGCE-202ENST00000415788 H0YGX0 51 aa9.72□□□□□ -0.85
SGCE-202ENST00000415788 REG3AQ06141 175 aa9.72□□□□□ -0.85
SGCE-202ENST00000415788 GAGE2AQ6NT46 116 aa9.72□□□□□ -0.85
SGCE-202ENST00000415788 LINC00269Q8N2A0 174 aa9.72□□□□□ -0.85
SGCE-202ENST00000415788 TRAV13-1A0A0B4J241 112 aa9.72□□□□□ -0.85
SGCE-202ENST00000415788 A0A1B0GX51 115 aa9.72□□□□□ -0.85
SGCE-202ENST00000415788 C1orf134Q5TEV5 83 aa9.72□□□□□ -0.85
SGCE-202ENST00000415788 C6orf223Q8N319 242 aa9.72□□□□□ -0.85
SGCE-202ENST00000415788 RMI2Q96E14 147 aa9.72□□□□□ -0.85
SGCE-202ENST00000415788 DNAH1Q9P2D7 4330 aa9.72□□□□□ -0.85
SGCE-202ENST00000415788 LYSTQ99698 3801 aa9.71□□□□□ -0.85
SGCE-202ENST00000415788 DNAL4O96015 105 aa9.71□□□□□ -0.85
SGCE-202ENST00000415788 CRYGAP11844 174 aa9.71□□□□□ -0.85
SGCE-202ENST00000415788 ENHOQ6UWT2 76 aa9.7□□□□□ -0.86
SGCE-202ENST00000415788 Q9HAA7 133 aa9.7□□□□□ -0.86
SGCE-202ENST00000415788 Q6JHZ5 121 aa9.69□□□□□ -0.86
SGCE-202ENST00000415788 CLPSL2Q6UWE3 100 aa9.69□□□□□ -0.86
SGCE-202ENST00000415788 C2orf48Q96LS8 159 aa9.69□□□□□ -0.86
SGCE-202ENST00000415788 OBSCN-AS1Q96MR7 158 aa9.69□□□□□ -0.86
SGCE-202ENST00000415788 COX7B2Q8TF08 81 aa9.68□□□□□ -0.86
SGCE-202ENST00000415788 C1orf43Q9BWL3 253 aa9.68□□□□□ -0.86
SGCE-202ENST00000415788 SND1-IT1Q9HBX3 110 aa9.68□□□□□ -0.86
SGCE-202ENST00000415788 J3KT08 172 aa9.68□□□□□ -0.86
SGCE-202ENST00000415788 RPS28P62857 69 aaKnown RBP9.67□□□□□ -0.86
SGCE-202ENST00000415788 LINC00337Q8N6G1 96 aa9.67□□□□□ -0.86
SGCE-202ENST00000415788 IGKV3OR2-268A0A0C4DH90 116 aa9.66□□□□□ -0.86
SGCE-202ENST00000415788 RPL18AQ02543 176 aaKnown RBP9.66□□□□□ -0.86
SGCE-202ENST00000415788 MIR7-3HGQ8N6C7 128 aa9.66□□□□□ -0.86
SGCE-202ENST00000415788 IGKV2-28A0A075B6P5 120 aa9.66□□□□□ -0.86
SGCE-202ENST00000415788 IGKV2D-24A0A075B6R9 120 aa9.66□□□□□ -0.86
SGCE-202ENST00000415788 LINC00959A0A1B0GUT2 108 aa9.66□□□□□ -0.86
SGCE-202ENST00000415788 IGKV2D-28P01615 120 aa9.66□□□□□ -0.86
SGCE-202ENST00000415788 SS18Q15532 418 aa9.66□□□□□ -0.86
SGCE-202ENST00000415788 SACSQ9NZJ4 4579 aa9.65□□□□□ -0.86
SGCE-202ENST00000415788 Q6ZRN7 208 aaPredicted RBP9.65□□□□□ -0.86
SGCE-202ENST00000415788 SMIM11BQ8TCY0 68 aa9.65□□□□□ -0.86
SGCE-202ENST00000415788 PSCAO43653 123 aa9.64□□□□□ -0.87
SGCE-202ENST00000415788 KMT2AQ03164 3969 aa9.64□□□□□ -0.87
SGCE-202ENST00000415788 DNAH6Q9C0G6 4158 aa9.63□□□□□ -0.87
SGCE-202ENST00000415788 IGLV10-54A0A075B6I4 117 aa9.63□□□□□ -0.87
SGCE-202ENST00000415788 A0A087WYN8 130 aa9.63□□□□□ -0.87
SGCE-202ENST00000415788 RTL8CO15255 209 aa9.63□□□□□ -0.87
SGCE-202ENST00000415788 CHCHD10Q8WYQ3 142 aaPredicted RBP9.63□□□□□ -0.87
SGCE-202ENST00000415788 KMT2CQ8NEZ4 4911 aaKnown RBP9.63□□□□□ -0.87
SGCE-202ENST00000415788 LINC00158P58513 81 aa9.62□□□□□ -0.87
SGCE-202ENST00000415788 LINC00336Q6ZUF6 198 aa9.62□□□□□ -0.87
SGCE-202ENST00000415788 SERP2Q8N6R1 65 aa9.62□□□□□ -0.87
SGCE-202ENST00000415788 C14orf132Q9NPU4 83 aa9.62□□□□□ -0.87
SGCE-202ENST00000415788 TMEM258P61165 79 aa9.61□□□□□ -0.87
SGCE-202ENST00000415788 S100A7L2Q5SY68 101 aa9.61□□□□□ -0.87
SGCE-202ENST00000415788 KRTAP26-1Q6PEX3 210 aa9.61□□□□□ -0.87
SGCE-202ENST00000415788 CD164L2Q6UWJ8 174 aa9.61□□□□□ -0.87
SGCE-202ENST00000415788 XCL1P47992 114 aa9.6□□□□□ -0.87
SGCE-202ENST00000415788 HYDINQ4G0P3 5121 aa9.59□□□□□ -0.87
SGCE-202ENST00000415788 LINC00846Q9NV44 126 aa9.59□□□□□ -0.87
SGCE-202ENST00000415788 ORMDL1Q9P0S3 153 aa9.59□□□□□ -0.87
SGCE-202ENST00000415788 TOMM7Q9P0U1 55 aa9.59□□□□□ -0.87
SGCE-202ENST00000415788 A0A087WZ39 114 aa9.58□□□□□ -0.88
SGCE-202ENST00000415788 IGHV3OR16-9A0A0B4J2B5 98 aa9.58□□□□□ -0.88
SGCE-202ENST00000415788 LECT2O14960 151 aa9.58□□□□□ -0.88
SGCE-202ENST00000415788 ATP5EP2Q5VTU8 51 aa9.58□□□□□ -0.88
SGCE-202ENST00000415788 hADV29S1A0JD25 119 aa9.57□□□□□ -0.88
SGCE-202ENST00000415788 IGKV3D-7A0A0C4DH55 119 aa9.57□□□□□ -0.88
SGCE-202ENST00000415788 JMJD7-PLA2G4BH0Y9G9 81 aa9.57□□□□□ -0.88
SGCE-202ENST00000415788 CCKP06307 115 aa9.57□□□□□ -0.88
SGCE-202ENST00000415788 C5orf47Q569G3 176 aa9.57□□□□□ -0.88
SGCE-202ENST00000415788 OR13C6PQ8NH95 151 aa9.57□□□□□ -0.88
SGCE-202ENST00000415788 LINC00167Q96N53 147 aa9.57□□□□□ -0.88
SGCE-202ENST00000415788 LRCOL1A6NCL2 159 aa9.56□□□□□ -0.88
SGCE-202ENST00000415788 TNP2Q05952 138 aa9.56□□□□□ -0.88
SGCE-202ENST00000415788 C9orf129Q5T035 196 aaKnown RBP9.56□□□□□ -0.88
SGCE-202ENST00000415788 RYR2Q92736 4967 aa9.56□□□□□ -0.88
SGCE-202ENST00000415788 A0A087WTM6 91 aa9.55□□□□□ -0.88
SGCE-202ENST00000415788 LOC107984640A0A0U1RRK4 108 aa9.55□□□□□ -0.88
SGCE-202ENST00000415788 USP17L23D6RBM5 183 aa9.55□□□□□ -0.88
SGCE-202ENST00000415788 C14orf177Q52M58 125 aa9.55□□□□□ -0.88
SGCE-202ENST00000415788 FAM19A5Q7Z5A7 132 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms