RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 FAM19A1Q7Z5A9 133 aa12.17□□□□□ -0.46
SCARB1-203ENST00000415380 APOC4P55056 127 aa12.16□□□□□ -0.46
SCARB1-203ENST00000415380 UBL5Q9BZL1 73 aa12.16□□□□□ -0.46
SCARB1-203ENST00000415380 ZNF561-AS1K7EIQ3 104 aa12.16□□□□□ -0.46
SCARB1-203ENST00000415380 IGLV6-57P01721 117 aa12.16□□□□□ -0.46
SCARB1-203ENST00000415380 HTN3P15516 51 aa12.16□□□□□ -0.46
SCARB1-203ENST00000415380 LELP1Q5T871 98 aa12.16□□□□□ -0.46
SCARB1-203ENST00000415380 Q8NAQ8 132 aa12.16□□□□□ -0.46
SCARB1-203ENST00000415380 MUC7Q8TAX7 377 aa12.16□□□□□ -0.46
SCARB1-203ENST00000415380 ITPR2Q14571 2701 aa12.15□□□□□ -0.46
SCARB1-203ENST00000415380 RBM3P98179 157 aaKnown RBP12.15□□□□□ -0.46
SCARB1-203ENST00000415380 Q6ZQT0 140 aa12.15□□□□□ -0.46
SCARB1-203ENST00000415380 KLK12Q9UKR0 248 aa12.15□□□□□ -0.47
SCARB1-203ENST00000415380 TRAV23DV6A0A075B6W5 121 aa12.14□□□□□ -0.47
SCARB1-203ENST00000415380 J3KT08 172 aa12.14□□□□□ -0.47
SCARB1-203ENST00000415380 PRR34Q9NV39 138 aa12.13□□□□□ -0.47
SCARB1-203ENST00000415380 LAMTOR3Q9UHA4 124 aa12.13□□□□□ -0.47
SCARB1-203ENST00000415380 LOC110117498A0A087WWA1 95 aa12.12□□□□□ -0.47
SCARB1-203ENST00000415380 GHRHP01286 108 aa12.12□□□□□ -0.47
SCARB1-203ENST00000415380 TRBV10-3A0A0K0K1G6 114 aa12.11□□□□□ -0.47
SCARB1-203ENST00000415380 M0R2N4 97 aa12.11□□□□□ -0.47
SCARB1-203ENST00000415380 MIFP14174 115 aa12.11□□□□□ -0.47
SCARB1-203ENST00000415380 SPART-AS1P0CW21 52 aa12.1□□□□□ -0.47
SCARB1-203ENST00000415380 TMEM258P61165 79 aa12.1□□□□□ -0.47
SCARB1-203ENST00000415380 Q6ZQY7 126 aa12.1□□□□□ -0.47
SCARB1-203ENST00000415380 HIVEP2P31629 2446 aa12.1□□□□□ -0.47
SCARB1-203ENST00000415380 C6orf48Q9UBA6 75 aa12.1□□□□□ -0.47
SCARB1-203ENST00000415380 GVQW2A0A096LPI5 108 aaPredicted RBP12.09□□□□□ -0.47
SCARB1-203ENST00000415380 XAGE1AQ9HD64 81 aa12.09□□□□□ -0.47
SCARB1-203ENST00000415380 RPS28P62857 69 aaKnown RBP12.08□□□□□ -0.48
SCARB1-203ENST00000415380 DSCR8Q96T75 97 aa12.06□□□□□ -0.48
SCARB1-203ENST00000415380 DIRC1Q969H9 104 aa12.05□□□□□ -0.48
SCARB1-203ENST00000415380 DPH3Q96FX2 82 aa12.05□□□□□ -0.48
SCARB1-203ENST00000415380 FAM19A5Q7Z5A7 132 aaPredicted RBP12.04□□□□□ -0.48
SCARB1-203ENST00000415380 Q6ZVQ6 151 aa12.04□□□□□ -0.48
SCARB1-203ENST00000415380 KMT2BQ9UMN6 2715 aaPredicted RBP12.04□□□□□ -0.48
SCARB1-203ENST00000415380 UNC79Q9P2D8 2635 aa12.04□□□□□ -0.48
SCARB1-203ENST00000415380 LINC01547P58512 204 aaPredicted RBP12.03□□□□□ -0.48
SCARB1-203ENST00000415380 HELZ2Q9BYK8 2649 aaKnown RBP12.03□□□□□ -0.48
SCARB1-203ENST00000415380 ZNF73O43830 326 aaPredicted RBP12.02□□□□□ -0.48
SCARB1-203ENST00000415380 H3BQ85 93 aa12.02□□□□□ -0.49
SCARB1-203ENST00000415380 HAMPP81172 84 aa12.02□□□□□ -0.49
SCARB1-203ENST00000415380 PDE6GP18545 87 aa12.01□□□□□ -0.49
SCARB1-203ENST00000415380 COX7BP24311 80 aa12.01□□□□□ -0.49
SCARB1-203ENST00000415380 HIGD2BQ4VC39 106 aa12□□□□□ -0.49
SCARB1-203ENST00000415380 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12□□□□□ -0.49
SCARB1-203ENST00000415380 ELOF1P60002 83 aaKnown RBP11.99□□□□□ -0.49
SCARB1-203ENST00000415380 TENM1Q9UKZ4 2725 aa11.99□□□□□ -0.49
SCARB1-203ENST00000415380 FASNP49327 2511 aaKnown RBP11.98□□□□□ -0.49
SCARB1-203ENST00000415380 VPREB1P12018 145 aa11.98□□□□□ -0.49
SCARB1-203ENST00000415380 WFDC10BQ8IUB3 73 aa11.98□□□□□ -0.49
SCARB1-203ENST00000415380 C20orf197Q8N268 126 aa11.98□□□□□ -0.49
SCARB1-203ENST00000415380 CAMK2N2Q96S95 79 aa11.98□□□□□ -0.49
SCARB1-203ENST00000415380 TRBV7-4A0A0J9YYF1 115 aa11.97□□□□□ -0.49
SCARB1-203ENST00000415380 J3QKU1 62 aa11.97□□□□□ -0.49
SCARB1-203ENST00000415380 INAFM1C9JVW0 142 aa11.96□□□□□ -0.49
SCARB1-203ENST00000415380 OXTP01178 125 aa11.96□□□□□ -0.49
SCARB1-203ENST00000415380 CXCL6P80162 114 aa11.95□□□□□ -0.5
SCARB1-203ENST00000415380 KRTAP26-1Q6PEX3 210 aa11.95□□□□□ -0.5
SCARB1-203ENST00000415380 TRBV7-6A0A0J9YX20 115 aa11.95□□□□□ -0.5
SCARB1-203ENST00000415380 BCE1O60756 84 aa11.95□□□□□ -0.5
SCARB1-203ENST00000415380 HIVEP1P15822 2718 aa11.94□□□□□ -0.5
SCARB1-203ENST00000415380 TRAV7A0A075B6U4 112 aa11.94□□□□□ -0.5
SCARB1-203ENST00000415380 TRAV10A0A0B4J240 114 aa11.94□□□□□ -0.5
SCARB1-203ENST00000415380 NDUFC2-KCTD14E9PQ53 114 aa11.94□□□□□ -0.5
SCARB1-203ENST00000415380 Q6ZRU5 148 aa11.94□□□□□ -0.5
SCARB1-203ENST00000415380 EGFEM1PQ0D2K5 195 aa11.94□□□□□ -0.5
SCARB1-203ENST00000415380 M0R378 163 aa11.93□□□□□ -0.5
SCARB1-203ENST00000415380 KPRPQ5T749 579 aaPredicted RBP11.92□□□□□ -0.5
SCARB1-203ENST00000415380 C15orf56Q8N910 161 aa11.92□□□□□ -0.5
SCARB1-203ENST00000415380 SCXQ7RTU7 201 aa11.9□□□□□ -0.5
SCARB1-203ENST00000415380 NOTCH2Q04721 2471 aa11.9□□□□□ -0.5
SCARB1-203ENST00000415380 LINC00528Q8N1L1 170 aa11.9□□□□□ -0.5
SCARB1-203ENST00000415380 TRRAPQ9Y4A5 3859 aa11.89□□□□□ -0.51
SCARB1-203ENST00000415380 RETNQ9HD89 108 aa11.88□□□□□ -0.51
SCARB1-203ENST00000415380 H3BNG1 76 aa11.87□□□□□ -0.51
SCARB1-203ENST00000415380 WIPF1O43516 503 aa11.87□□□□□ -0.51
SCARB1-203ENST00000415380 H7BZZ5 65 aa11.86□□□□□ -0.51
SCARB1-203ENST00000415380 Q6ZRP5 223 aa11.86□□□□□ -0.51
SCARB1-203ENST00000415380 Q6ZTC4 211 aa11.86□□□□□ -0.51
SCARB1-203ENST00000415380 HECTD1Q9ULT8 2610 aa11.85□□□□□ -0.51
SCARB1-203ENST00000415380 FAM236DA0A1B0GTK5 79 aa11.85□□□□□ -0.51
SCARB1-203ENST00000415380 FAM236CP0DP71 79 aa11.85□□□□□ -0.51
SCARB1-203ENST00000415380 OTOGQ6ZRI0 2925 aa11.85□□□□□ -0.51
SCARB1-203ENST00000415380 NSD1Q96L73 2696 aaPredicted RBP11.84□□□□□ -0.51
SCARB1-203ENST00000415380 KLKP1Q107X0 134 aa11.84□□□□□ -0.51
SCARB1-203ENST00000415380 ESRGQ1W209 222 aa11.84□□□□□ -0.51
SCARB1-203ENST00000415380 ATRQ13535 2644 aa11.83□□□□□ -0.52
SCARB1-203ENST00000415380 C5orf47Q569G3 176 aa11.82□□□□□ -0.52
SCARB1-203ENST00000415380 C1orf43Q9BWL3 253 aa11.82□□□□□ -0.52
SCARB1-203ENST00000415380 SNURFQ9Y675 71 aa11.82□□□□□ -0.52
SCARB1-203ENST00000415380 TEP1Q99973 2627 aaKnown RBP11.82□□□□□ -0.52
SCARB1-203ENST00000415380 RMI2Q96E14 147 aa11.81□□□□□ -0.52
SCARB1-203ENST00000415380 TM2D3Q9BRN9 247 aa11.81□□□□□ -0.52
SCARB1-203ENST00000415380 IGKV2D-24A0A075B6R9 120 aa11.8□□□□□ -0.52
SCARB1-203ENST00000415380 Q5XG85 94 aa11.8□□□□□ -0.52
SCARB1-203ENST00000415380 SYCNQ0VAF6 134 aa11.78□□□□□ -0.52
SCARB1-203ENST00000415380 C4orf26Q17RF5 130 aa11.78□□□□□ -0.52
SCARB1-203ENST00000415380 OXLD1Q5BKU9 147 aa11.78□□□□□ -0.52
SCARB1-203ENST00000415380 SERTAD4-AS1Q5TG53 156 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms