RNA–Protein interactions for RNA: ENST00000413755.5

SNHG17-201, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-201ENST00000413755 MUC17Q685J3 4493 aa8.38□□□□□ -1.07
SNHG17-201ENST00000413755 FAT4Q6V0I7 4981 aa8.37□□□□□ -1.07
SNHG17-201ENST00000413755 TMEM223A0PJW6 202 aa8.37□□□□□ -1.07
SNHG17-201ENST00000413755 FABP4P15090 132 aa8.37□□□□□ -1.07
SNHG17-201ENST00000413755 LINC00310P59036 64 aa8.37□□□□□ -1.07
SNHG17-201ENST00000413755 KRTAP13-2Q52LG2 175 aa8.37□□□□□ -1.07
SNHG17-201ENST00000413755 RPL37AP8A6NKH3 93 aa8.36□□□□□ -1.07
SNHG17-201ENST00000413755 NKAPP1Q8N9T2 125 aa8.36□□□□□ -1.07
SNHG17-201ENST00000413755 COX17Q14061 63 aa8.35□□□□□ -1.07
SNHG17-201ENST00000413755 KRTAP13-1Q8IUC0 172 aa8.35□□□□□ -1.07
SNHG17-201ENST00000413755 GAGE10A6NGK3 116 aa8.34□□□□□ -1.07
SNHG17-201ENST00000413755 ATP6V1G1O75348 118 aa8.33□□□□□ -1.08
SNHG17-201ENST00000413755 PLNP26678 52 aa8.33□□□□□ -1.08
SNHG17-201ENST00000413755 LINC00158P58513 81 aa8.33□□□□□ -1.08
SNHG17-201ENST00000413755 RETNLBQ9BQ08 111 aa8.33□□□□□ -1.08
SNHG17-201ENST00000413755 MAP1LC3CQ9BXW4 147 aa8.33□□□□□ -1.08
SNHG17-201ENST00000413755 IGLV5-37A0A075B6J1 123 aa8.32□□□□□ -1.08
SNHG17-201ENST00000413755 DPM2O94777 84 aa8.32□□□□□ -1.08
SNHG17-201ENST00000413755 MEIG1Q5JSS6 88 aa8.32□□□□□ -1.08
SNHG17-201ENST00000413755 SND1-IT1Q9HBX3 110 aa8.32□□□□□ -1.08
SNHG17-201ENST00000413755 A0A0U1RRA0 63 aa8.31□□□□□ -1.08
SNHG17-201ENST00000413755 HIST1H2BKO60814 126 aa8.31□□□□□ -1.08
SNHG17-201ENST00000413755 HIST1H2BJP06899 126 aa8.31□□□□□ -1.08
SNHG17-201ENST00000413755 HIST1H2BOP23527 126 aa8.31□□□□□ -1.08
SNHG17-201ENST00000413755 HIST1H2BBP33778 126 aa8.31□□□□□ -1.08
SNHG17-201ENST00000413755 HIST1H2BDP58876 126 aa8.31□□□□□ -1.08
SNHG17-201ENST00000413755 HERVK_113P61574 105 aa8.31□□□□□ -1.08
SNHG17-201ENST00000413755 HIST1H2BCP62807 126 aa8.31□□□□□ -1.08
SNHG17-201ENST00000413755 RPL24P83731 157 aaKnown RBP8.31□□□□□ -1.08
SNHG17-201ENST00000413755 HIST2H2BEQ16778 126 aa8.31□□□□□ -1.08
SNHG17-201ENST00000413755 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.31□□□□□ -1.08
SNHG17-201ENST00000413755 HIST1H2BHQ93079 126 aa8.31□□□□□ -1.08
SNHG17-201ENST00000413755 HIST1H2BNQ99877 126 aa8.31□□□□□ -1.08
SNHG17-201ENST00000413755 HIST1H2BMQ99879 126 aa8.31□□□□□ -1.08
SNHG17-201ENST00000413755 HERV-K104P63124 156 aa8.3□□□□□ -1.08
SNHG17-201ENST00000413755 FAM229BQ4G0N7 80 aa8.3□□□□□ -1.08
SNHG17-201ENST00000413755 PMCHL2Q9BQD1 86 aa8.3□□□□□ -1.08
SNHG17-201ENST00000413755 MYMXA0A1B0GTQ4 84 aa8.29□□□□□ -1.08
SNHG17-201ENST00000413755 IGKCP01834 107 aa8.29□□□□□ -1.08
SNHG17-201ENST00000413755 UBE2AP49459 152 aa8.29□□□□□ -1.08
SNHG17-201ENST00000413755 LINC00304Q8N9R0 145 aa8.29□□□□□ -1.08
SNHG17-201ENST00000413755 PLEKHB2Q96CS7 222 aa8.29□□□□□ -1.08
SNHG17-201ENST00000413755 NDUFA12Q9UI09 145 aa8.29□□□□□ -1.08
SNHG17-201ENST00000413755 LINC00587B1AMM8 73 aa8.28□□□□□ -1.08
SNHG17-201ENST00000413755 SMIM13P0DJ93 91 aa8.28□□□□□ -1.08
SNHG17-201ENST00000413755 TPRXLQ17RH7 258 aa8.28□□□□□ -1.08
SNHG17-201ENST00000413755 IGKV2-28A0A075B6P5 120 aa8.27□□□□□ -1.09
SNHG17-201ENST00000413755 LEPROTO15243 131 aa8.27□□□□□ -1.09
SNHG17-201ENST00000413755 IGKV2D-28P01615 120 aa8.27□□□□□ -1.09
SNHG17-201ENST00000413755 VPREB1P12018 145 aa8.26□□□□□ -1.09
SNHG17-201ENST00000413755 LGALS3P17931 250 aaKnown RBP8.26□□□□□ -1.09
SNHG17-201ENST00000413755 CDIP1Q9H305 208 aa8.26□□□□□ -1.09
SNHG17-201ENST00000413755 IGLV7-46A0A075B6I9 117 aa8.25□□□□□ -1.09
SNHG17-201ENST00000413755 J3QQQ9 107 aa8.25□□□□□ -1.09
SNHG17-201ENST00000413755 PRLHP81277 87 aa8.25□□□□□ -1.09
SNHG17-201ENST00000413755 MIR7-3HGQ8N6C7 128 aa8.25□□□□□ -1.09
SNHG17-201ENST00000413755 IGKV2D-26A0A0A0MRZ7 120 aa8.24□□□□□ -1.09
SNHG17-201ENST00000413755 KRTAP9-6A0A140TA67 174 aa8.24□□□□□ -1.09
SNHG17-201ENST00000413755 SYS1-DBNDD2H3BUS1 97 aa8.24□□□□□ -1.09
SNHG17-201ENST00000413755 TSPEAR-AS2P59090 65 aa8.24□□□□□ -1.09
SNHG17-201ENST00000413755 NMUP48645 174 aa8.23□□□□□ -1.09
SNHG17-201ENST00000413755 CTAG1AP78358 180 aa8.23□□□□□ -1.09
SNHG17-201ENST00000413755 BOD1L2Q8IYS8 172 aa8.23□□□□□ -1.09
SNHG17-201ENST00000413755 TMEM238C9JI98 176 aa8.22□□□□□ -1.09
SNHG17-201ENST00000413755 FAM19A1Q7Z5A9 133 aa8.22□□□□□ -1.09
SNHG17-201ENST00000413755 C3orf22Q8N5N4 141 aa8.22□□□□□ -1.09
SNHG17-201ENST00000413755 TMEM126AQ9H061 195 aa8.22□□□□□ -1.09
SNHG17-201ENST00000413755 M0R378 163 aa8.21□□□□□ -1.1
SNHG17-201ENST00000413755 S100A1P23297 94 aa8.21□□□□□ -1.1
SNHG17-201ENST00000413755 PET117Q6UWS5 81 aa8.21□□□□□ -1.1
SNHG17-201ENST00000413755 Q8NDZ9 215 aa8.21□□□□□ -1.1
SNHG17-201ENST00000413755 KRTDAPP60985 99 aa8.2□□□□□ -1.1
SNHG17-201ENST00000413755 MIEN1Q9BRT3 115 aa8.2□□□□□ -1.1
SNHG17-201ENST00000413755 PPDPFQ9H3Y8 114 aa8.2□□□□□ -1.1
SNHG17-201ENST00000413755 E9PLD3 99 aa8.19□□□□□ -1.1
SNHG17-201ENST00000413755 NCR3O14931 201 aa8.19□□□□□ -1.1
SNHG17-201ENST00000413755 COA6Q5JTJ3 125 aaKnown RBP8.19□□□□□ -1.1
SNHG17-201ENST00000413755 LINC01545Q5VT33 79 aa8.19□□□□□ -1.1
SNHG17-201ENST00000413755 DAND5Q8N907 189 aa8.19□□□□□ -1.1
SNHG17-201ENST00000413755 C3orf79P0CE67 100 aa8.18□□□□□ -1.1
SNHG17-201ENST00000413755 C20orf202A1L168 122 aa8.17□□□□□ -1.1
SNHG17-201ENST00000413755 S100A12P80511 92 aa8.17□□□□□ -1.1
SNHG17-201ENST00000413755 PRYO14603 147 aa8.15□□□□□ -1.1
SNHG17-201ENST00000413755 A0A0J9YXY3 114 aa8.14□□□□□ -1.11
SNHG17-201ENST00000413755 NPC2P61916 151 aa8.14□□□□□ -1.11
SNHG17-201ENST00000413755 SPAG11AQ6PDA7 123 aa8.14□□□□□ -1.11
SNHG17-201ENST00000413755 SPRR4Q96PI1 79 aa8.14□□□□□ -1.11
SNHG17-201ENST00000413755 HIGD2AQ9BW72 106 aa8.14□□□□□ -1.11
SNHG17-201ENST00000413755 TRBV10-3A0A0K0K1G6 114 aa8.12□□□□□ -1.11
SNHG17-201ENST00000413755 ZNF815PA8K554 130 aa8.12□□□□□ -1.11
SNHG17-201ENST00000413755 S100A2P29034 98 aa8.12□□□□□ -1.11
SNHG17-201ENST00000413755 FP248Q71RG6 208 aaPredicted RBP8.12□□□□□ -1.11
SNHG17-201ENST00000413755 SPANXB1Q9NS25 103 aaPredicted RBP8.12□□□□□ -1.11
SNHG17-201ENST00000413755 LOC107984156A0A0G2JMH3 177 aa8.11□□□□□ -1.11
SNHG17-201ENST00000413755 ETDCA0A1B0GVM5 59 aa8.11□□□□□ -1.11
SNHG17-201ENST00000413755 AKR1D1P51857 326 aa8.11□□□□□ -1.11
SNHG17-201ENST00000413755 KRTAP13-3Q3SY46 172 aa8.11□□□□□ -1.11
SNHG17-201ENST00000413755 S100A7L2Q5SY68 101 aa8.11□□□□□ -1.11
SNHG17-201ENST00000413755 ARL17AQ8IVW1 177 aa8.11□□□□□ -1.11
SNHG17-201ENST00000413755 TRBV10-2A0A0K0K1G8 114 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms