RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 Q6ZRX8 168 aa8.93□□□□□ -0.98
RNF43-201ENST00000407977 C8orf87E5RJ46 101 aa8.93□□□□□ -0.98
RNF43-201ENST00000407977 C7orf65Q6ZTY9 151 aa8.92□□□□□ -0.98
RNF43-201ENST00000407977 CYP4F30PQ9H0H9 118 aa8.92□□□□□ -0.98
RNF43-201ENST00000407977 IGKV2D-30A0A075B6S6 120 aa8.92□□□□□ -0.98
RNF43-201ENST00000407977 IGKV2-30P06310 120 aa8.92□□□□□ -0.98
RNF43-201ENST00000407977 PLA2G2AP14555 144 aa8.91□□□□□ -0.98
RNF43-201ENST00000407977 EXPH5Q8NEV8 1989 aa8.9□□□□□ -0.98
RNF43-201ENST00000407977 PIEZO1Q92508 2521 aa8.9□□□□□ -0.98
RNF43-201ENST00000407977 IGF2RP11717 2491 aa8.9□□□□□ -0.98
RNF43-201ENST00000407977 GVQW2A0A096LPI5 108 aaPredicted RBP8.9□□□□□ -0.98
RNF43-201ENST00000407977 KRTAP10-9P60411 292 aa8.9□□□□□ -0.98
RNF43-201ENST00000407977 KLK9Q2XQG4 91 aa8.9□□□□□ -0.98
RNF43-201ENST00000407977 LINC00476Q8WZB0 136 aa8.9□□□□□ -0.98
RNF43-201ENST00000407977 TRBV7-4A0A0J9YYF1 115 aa8.89□□□□□ -0.99
RNF43-201ENST00000407977 C1orf134Q5TEV5 83 aa8.89□□□□□ -0.99
RNF43-201ENST00000407977 NCOR2Q9Y618 2525 aa8.89□□□□□ -0.99
RNF43-201ENST00000407977 ATP11AUNQ6ZP68 121 aa8.88□□□□□ -0.99
RNF43-201ENST00000407977 TET2Q6N021 2002 aaPredicted RBP8.88□□□□□ -0.99
RNF43-201ENST00000407977 VPREB1P12018 145 aa8.88□□□□□ -0.99
RNF43-201ENST00000407977 MOBPQ13875 183 aa8.87□□□□□ -0.99
RNF43-201ENST00000407977 KLKP1Q107X0 134 aa8.86□□□□□ -0.99
RNF43-201ENST00000407977 FHL3Q13643 280 aa8.86□□□□□ -0.99
RNF43-201ENST00000407977 LOC101927531A0A1B0GV80 90 aa8.86□□□□□ -0.99
RNF43-201ENST00000407977 IGLV6-57P01721 117 aa8.85□□□□□ -0.99
RNF43-201ENST00000407977 USP9XQ93008 2570 aaPredicted RBP8.85□□□□□ -0.99
RNF43-201ENST00000407977 SMR3AQ99954 134 aa8.84□□□□□ -0.99
RNF43-201ENST00000407977 ABCA12Q86UK0 2595 aa8.83□□□□□ -1
RNF43-201ENST00000407977 FN1P02751 2386 aaKnown RBP8.83□□□□□ -1
RNF43-201ENST00000407977 NHLRC4P0CG21 123 aaPredicted RBP8.82□□□□□ -1
RNF43-201ENST00000407977 FSHBP01225 129 aa8.81□□□□□ -1
RNF43-201ENST00000407977 A8MWP4 228 aa8.81□□□□□ -1
RNF43-201ENST00000407977 MUC4Q99102 2169 aa8.8□□□□□ -1
RNF43-201ENST00000407977 ZNF462Q96JM2 2506 aa8.79□□□□□ -1
RNF43-201ENST00000407977 C16orf90A8MZG2 172 aa8.79□□□□□ -1
RNF43-201ENST00000407977 LINC00313P59037 77 aa8.79□□□□□ -1
RNF43-201ENST00000407977 A8MUN3 132 aa8.79□□□□□ -1
RNF43-201ENST00000407977 JMJD1CQ15652 2540 aa8.78□□□□□ -1
RNF43-201ENST00000407977 EPM2AB3EWF7 344 aa8.78□□□□□ -1
RNF43-201ENST00000407977 FAM229AH3BQW9 127 aa8.78□□□□□ -1
RNF43-201ENST00000407977 COA5Q86WW8 74 aa8.78□□□□□ -1
RNF43-201ENST00000407977 ST20-AS1Q8NBB2 130 aa8.77□□□□□ -1.01
RNF43-201ENST00000407977 TLN2Q9Y4G6 2542 aa8.76□□□□□ -1.01
RNF43-201ENST00000407977 SPACA4Q8TDM5 124 aa8.76□□□□□ -1.01
RNF43-201ENST00000407977 UQCR11O14957 56 aa8.76□□□□□ -1.01
RNF43-201ENST00000407977 PKD1L2Q7Z442 2459 aa8.75□□□□□ -1.01
RNF43-201ENST00000407977 CD164Q04900 197 aa8.75□□□□□ -1.01
RNF43-201ENST00000407977 K7EQZ3 153 aa8.75□□□□□ -1.01
RNF43-201ENST00000407977 KCNQ1DNQ9H478 68 aa8.74□□□□□ -1.01
RNF43-201ENST00000407977 Q6ZRP5 223 aa8.74□□□□□ -1.01
RNF43-201ENST00000407977 MRPL34Q9BQ48 92 aaKnown RBP8.74□□□□□ -1.01
RNF43-201ENST00000407977 LINC00528Q8N1L1 170 aa8.74□□□□□ -1.01
RNF43-201ENST00000407977 RPL37AP61513 92 aaKnown RBP8.73□□□□□ -1.01
RNF43-201ENST00000407977 H7BZZ5 65 aa8.73□□□□□ -1.01
RNF43-201ENST00000407977 PHF5AQ7RTV0 110 aaKnown RBP8.73□□□□□ -1.01
RNF43-201ENST00000407977 USP9YO00507 2555 aaPredicted RBP8.72□□□□□ -1.01
RNF43-201ENST00000407977 ZFYVE26Q68DK2 2539 aa8.71□□□□□ -1.01
RNF43-201ENST00000407977 LINC01600Q96MT4 127 aa8.71□□□□□ -1.01
RNF43-201ENST00000407977 LINC00336Q6ZUF6 198 aa8.71□□□□□ -1.02
RNF43-201ENST00000407977 MDFIQ99750 246 aa8.71□□□□□ -1.02
RNF43-201ENST00000407977 PTPRBP23467 1997 aa8.71□□□□□ -1.02
RNF43-201ENST00000407977 Q8NAQ8 132 aa8.71□□□□□ -1.02
RNF43-201ENST00000407977 SETD2Q9BYW2 2564 aaPredicted RBP8.7□□□□□ -1.02
RNF43-201ENST00000407977 LRRK2Q5S007 2527 aa8.69□□□□□ -1.02
RNF43-201ENST00000407977 IGLV1-50A0A075B6I6 118 aa8.69□□□□□ -1.02
RNF43-201ENST00000407977 SPINT4Q6UDR6 99 aa8.69□□□□□ -1.02
RNF43-201ENST00000407977 PRR15Q8IV56 129 aa8.69□□□□□ -1.02
RNF43-201ENST00000407977 DNAH10OSP0CZ25 163 aa8.68□□□□□ -1.02
RNF43-201ENST00000407977 EIF4EBP3O60516 100 aaPredicted RBP8.66□□□□□ -1.02
RNF43-201ENST00000407977 KTN1-AS1Q86SY8 53 aa8.66□□□□□ -1.02
RNF43-201ENST00000407977 IGLV8-61A0A075B6I0 122 aa8.65□□□□□ -1.02
RNF43-201ENST00000407977 LINC00588Q9Y4M8 146 aa8.64□□□□□ -1.03
RNF43-201ENST00000407977 NBDYA0A0U1RRE5 68 aa8.64□□□□□ -1.03
RNF43-201ENST00000407977 MIR22HGQ0VDD5 57 aa8.64□□□□□ -1.03
RNF43-201ENST00000407977 IGFL1Q6UW32 110 aa8.64□□□□□ -1.03
RNF43-201ENST00000407977 C8orf17Q9NRJ1 99 aa8.63□□□□□ -1.03
RNF43-201ENST00000407977 PRR34Q9NV39 138 aa8.63□□□□□ -1.03
RNF43-201ENST00000407977 SPANXA2-OT1Q8N9U9 137 aa8.63□□□□□ -1.03
RNF43-201ENST00000407977 RTL8CO15255 209 aa8.63□□□□□ -1.03
RNF43-201ENST00000407977 LCA10Q71F78 164 aa8.63□□□□□ -1.03
RNF43-201ENST00000407977 TYMSOSQ8TAI1 123 aa8.63□□□□□ -1.03
RNF43-201ENST00000407977 Q8N377 158 aa8.61□□□□□ -1.03
RNF43-201ENST00000407977 SSBP3-AS1Q7Z2R9 100 aa8.6□□□□□ -1.03
RNF43-201ENST00000407977 PLA2G2DQ9UNK4 145 aa8.6□□□□□ -1.03
RNF43-201ENST00000407977 Q96NJ1 140 aa8.6□□□□□ -1.03
RNF43-201ENST00000407977 COL27A1Q8IZC6 1860 aaPredicted RBP8.6□□□□□ -1.03
RNF43-201ENST00000407977 CSNK1G2-AS1Q8NCQ2 148 aa8.6□□□□□ -1.03
RNF43-201ENST00000407977 WDR87Q6ZQQ6 2873 aa8.59□□□□□ -1.03
RNF43-201ENST00000407977 A0A1B0GVX0 72 aa8.59□□□□□ -1.03
RNF43-201ENST00000407977 FAM168BA1KXE4 195 aa8.57□□□□□ -1.04
RNF43-201ENST00000407977 WIPF1O43516 503 aa8.57□□□□□ -1.04
RNF43-201ENST00000407977 TLX1NBP0CAT3 122 aa8.57□□□□□ -1.04
RNF43-201ENST00000407977 CHTF8P0CG12 524 aa8.57□□□□□ -1.04
RNF43-201ENST00000407977 CRIPTQ9P021 101 aa8.56□□□□□ -1.04
RNF43-201ENST00000407977 ANKRD11Q6UB99 2663 aaPredicted RBP8.56□□□□□ -1.04
RNF43-201ENST00000407977 OBSCN-AS1Q96MR7 158 aa8.55□□□□□ -1.04
RNF43-201ENST00000407977 CEP295Q9C0D2 2601 aa8.54□□□□□ -1.04
RNF43-201ENST00000407977 COL4A2P08572 1712 aa8.54□□□□□ -1.04
RNF43-201ENST00000407977 LINC00612Q8N6U2 182 aa8.54□□□□□ -1.04
RNF43-201ENST00000407977 CDC42SE1Q9NRR8 79 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 206.1 ms