RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 CASC10Q5T4H9 136 aa5.37□□□□□ -1.55
USP47-203ENST00000399455 EP400Q96L91 3159 aa5.37□□□□□ -1.55
USP47-203ENST00000399455 LINC00476Q8WZB0 136 aa5.36□□□□□ -1.55
USP47-203ENST00000399455 DEFB116Q30KQ4 102 aa5.36□□□□□ -1.55
USP47-203ENST00000399455 LINC00528Q8N1L1 170 aa5.36□□□□□ -1.55
USP47-203ENST00000399455 MPLKIPQ8TAP9 179 aa5.36□□□□□ -1.55
USP47-203ENST00000399455 YPEL4Q96NS1 127 aa5.36□□□□□ -1.55
USP47-203ENST00000399455 C2orf91Q6ZV80 131 aa5.36□□□□□ -1.55
USP47-203ENST00000399455 SNURFQ9Y675 71 aa5.36□□□□□ -1.55
USP47-203ENST00000399455 KRTAP1-1Q07627 177 aa5.35□□□□□ -1.55
USP47-203ENST00000399455 LRRK2Q5S007 2527 aa5.35□□□□□ -1.55
USP47-203ENST00000399455 SVIPQ8NHG7 77 aa5.35□□□□□ -1.55
USP47-203ENST00000399455 TRAV7A0A075B6U4 112 aa5.35□□□□□ -1.55
USP47-203ENST00000399455 SMR3BP02814 79 aaPredicted RBP5.35□□□□□ -1.55
USP47-203ENST00000399455 IGLV5-45A0A087WSX0 123 aa5.34□□□□□ -1.55
USP47-203ENST00000399455 A6NED7 52 aa5.34□□□□□ -1.55
USP47-203ENST00000399455 PCOTHQ58A44 107 aa5.34□□□□□ -1.55
USP47-203ENST00000399455 FAM240AA0A1B0GVK7 77 aa5.34□□□□□ -1.56
USP47-203ENST00000399455 A8MTW9 85 aa5.34□□□□□ -1.56
USP47-203ENST00000399455 ZNF861PO60384 105 aa5.33□□□□□ -1.56
USP47-203ENST00000399455 CXCL6P80162 114 aa5.33□□□□□ -1.56
USP47-203ENST00000399455 Q8N3U1 123 aa5.33□□□□□ -1.56
USP47-203ENST00000399455 SONP18583 2426 aaKnown RBP5.32□□□□□ -1.56
USP47-203ENST00000399455 RBM12B-AS1Q9P1G2 102 aa5.32□□□□□ -1.56
USP47-203ENST00000399455 ZNF575Q86XF7 245 aa5.32□□□□□ -1.56
USP47-203ENST00000399455 SSBP3-AS1Q7Z2R9 100 aa5.32□□□□□ -1.56
USP47-203ENST00000399455 ST20-AS1Q8NBB2 130 aa5.31□□□□□ -1.56
USP47-203ENST00000399455 MT-ATP8P03928 68 aa5.3□□□□□ -1.56
USP47-203ENST00000399455 ACYP2P14621 99 aa5.3□□□□□ -1.56
USP47-203ENST00000399455 C9orf163Q8N9P6 203 aa5.3□□□□□ -1.56
USP47-203ENST00000399455 C1orf64Q8NEQ6 169 aa5.3□□□□□ -1.56
USP47-203ENST00000399455 CACNA1AO00555 2505 aa5.3□□□□□ -1.56
USP47-203ENST00000399455 IGLV7-43P04211 117 aa5.3□□□□□ -1.56
USP47-203ENST00000399455 URB1-AS1Q96HZ7 61 aa5.3□□□□□ -1.56
USP47-203ENST00000399455 CCDC168Q8NDH2 2452 aa5.29□□□□□ -1.56
USP47-203ENST00000399455 IGLV1-50A0A075B6I6 118 aa5.29□□□□□ -1.56
USP47-203ENST00000399455 FAM168BA1KXE4 195 aa5.29□□□□□ -1.56
USP47-203ENST00000399455 Q9UF83 564 aa5.28□□□□□ -1.56
USP47-203ENST00000399455 TRAV22A0A0B4J277 110 aa5.28□□□□□ -1.56
USP47-203ENST00000399455 A0A0U1RQV1 116 aa5.28□□□□□ -1.56
USP47-203ENST00000399455 LINC00612Q8N6U2 182 aa5.28□□□□□ -1.56
USP47-203ENST00000399455 PLA2G2DQ9UNK4 145 aa5.28□□□□□ -1.56
USP47-203ENST00000399455 TRBV7-7A0A0K0K1E9 115 aa5.28□□□□□ -1.56
USP47-203ENST00000399455 ABCA2Q9BZC7 2435 aa5.27□□□□□ -1.57
USP47-203ENST00000399455 TLX1NBP0CAT3 122 aa5.27□□□□□ -1.57
USP47-203ENST00000399455 COX7CP15954 63 aa5.27□□□□□ -1.57
USP47-203ENST00000399455 CNBPP62633 177 aaKnown RBP5.27□□□□□ -1.57
USP47-203ENST00000399455 PRR34Q9NV39 138 aa5.26□□□□□ -1.57
USP47-203ENST00000399455 H3BPC8 53 aa5.26□□□□□ -1.57
USP47-203ENST00000399455 PSORS1C2Q9UIG4 136 aa5.26□□□□□ -1.57
USP47-203ENST00000399455 PIEZO2Q9H5I5 2752 aa5.26□□□□□ -1.57
USP47-203ENST00000399455 VPREB1P12018 145 aa5.25□□□□□ -1.57
USP47-203ENST00000399455 C15orf56Q8N910 161 aa5.25□□□□□ -1.57
USP47-203ENST00000399455 TRBV7-4A0A0J9YYF1 115 aa5.25□□□□□ -1.57
USP47-203ENST00000399455 C9orf92A6NGG3 77 aa5.25□□□□□ -1.57
USP47-203ENST00000399455 SERTAD4-AS1Q5TG53 156 aa5.25□□□□□ -1.57
USP47-203ENST00000399455 A0A096LNJ9 63 aa5.25□□□□□ -1.57
USP47-203ENST00000399455 KCNQ1DNQ9H478 68 aa5.24□□□□□ -1.57
USP47-203ENST00000399455 IGLV6-57P01721 117 aa5.24□□□□□ -1.57
USP47-203ENST00000399455 LOC110117498A0A087WWA1 95 aa5.24□□□□□ -1.57
USP47-203ENST00000399455 ANKRD17O75179 2603 aaKnown RBP5.24□□□□□ -1.57
USP47-203ENST00000399455 SMIM29Q86T20 159 aa5.23□□□□□ -1.57
USP47-203ENST00000399455 A8MWP4 228 aa5.23□□□□□ -1.57
USP47-203ENST00000399455 LOC101927531A0A1B0GV80 90 aa5.23□□□□□ -1.57
USP47-203ENST00000399455 GIG44P09565 113 aaPredicted RBP5.22□□□□□ -1.57
USP47-203ENST00000399455 A0A1B0GU69 56 aa5.22□□□□□ -1.57
USP47-203ENST00000399455 IGLV5-37A0A075B6J1 123 aa5.21□□□□□ -1.58
USP47-203ENST00000399455 TNP2Q05952 138 aa5.21□□□□□ -1.58
USP47-203ENST00000399455 MRPL34Q9BQ48 92 aaKnown RBP5.21□□□□□ -1.58
USP47-203ENST00000399455 OBSCN-AS1Q96MR7 158 aa5.21□□□□□ -1.58
USP47-203ENST00000399455 LCE6AA0A183 80 aa5.21□□□□□ -1.58
USP47-203ENST00000399455 WIPF1O43516 503 aa5.2□□□□□ -1.58
USP47-203ENST00000399455 ZNF462Q96JM2 2506 aa5.2□□□□□ -1.58
USP47-203ENST00000399455 DSCR10P59022 87 aa5.19□□□□□ -1.58
USP47-203ENST00000399455 Q6ZSA8 131 aa5.19□□□□□ -1.58
USP47-203ENST00000399455 LINC00310P59036 64 aa5.19□□□□□ -1.58
USP47-203ENST00000399455 Q6ZQT0 140 aa5.19□□□□□ -1.58
USP47-203ENST00000399455 C9orf129Q5T035 196 aaKnown RBP5.18□□□□□ -1.58
USP47-203ENST00000399455 TMEM254Q8TBM7 123 aa5.18□□□□□ -1.58
USP47-203ENST00000399455 M0R2T5 61 aa5.18□□□□□ -1.58
USP47-203ENST00000399455 LINC00846Q9NV44 126 aa5.18□□□□□ -1.58
USP47-203ENST00000399455 IGLV7-46A0A075B6I9 117 aa5.17□□□□□ -1.58
USP47-203ENST00000399455 SMIM26A0A096LP01 95 aa5.17□□□□□ -1.58
USP47-203ENST00000399455 SPRR4Q96PI1 79 aa5.17□□□□□ -1.58
USP47-203ENST00000399455 A0A087WVE0 104 aa5.17□□□□□ -1.58
USP47-203ENST00000399455 SOSTDC1Q6X4U4 206 aa5.16□□□□□ -1.58
USP47-203ENST00000399455 A0A1B0GVX0 72 aa5.15□□□□□ -1.58
USP47-203ENST00000399455 TLN1Q9Y490 2541 aaKnown RBP5.15□□□□□ -1.58
USP47-203ENST00000399455 A0A1W2PNN7 141 aa5.15□□□□□ -1.59
USP47-203ENST00000399455 IGFL1Q6UW32 110 aa5.15□□□□□ -1.59
USP47-203ENST00000399455 CD164Q04900 197 aa5.14□□□□□ -1.59
USP47-203ENST00000399455 ANKRD11Q6UB99 2663 aaPredicted RBP5.13□□□□□ -1.59
USP47-203ENST00000399455 KRTAP21-3Q3LHN1 58 aa5.13□□□□□ -1.59
USP47-203ENST00000399455 CR1P17927 2039 aa5.13□□□□□ -1.59
USP47-203ENST00000399455 FAM229BQ4G0N7 80 aa5.13□□□□□ -1.59
USP47-203ENST00000399455 C8orf17Q9NRJ1 99 aa5.13□□□□□ -1.59
USP47-203ENST00000399455 Q5VSD8 79 aa5.13□□□□□ -1.59
USP47-203ENST00000399455 FAM218AQ96MZ4 157 aa5.12□□□□□ -1.59
USP47-203ENST00000399455 OXTP01178 125 aa5.1□□□□□ -1.59
USP47-203ENST00000399455 ZFYVE26Q68DK2 2539 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms