RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 PRO3102Q9H379 93 aa3.57□□□□□ -1.84
TTC3-204ENST00000399017 C11orf1Q9H5F2 150 aa3.57□□□□□ -1.84
TTC3-204ENST00000399017 Q8N814 137 aa3.57□□□□□ -1.84
TTC3-204ENST00000399017 Q96NJ1 140 aa3.57□□□□□ -1.84
TTC3-204ENST00000399017 CRIPTQ9P021 101 aa3.57□□□□□ -1.84
TTC3-204ENST00000399017 A0A087WSZ3 146 aa3.56□□□□□ -1.84
TTC3-204ENST00000399017 LINC00304Q8N9R0 145 aa3.56□□□□□ -1.84
TTC3-204ENST00000399017 CRIP2P52943 208 aaPredicted RBP3.56□□□□□ -1.84
TTC3-204ENST00000399017 CXCL6P80162 114 aa3.56□□□□□ -1.84
TTC3-204ENST00000399017 CENPEQ02224 2701 aa3.56□□□□□ -1.84
TTC3-204ENST00000399017 TRBV10-3A0A0K0K1G6 114 aa3.56□□□□□ -1.84
TTC3-204ENST00000399017 C6orf48Q9UBA6 75 aa3.56□□□□□ -1.84
TTC3-204ENST00000399017 CSNK1G2-AS1Q8NCQ2 148 aa3.56□□□□□ -1.84
TTC3-204ENST00000399017 C22orf24Q9Y442 160 aa3.56□□□□□ -1.84
TTC3-204ENST00000399017 UNQ6190/PRO20217Q6UXQ8 127 aa3.55□□□□□ -1.84
TTC3-204ENST00000399017 LUZP6Q538Z0 58 aa3.55□□□□□ -1.84
TTC3-204ENST00000399017 PTH2Q96A98 100 aa3.55□□□□□ -1.84
TTC3-204ENST00000399017 LINC01554Q52M75 96 aa3.55□□□□□ -1.84
TTC3-204ENST00000399017 H3BPC8 53 aa3.55□□□□□ -1.84
TTC3-204ENST00000399017 C10orf91Q5T1B1 145 aa3.55□□□□□ -1.84
TTC3-204ENST00000399017 SMCR5Q8TEV8 140 aa3.55□□□□□ -1.84
TTC3-204ENST00000399017 HRES1P13985 223 aa3.54□□□□□ -1.84
TTC3-204ENST00000399017 TEX15Q9BXT5 2789 aa3.54□□□□□ -1.84
TTC3-204ENST00000399017 PATE2Q6UY27 113 aa3.54□□□□□ -1.84
TTC3-204ENST00000399017 MAPKAPK5-AS1Q8N8E1 139 aa3.54□□□□□ -1.84
TTC3-204ENST00000399017 TP73-AS1Q9UF72 201 aa3.54□□□□□ -1.84
TTC3-204ENST00000399017 NOTCH1P46531 2555 aa3.54□□□□□ -1.84
TTC3-204ENST00000399017 A0A1W2PNU3 283 aaPredicted RBP3.54□□□□□ -1.84
TTC3-204ENST00000399017 EIF4EBP3O60516 100 aaPredicted RBP3.54□□□□□ -1.84
TTC3-204ENST00000399017 C18orf65Q6ZTR6 163 aa3.54□□□□□ -1.84
TTC3-204ENST00000399017 Q8N6K4 173 aa3.54□□□□□ -1.84
TTC3-204ENST00000399017 NBEAL1Q6ZS30 2694 aa3.54□□□□□ -1.84
TTC3-204ENST00000399017 DEFB1P60022 68 aa3.54□□□□□ -1.84
TTC3-204ENST00000399017 ODF3L2Q3SX64 289 aa3.54□□□□□ -1.84
TTC3-204ENST00000399017 LINC00526Q96FQ7 95 aa3.54□□□□□ -1.84
TTC3-204ENST00000399017 BCE1O60756 84 aa3.53□□□□□ -1.84
TTC3-204ENST00000399017 FXYD2P54710 66 aa3.53□□□□□ -1.84
TTC3-204ENST00000399017 ITPR3Q14573 2671 aa3.53□□□□□ -1.84
TTC3-204ENST00000399017 TSHBP01222 138 aa3.53□□□□□ -1.84
TTC3-204ENST00000399017 SSBP3-AS1Q7Z2R9 100 aa3.53□□□□□ -1.84
TTC3-204ENST00000399017 LINC00315P59091 139 aa3.53□□□□□ -1.84
TTC3-204ENST00000399017 IGLV5-37A0A075B6J1 123 aa3.53□□□□□ -1.84
TTC3-204ENST00000399017 TRBV7-7A0A0K0K1E9 115 aa3.53□□□□□ -1.85
TTC3-204ENST00000399017 LINC00483Q53H64 154 aa3.52□□□□□ -1.85
TTC3-204ENST00000399017 CNFNQ9BYD5 112 aa3.52□□□□□ -1.85
TTC3-204ENST00000399017 SMR3BP02814 79 aaPredicted RBP3.52□□□□□ -1.85
TTC3-204ENST00000399017 C10orf142B7Z368 130 aa3.52□□□□□ -1.85
TTC3-204ENST00000399017 C1orf64Q8NEQ6 169 aa3.52□□□□□ -1.85
TTC3-204ENST00000399017 IGHV3OR16-9A0A0B4J2B5 98 aa3.51□□□□□ -1.85
TTC3-204ENST00000399017 Q6ZSA8 131 aa3.51□□□□□ -1.85
TTC3-204ENST00000399017 BEAN1Q3B7T3 259 aa3.51□□□□□ -1.85
TTC3-204ENST00000399017 C10orf99Q6UWK7 81 aa3.51□□□□□ -1.85
TTC3-204ENST00000399017 DNAH10OSP0CZ25 163 aa3.51□□□□□ -1.85
TTC3-204ENST00000399017 ZNF80P51504 273 aaPredicted RBP3.51□□□□□ -1.85
TTC3-204ENST00000399017 LOC101927531A0A1B0GV80 90 aa3.51□□□□□ -1.85
TTC3-204ENST00000399017 UNC79Q9P2D8 2635 aa3.51□□□□□ -1.85
TTC3-204ENST00000399017 Q6ZS46 218 aa3.5□□□□□ -1.85
TTC3-204ENST00000399017 AVPP01185 164 aa3.5□□□□□ -1.85
TTC3-204ENST00000399017 WFDC2Q14508 124 aa3.5□□□□□ -1.85
TTC3-204ENST00000399017 Q6ZRU5 148 aa3.5□□□□□ -1.85
TTC3-204ENST00000399017 ZNF295-AS1Q8N0V1 137 aa3.5□□□□□ -1.85
TTC3-204ENST00000399017 PCOTHQ58A44 107 aa3.5□□□□□ -1.85
TTC3-204ENST00000399017 POLR2KP53803 58 aaKnown RBP3.5□□□□□ -1.85
TTC3-204ENST00000399017 FLNAP21333 2647 aaKnown RBP3.5□□□□□ -1.85
TTC3-204ENST00000399017 COX7CP15954 63 aa3.5□□□□□ -1.85
TTC3-204ENST00000399017 PLA2G2DQ9UNK4 145 aa3.5□□□□□ -1.85
TTC3-204ENST00000399017 SOSTDC1Q6X4U4 206 aa3.5□□□□□ -1.85
TTC3-204ENST00000399017 KRTAP24-1Q3LI83 254 aa3.49□□□□□ -1.85
TTC3-204ENST00000399017 COL4A2P08572 1712 aa3.49□□□□□ -1.85
TTC3-204ENST00000399017 C2orf91Q6ZV80 131 aa3.49□□□□□ -1.85
TTC3-204ENST00000399017 CAMK2N1Q7Z7J9 78 aa3.49□□□□□ -1.85
TTC3-204ENST00000399017 Q8N3U1 123 aa3.49□□□□□ -1.85
TTC3-204ENST00000399017 PRO0628Q9UI54 55 aa3.49□□□□□ -1.85
TTC3-204ENST00000399017 SETXQ7Z333 2677 aaKnown RBP3.49□□□□□ -1.85
TTC3-204ENST00000399017 KRTAP10-9P60411 292 aa3.49□□□□□ -1.85
TTC3-204ENST00000399017 ITPR2Q14571 2701 aa3.48□□□□□ -1.85
TTC3-204ENST00000399017 SMIM1B2RUZ4 78 aa3.48□□□□□ -1.85
TTC3-204ENST00000399017 ZNF861PO60384 105 aa3.48□□□□□ -1.85
TTC3-204ENST00000399017 KTN1-AS1Q86SY8 53 aa3.48□□□□□ -1.85
TTC3-204ENST00000399017 ZNF575Q86XF7 245 aa3.48□□□□□ -1.85
TTC3-204ENST00000399017 PLAC4Q8WY50 150 aa3.48□□□□□ -1.85
TTC3-204ENST00000399017 LINC00242Q5T6M2 205 aa3.47□□□□□ -1.85
TTC3-204ENST00000399017 LITAFQ99732 161 aa3.47□□□□□ -1.85
TTC3-204ENST00000399017 CHTF8P0CG12 524 aa3.47□□□□□ -1.85
TTC3-204ENST00000399017 LINC00167Q96N53 147 aa3.47□□□□□ -1.85
TTC3-204ENST00000399017 A0A0C4DFX4 3053 aa3.47□□□□□ -1.85
TTC3-204ENST00000399017 SEC61BP60468 96 aaKnown RBP3.47□□□□□ -1.85
TTC3-204ENST00000399017 BRCA2P51587 3418 aa3.46□□□□□ -1.86
TTC3-204ENST00000399017 GVQW2A0A096LPI5 108 aaPredicted RBP3.46□□□□□ -1.86
TTC3-204ENST00000399017 IGLV1-50A0A075B6I6 118 aa3.46□□□□□ -1.86
TTC3-204ENST00000399017 FAM19A4Q96LR4 140 aa3.46□□□□□ -1.86
TTC3-204ENST00000399017 C8orf17Q9NRJ1 99 aa3.46□□□□□ -1.86
TTC3-204ENST00000399017 DEFB116Q30KQ4 102 aa3.46□□□□□ -1.86
TTC3-204ENST00000399017 TM2D3Q9BRN9 247 aa3.46□□□□□ -1.86
TTC3-204ENST00000399017 APLNQ9ULZ1 77 aa3.46□□□□□ -1.86
TTC3-204ENST00000399017 UQCR11O14957 56 aa3.46□□□□□ -1.86
TTC3-204ENST00000399017 PHF5AQ7RTV0 110 aaKnown RBP3.46□□□□□ -1.86
TTC3-204ENST00000399017 CFAP54Q96N23 3096 aa3.45□□□□□ -1.86
TTC3-204ENST00000399017 LINC00588Q9Y4M8 146 aa3.45□□□□□ -1.86
TTC3-204ENST00000399017 MKI67P46013 3256 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms