RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 SND1-IT1Q9HBX3 110 aa8.77□□□□□ -1.01
HDDC2-202ENST00000398153 ATP6V1G1O75348 118 aa8.76□□□□□ -1.01
HDDC2-202ENST00000398153 NMUP48645 174 aa8.76□□□□□ -1.01
HDDC2-202ENST00000398153 PET117Q6UWS5 81 aa8.76□□□□□ -1.01
HDDC2-202ENST00000398153 NKAPP1Q8N9T2 125 aa8.76□□□□□ -1.01
HDDC2-202ENST00000398153 NDUFA12Q9UI09 145 aa8.76□□□□□ -1.01
HDDC2-202ENST00000398153 LINC00158P58513 81 aa8.75□□□□□ -1.01
HDDC2-202ENST00000398153 KRTAP11-1Q8IUC1 163 aa8.75□□□□□ -1.01
HDDC2-202ENST00000398153 J3QQQ9 107 aa8.74□□□□□ -1.01
HDDC2-202ENST00000398153 LINC01545Q5VT33 79 aa8.74□□□□□ -1.01
HDDC2-202ENST00000398153 DIRC1Q969H9 104 aa8.74□□□□□ -1.01
HDDC2-202ENST00000398153 LINC01600Q96MT4 127 aa8.74□□□□□ -1.01
HDDC2-202ENST00000398153 MEIG1Q5JSS6 88 aa8.73□□□□□ -1.01
HDDC2-202ENST00000398153 LINC00167Q96N53 147 aa8.73□□□□□ -1.01
HDDC2-202ENST00000398153 PMCHL2Q9BQD1 86 aa8.73□□□□□ -1.01
HDDC2-202ENST00000398153 LRP1Q07954 4544 aaKnown RBP8.73□□□□□ -1.01
HDDC2-202ENST00000398153 VPREB1P12018 145 aa8.72□□□□□ -1.01
HDDC2-202ENST00000398153 AKR1D1P51857 326 aa8.72□□□□□ -1.01
HDDC2-202ENST00000398153 FAT3Q8TDW7 4589 aa8.72□□□□□ -1.01
HDDC2-202ENST00000398153 E9PLD3 99 aa8.71□□□□□ -1.02
HDDC2-202ENST00000398153 SMIM13P0DJ93 91 aa8.71□□□□□ -1.02
HDDC2-202ENST00000398153 LGALS3P17931 250 aaKnown RBP8.71□□□□□ -1.02
HDDC2-202ENST00000398153 C3orf79P0CE67 100 aa8.7□□□□□ -1.02
HDDC2-202ENST00000398153 TSPEAR-AS2P59090 65 aa8.7□□□□□ -1.02
HDDC2-202ENST00000398153 H0Y9J4 135 aa8.69□□□□□ -1.02
HDDC2-202ENST00000398153 ZNF861PO60384 105 aa8.69□□□□□ -1.02
HDDC2-202ENST00000398153 BCE1O60756 84 aa8.69□□□□□ -1.02
HDDC2-202ENST00000398153 MT1HL1P0DM35 61 aa8.69□□□□□ -1.02
HDDC2-202ENST00000398153 MIR7-3HGQ8N6C7 128 aa8.69□□□□□ -1.02
HDDC2-202ENST00000398153 HERC1Q15751 4861 aa8.68□□□□□ -1.02
HDDC2-202ENST00000398153 IGLV1-50A0A075B6I6 118 aa8.68□□□□□ -1.02
HDDC2-202ENST00000398153 LOC107984156A0A0G2JMH3 177 aa8.68□□□□□ -1.02
HDDC2-202ENST00000398153 A0A0U1RRA0 63 aa8.68□□□□□ -1.02
HDDC2-202ENST00000398153 C20orf202A1L168 122 aa8.68□□□□□ -1.02
HDDC2-202ENST00000398153 RPL37AP8A6NKH3 93 aa8.68□□□□□ -1.02
HDDC2-202ENST00000398153 ARL17AQ8IVW1 177 aa8.68□□□□□ -1.02
HDDC2-202ENST00000398153 IGKV2D-26A0A0A0MRZ7 120 aa8.67□□□□□ -1.02
HDDC2-202ENST00000398153 RPL28P46779 137 aaKnown RBP8.67□□□□□ -1.02
HDDC2-202ENST00000398153 KRTDAPP60985 99 aa8.67□□□□□ -1.02
HDDC2-202ENST00000398153 GAGE10A6NGK3 116 aa8.66□□□□□ -1.02
HDDC2-202ENST00000398153 M0R378 163 aa8.66□□□□□ -1.02
HDDC2-202ENST00000398153 KRTAP10-8P60410 259 aa8.65□□□□□ -1.02
HDDC2-202ENST00000398153 BOD1L2Q8IYS8 172 aa8.65□□□□□ -1.02
HDDC2-202ENST00000398153 IGKV2-28A0A075B6P5 120 aa8.64□□□□□ -1.03
HDDC2-202ENST00000398153 IGKV2D-28P01615 120 aa8.64□□□□□ -1.03
HDDC2-202ENST00000398153 S100A6P06703 90 aa8.64□□□□□ -1.03
HDDC2-202ENST00000398153 A0A0J9YXY3 114 aa8.63□□□□□ -1.03
HDDC2-202ENST00000398153 S100A2P29034 98 aa8.63□□□□□ -1.03
HDDC2-202ENST00000398153 Q8NDZ9 215 aa8.63□□□□□ -1.03
HDDC2-202ENST00000398153 MIEN1Q9BRT3 115 aa8.63□□□□□ -1.03
HDDC2-202ENST00000398153 SNRPEP62304 92 aaKnown RBP8.62□□□□□ -1.03
HDDC2-202ENST00000398153 HIST3H2BBQ8N257 126 aa8.62□□□□□ -1.03
HDDC2-202ENST00000398153 TMEM126AQ9H061 195 aa8.62□□□□□ -1.03
HDDC2-202ENST00000398153 TRBV10-2A0A0K0K1G8 114 aa8.61□□□□□ -1.03
HDDC2-202ENST00000398153 TIMM17BO60830 172 aa8.61□□□□□ -1.03
HDDC2-202ENST00000398153 NDUFC2O95298 119 aa8.61□□□□□ -1.03
HDDC2-202ENST00000398153 UBE2AP49459 152 aa8.61□□□□□ -1.03
HDDC2-202ENST00000398153 KRTAP13-1Q8IUC0 172 aa8.61□□□□□ -1.03
HDDC2-202ENST00000398153 S100A12P80511 92 aa8.6□□□□□ -1.03
HDDC2-202ENST00000398153 HIST1H2BLQ99880 126 aa8.6□□□□□ -1.03
HDDC2-202ENST00000398153 PRYO14603 147 aa8.59□□□□□ -1.03
HDDC2-202ENST00000398153 KRTAP1-4P0C5Y4 121 aa8.59□□□□□ -1.03
HDDC2-202ENST00000398153 RPL13AP40429 203 aaKnown RBP8.59□□□□□ -1.03
HDDC2-202ENST00000398153 DAND5Q8N907 189 aa8.59□□□□□ -1.03
HDDC2-202ENST00000398153 ZNF815PA8K554 130 aa8.58□□□□□ -1.04
HDDC2-202ENST00000398153 KCNQ1DNQ9H478 68 aa8.58□□□□□ -1.04
HDDC2-202ENST00000398153 SPANXB1Q9NS25 103 aaPredicted RBP8.58□□□□□ -1.04
HDDC2-202ENST00000398153 TMEM238C9JI98 176 aa8.57□□□□□ -1.04
HDDC2-202ENST00000398153 ADAMTSL4-AS1Q5T5F5 129 aa8.57□□□□□ -1.04
HDDC2-202ENST00000398153 FAM19A1Q7Z5A9 133 aa8.57□□□□□ -1.04
HDDC2-202ENST00000398153 TNXBP22105 4242 aa8.56□□□□□ -1.04
HDDC2-202ENST00000398153 NCR3O14931 201 aa8.56□□□□□ -1.04
HDDC2-202ENST00000398153 LINC00337Q8N6G1 96 aa8.56□□□□□ -1.04
HDDC2-202ENST00000398153 LITAFQ99732 161 aa8.56□□□□□ -1.04
HDDC2-202ENST00000398153 SPRR1AP35321 89 aa8.55□□□□□ -1.04
HDDC2-202ENST00000398153 CBY1Q9Y3M2 126 aa8.55□□□□□ -1.04
HDDC2-202ENST00000398153 TRBV10-3A0A0K0K1G6 114 aa8.54□□□□□ -1.04
HDDC2-202ENST00000398153 C5orf52A6NGY3 159 aa8.54□□□□□ -1.04
HDDC2-202ENST00000398153 PRR26Q8N8Z3 221 aa8.54□□□□□ -1.04
HDDC2-202ENST00000398153 COPS9Q8WXC6 57 aa8.54□□□□□ -1.04
HDDC2-202ENST00000398153 SPANXCQ9NY87 97 aa8.54□□□□□ -1.04
HDDC2-202ENST00000398153 DDTP30046 118 aa8.53□□□□□ -1.04
HDDC2-202ENST00000398153 PRLHP81277 87 aa8.53□□□□□ -1.04
HDDC2-202ENST00000398153 ANKRD39Q53RE8 183 aa8.53□□□□□ -1.04
HDDC2-202ENST00000398153 SOSTDC1Q6X4U4 206 aa8.53□□□□□ -1.04
HDDC2-202ENST00000398153 SCGB1D4Q6XE38 83 aa8.53□□□□□ -1.04
HDDC2-202ENST00000398153 Q6ZVH6 145 aa8.53□□□□□ -1.04
HDDC2-202ENST00000398153 ATOH7Q8N100 152 aa8.53□□□□□ -1.04
HDDC2-202ENST00000398153 LINC00308Q8TCZ7 52 aa8.53□□□□□ -1.04
HDDC2-202ENST00000398153 PPDPFQ9H3Y8 114 aa8.53□□□□□ -1.04
HDDC2-202ENST00000398153 HSBP1L1C9JCN9 74 aa8.52□□□□□ -1.05
HDDC2-202ENST00000398153 IGLV6-57P01721 117 aa8.52□□□□□ -1.05
HDDC2-202ENST00000398153 FAM229BQ4G0N7 80 aa8.52□□□□□ -1.05
HDDC2-202ENST00000398153 S100A7L2Q5SY68 101 aa8.52□□□□□ -1.05
HDDC2-202ENST00000398153 KRTAP4-16G5E9R7 235 aaPredicted RBP8.51□□□□□ -1.05
HDDC2-202ENST00000398153 CRYGAP11844 174 aa8.51□□□□□ -1.05
HDDC2-202ENST00000398153 LINC00518Q8N0U6 118 aa8.51□□□□□ -1.05
HDDC2-202ENST00000398153 SPANXDQ9BXN6 97 aa8.51□□□□□ -1.05
HDDC2-202ENST00000398153 TTTY13Q9BZ97 58 aa8.51□□□□□ -1.05
HDDC2-202ENST00000398153 ETDCA0A1B0GVM5 59 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms