RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 Q6ZRU5 148 aa7.64□□□□□ -1.19
HPS4-202ENST00000398145 LYPD5Q6UWN5 251 aa7.63□□□□□ -1.19
HPS4-202ENST00000398145 FASNP49327 2511 aaKnown RBP7.63□□□□□ -1.19
HPS4-202ENST00000398145 C10orf25Q5T742 122 aa7.62□□□□□ -1.19
HPS4-202ENST00000398145 PSPHP1O15172 72 aa7.62□□□□□ -1.19
HPS4-202ENST00000398145 LY6G6DO95868 133 aa7.62□□□□□ -1.19
HPS4-202ENST00000398145 NANOS2P60321 138 aaKnown RBP7.62□□□□□ -1.19
HPS4-202ENST00000398145 PMAIP1Q13794 54 aa7.62□□□□□ -1.19
HPS4-202ENST00000398145 EYSQ5T1H1 3165 aa7.62□□□□□ -1.19
HPS4-202ENST00000398145 F8WDY8 70 aa7.61□□□□□ -1.19
HPS4-202ENST00000398145 CDH23Q9H251 3354 aa7.61□□□□□ -1.19
HPS4-202ENST00000398145 Q6ZTC4 211 aa7.6□□□□□ -1.19
HPS4-202ENST00000398145 XIRP2A4UGR9 3374 aa7.6□□□□□ -1.19
HPS4-202ENST00000398145 C6orf48Q9UBA6 75 aa7.6□□□□□ -1.19
HPS4-202ENST00000398145 A0A087WSZ3 146 aa7.59□□□□□ -1.19
HPS4-202ENST00000398145 LINC01600Q96MT4 127 aa7.59□□□□□ -1.19
HPS4-202ENST00000398145 TM2D3Q9BRN9 247 aa7.59□□□□□ -1.19
HPS4-202ENST00000398145 OXLD1Q5BKU9 147 aa7.59□□□□□ -1.19
HPS4-202ENST00000398145 REG3GQ6UW15 175 aa7.59□□□□□ -1.19
HPS4-202ENST00000398145 TRIOO75962 3097 aa7.59□□□□□ -1.19
HPS4-202ENST00000398145 PRUNE2Q8WUY3 3088 aa7.59□□□□□ -1.2
HPS4-202ENST00000398145 KIAA0087Q14695 138 aa7.58□□□□□ -1.2
HPS4-202ENST00000398145 ELOF1P60002 83 aaKnown RBP7.58□□□□□ -1.2
HPS4-202ENST00000398145 HCG22E2RYF7 251 aa7.58□□□□□ -1.2
HPS4-202ENST00000398145 CASC2Q6XLA1 102 aa7.58□□□□□ -1.2
HPS4-202ENST00000398145 SMIM29Q86T20 159 aa7.58□□□□□ -1.2
HPS4-202ENST00000398145 VPS13AQ96RL7 3174 aa7.57□□□□□ -1.2
HPS4-202ENST00000398145 PRR15LQ9BU68 103 aa7.57□□□□□ -1.2
HPS4-202ENST00000398145 RETNQ9HD89 108 aa7.57□□□□□ -1.2
HPS4-202ENST00000398145 CENPEQ02224 2701 aa7.57□□□□□ -1.2
HPS4-202ENST00000398145 VCANP13611 3396 aa7.56□□□□□ -1.2
HPS4-202ENST00000398145 SMR3AQ99954 134 aa7.56□□□□□ -1.2
HPS4-202ENST00000398145 WDFY4Q6ZS81 3184 aa7.56□□□□□ -1.2
HPS4-202ENST00000398145 DEFB116Q30KQ4 102 aa7.56□□□□□ -1.2
HPS4-202ENST00000398145 X6R8D5 127 aa7.56□□□□□ -1.2
HPS4-202ENST00000398145 MGAQ8IWI9 3026 aa7.55□□□□□ -1.2
HPS4-202ENST00000398145 A0A1B0GW54 56 aa7.55□□□□□ -1.2
HPS4-202ENST00000398145 PLAC8L1A1L4L8 177 aa7.55□□□□□ -1.2
HPS4-202ENST00000398145 C7orf33Q8WU49 177 aa7.55□□□□□ -1.2
HPS4-202ENST00000398145 hDV103S1A0JD37 113 aa7.54□□□□□ -1.2
HPS4-202ENST00000398145 H0Y9P7 68 aa7.54□□□□□ -1.2
HPS4-202ENST00000398145 C4orf48Q5BLP8 95 aa7.54□□□□□ -1.2
HPS4-202ENST00000398145 SPINK6Q6UWN8 80 aa7.54□□□□□ -1.2
HPS4-202ENST00000398145 SEC61GP60059 68 aa7.54□□□□□ -1.2
HPS4-202ENST00000398145 IGLV9-49A0A0B4J1Y8 123 aa7.53□□□□□ -1.2
HPS4-202ENST00000398145 FSHBP01225 129 aa7.53□□□□□ -1.2
HPS4-202ENST00000398145 IGLV6-57P01721 117 aa7.53□□□□□ -1.2
HPS4-202ENST00000398145 Q9BRP9 147 aa7.53□□□□□ -1.2
HPS4-202ENST00000398145 KLKP1Q107X0 134 aa7.52□□□□□ -1.21
HPS4-202ENST00000398145 C9orf129Q5T035 196 aaKnown RBP7.52□□□□□ -1.21
HPS4-202ENST00000398145 C22orf24Q9Y442 160 aa7.51□□□□□ -1.21
HPS4-202ENST00000398145 ZNF706Q9Y5V0 76 aaPredicted RBP7.51□□□□□ -1.21
HPS4-202ENST00000398145 Q8NBF4 154 aa7.51□□□□□ -1.21
HPS4-202ENST00000398145 USP24Q9UPU5 2620 aa7.5□□□□□ -1.21
HPS4-202ENST00000398145 GVQW2A0A096LPI5 108 aaPredicted RBP7.5□□□□□ -1.21
HPS4-202ENST00000398145 LINC00474Q9P2X8 69 aa7.5□□□□□ -1.21
HPS4-202ENST00000398145 IL17DQ8TAD2 202 aa7.5□□□□□ -1.21
HPS4-202ENST00000398145 PCOTHQ58A44 107 aa7.49□□□□□ -1.21
HPS4-202ENST00000398145 NBEAQ8NFP9 2946 aa7.49□□□□□ -1.21
HPS4-202ENST00000398145 PRLHP81277 87 aa7.49□□□□□ -1.21
HPS4-202ENST00000398145 ERC2-IT1O76042 136 aa7.49□□□□□ -1.21
HPS4-202ENST00000398145 LINC01556Q5JQF7 62 aa7.49□□□□□ -1.21
HPS4-202ENST00000398145 LINC00167Q96N53 147 aa7.48□□□□□ -1.21
HPS4-202ENST00000398145 USP34Q70CQ2 3546 aa7.48□□□□□ -1.21
HPS4-202ENST00000398145 H7BZZ5 65 aa7.48□□□□□ -1.21
HPS4-202ENST00000398145 CSNK1G2-AS1Q8NCQ2 148 aa7.48□□□□□ -1.21
HPS4-202ENST00000398145 LIMD2Q9BT23 127 aa7.48□□□□□ -1.21
HPS4-202ENST00000398145 DSPP15924 2871 aaKnown RBP7.48□□□□□ -1.21
HPS4-202ENST00000398145 C1orf64Q8NEQ6 169 aa7.48□□□□□ -1.21
HPS4-202ENST00000398145 VPREB1P12018 145 aa7.47□□□□□ -1.21
HPS4-202ENST00000398145 SZT2Q5T011 3432 aa7.47□□□□□ -1.21
HPS4-202ENST00000398145 Q6ZRX8 168 aa7.47□□□□□ -1.21
HPS4-202ENST00000398145 FAM104AQ969W3 186 aa7.45□□□□□ -1.22
HPS4-202ENST00000398145 IGHV6-1A0A0B4J1U7 121 aa7.45□□□□□ -1.22
HPS4-202ENST00000398145 GIG44P09565 113 aaPredicted RBP7.45□□□□□ -1.22
HPS4-202ENST00000398145 FRYQ5TBA9 3013 aa7.45□□□□□ -1.22
HPS4-202ENST00000398145 H3BNG1 76 aa7.44□□□□□ -1.22
HPS4-202ENST00000398145 MAP1AP78559 2803 aaPredicted RBP7.44□□□□□ -1.22
HPS4-202ENST00000398145 LINC00336Q6ZUF6 198 aa7.44□□□□□ -1.22
HPS4-202ENST00000398145 OBSCN-AS1Q96MR7 158 aa7.44□□□□□ -1.22
HPS4-202ENST00000398145 TRBV7-4A0A0J9YYF1 115 aa7.43□□□□□ -1.22
HPS4-202ENST00000398145 Q8NAQ8 132 aa7.43□□□□□ -1.22
HPS4-202ENST00000398145 LINC00528Q8N1L1 170 aa7.43□□□□□ -1.22
HPS4-202ENST00000398145 AKAP13Q12802 2813 aa7.43□□□□□ -1.22
HPS4-202ENST00000398145 LINC00476Q8WZB0 136 aa7.42□□□□□ -1.22
HPS4-202ENST00000398145 LAMA1P25391 3075 aa7.42□□□□□ -1.22
HPS4-202ENST00000398145 Q6ZRP5 223 aa7.42□□□□□ -1.22
HPS4-202ENST00000398145 FLNAP21333 2647 aaKnown RBP7.41□□□□□ -1.22
HPS4-202ENST00000398145 ST20-AS1Q8NBB2 130 aa7.41□□□□□ -1.22
HPS4-202ENST00000398145 FREM2Q5SZK8 3169 aa7.4□□□□□ -1.22
HPS4-202ENST00000398145 H3BPC8 53 aa7.4□□□□□ -1.22
HPS4-202ENST00000398145 CELSR3Q9NYQ7 3312 aa7.4□□□□□ -1.22
HPS4-202ENST00000398145 M0R2N4 97 aa7.4□□□□□ -1.22
HPS4-202ENST00000398145 C19orf73Q9NVV2 129 aa7.4□□□□□ -1.22
HPS4-202ENST00000398145 PRR34Q9NV39 138 aa7.4□□□□□ -1.23
HPS4-202ENST00000398145 ZNF292O60281 2723 aa7.39□□□□□ -1.23
HPS4-202ENST00000398145 A0A096LNT2 108 aa7.39□□□□□ -1.23
HPS4-202ENST00000398145 DNAH14Q0VDD8 3507 aa7.38□□□□□ -1.23
HPS4-202ENST00000398145 KCNQ1DNQ9H478 68 aa7.38□□□□□ -1.23
HPS4-202ENST00000398145 LINC00612Q8N6U2 182 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms