RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 NMUP48645 174 aa15.97■□□□□ 0.15
U2AF1-203ENST00000398137 ANKRD39Q53RE8 183 aa15.97■□□□□ 0.15
U2AF1-203ENST00000398137 MEIG1Q5JSS6 88 aa15.97■□□□□ 0.15
U2AF1-203ENST00000398137 A0A0U1RRA0 63 aa15.96■□□□□ 0.15
U2AF1-203ENST00000398137 COX17Q14061 63 aa15.96■□□□□ 0.15
U2AF1-203ENST00000398137 FAM19A5Q7Z5A7 132 aaPredicted RBP15.96■□□□□ 0.15
U2AF1-203ENST00000398137 HNRNPA3P51991 378 aaKnown RBP15.95■□□□□ 0.14
U2AF1-203ENST00000398137 LINC00158P58513 81 aa15.95■□□□□ 0.14
U2AF1-203ENST00000398137 SMIM13P0DJ93 91 aa15.94■□□□□ 0.14
U2AF1-203ENST00000398137 TTTY13Q9BZ97 58 aa15.92■□□□□ 0.14
U2AF1-203ENST00000398137 SND1-IT1Q9HBX3 110 aa15.92■□□□□ 0.14
U2AF1-203ENST00000398137 RPL37AP61513 92 aaKnown RBP15.91■□□□□ 0.14
U2AF1-203ENST00000398137 KRTAP7-1Q8IUC3 87 aa15.91■□□□□ 0.14
U2AF1-203ENST00000398137 SERTAD4-AS1Q5TG53 156 aa15.9■□□□□ 0.14
U2AF1-203ENST00000398137 ZNF815PA8K554 130 aa15.89■□□□□ 0.13
U2AF1-203ENST00000398137 LINC00587B1AMM8 73 aa15.88■□□□□ 0.13
U2AF1-203ENST00000398137 HSBP1L1C9JCN9 74 aa15.88■□□□□ 0.13
U2AF1-203ENST00000398137 A0A0J9YXY3 114 aa15.87■□□□□ 0.13
U2AF1-203ENST00000398137 M0QXV9 152 aa15.87■□□□□ 0.13
U2AF1-203ENST00000398137 PHF5AQ7RTV0 110 aaKnown RBP15.87■□□□□ 0.13
U2AF1-203ENST00000398137 MIR7-3HGQ8N6C7 128 aa15.87■□□□□ 0.13
U2AF1-203ENST00000398137 C7orf33Q8WU49 177 aa15.87■□□□□ 0.13
U2AF1-203ENST00000398137 DAND5Q8N907 189 aa15.84■□□□□ 0.13
U2AF1-203ENST00000398137 OXTP01178 125 aa15.83■□□□□ 0.12
U2AF1-203ENST00000398137 JOSD1Q15040 202 aaPredicted RBP15.83■□□□□ 0.12
U2AF1-203ENST00000398137 PCP2Q8IVA1 136 aa15.83■□□□□ 0.12
U2AF1-203ENST00000398137 PLA2G2DQ9UNK4 145 aa15.82■□□□□ 0.12
U2AF1-203ENST00000398137 C22orf24Q9Y442 160 aa15.8■□□□□ 0.12
U2AF1-203ENST00000398137 Q8NDZ9 215 aa15.79■□□□□ 0.12
U2AF1-203ENST00000398137 HMCN2Q8NDA2 5059 aa15.78■□□□□ 0.12
U2AF1-203ENST00000398137 VPREB1P12018 145 aa15.78■□□□□ 0.12
U2AF1-203ENST00000398137 ADAMTSL4-AS1Q5T5F5 129 aa15.78■□□□□ 0.12
U2AF1-203ENST00000398137 IGLV5-37A0A075B6J1 123 aa15.77■□□□□ 0.12
U2AF1-203ENST00000398137 SCGB1D4Q6XE38 83 aa15.77■□□□□ 0.12
U2AF1-203ENST00000398137 NKAPP1Q8N9T2 125 aa15.77■□□□□ 0.12
U2AF1-203ENST00000398137 LITAFQ99732 161 aa15.77■□□□□ 0.12
U2AF1-203ENST00000398137 TIMM17BO60830 172 aa15.76■□□□□ 0.11
U2AF1-203ENST00000398137 BOD1L2Q8IYS8 172 aa15.76■□□□□ 0.11
U2AF1-203ENST00000398137 TP73-AS1Q9UF72 201 aa15.76■□□□□ 0.11
U2AF1-203ENST00000398137 UBE2BP63146 152 aa15.75■□□□□ 0.11
U2AF1-203ENST00000398137 PYY3Q5JQD4 70 aa15.75■□□□□ 0.11
U2AF1-203ENST00000398137 MRPL55Q7Z7F7 128 aaKnown RBP15.75■□□□□ 0.11
U2AF1-203ENST00000398137 KRTAP11-1Q8IUC1 163 aa15.75■□□□□ 0.11
U2AF1-203ENST00000398137 NPC2P61916 151 aa15.74■□□□□ 0.11
U2AF1-203ENST00000398137 PRR3P79522 188 aaKnown RBP15.74■□□□□ 0.11
U2AF1-203ENST00000398137 RPL24P83731 157 aaKnown RBP15.74■□□□□ 0.11
U2AF1-203ENST00000398137 GAGE10A6NGK3 116 aa15.73■□□□□ 0.11
U2AF1-203ENST00000398137 LBHQ53QV2 105 aaPredicted RBP15.73■□□□□ 0.11
U2AF1-203ENST00000398137 VAMP8Q9BV40 100 aa15.73■□□□□ 0.11
U2AF1-203ENST00000398137 PAM16Q9Y3D7 125 aa15.73■□□□□ 0.11
U2AF1-203ENST00000398137 MIEN1Q9BRT3 115 aa15.72■□□□□ 0.11
U2AF1-203ENST00000398137 SOSTDC1Q6X4U4 206 aa15.71■□□□□ 0.11
U2AF1-203ENST00000398137 MT1HL1P0DM35 61 aa15.7■□□□□ 0.1
U2AF1-203ENST00000398137 SPATA45Q537H7 98 aa15.7■□□□□ 0.1
U2AF1-203ENST00000398137 LINC00167Q96N53 147 aa15.7■□□□□ 0.1
U2AF1-203ENST00000398137 PSORS1C2Q9UIG4 136 aa15.7■□□□□ 0.1
U2AF1-203ENST00000398137 LOC107984156A0A0G2JMH3 177 aa15.69■□□□□ 0.1
U2AF1-203ENST00000398137 TMEM238C9JI98 176 aa15.69■□□□□ 0.1
U2AF1-203ENST00000398137 EIF4EBP3O60516 100 aaPredicted RBP15.69■□□□□ 0.1
U2AF1-203ENST00000398137 ARL17AQ8IVW1 177 aa15.69■□□□□ 0.1
U2AF1-203ENST00000398137 RPL37AP8A6NKH3 93 aa15.68■□□□□ 0.1
U2AF1-203ENST00000398137 NCR3O14931 201 aa15.68■□□□□ 0.1
U2AF1-203ENST00000398137 COX8AP10176 69 aa15.66■□□□□ 0.1
U2AF1-203ENST00000398137 LINC00308Q8TCZ7 52 aa15.66■□□□□ 0.1
U2AF1-203ENST00000398137 SPANXDQ9BXN6 97 aa15.65■□□□□ 0.1
U2AF1-203ENST00000398137 SPANXCQ9NY87 97 aa15.65■□□□□ 0.1
U2AF1-203ENST00000398137 TNXBP22105 4242 aa15.64■□□□□ 0.09
U2AF1-203ENST00000398137 C1orf137Q5JT78 98 aa15.64■□□□□ 0.09
U2AF1-203ENST00000398137 IGKV2-28A0A075B6P5 120 aa15.63■□□□□ 0.09
U2AF1-203ENST00000398137 M0R378 163 aa15.63■□□□□ 0.09
U2AF1-203ENST00000398137 IGKV2D-28P01615 120 aa15.63■□□□□ 0.09
U2AF1-203ENST00000398137 C14orf144Q96I85 54 aa15.62■□□□□ 0.09
U2AF1-203ENST00000398137 SPANXB1Q9NS25 103 aaPredicted RBP15.6■□□□□ 0.09
U2AF1-203ENST00000398137 NDUFC2O95298 119 aa15.59■□□□□ 0.09
U2AF1-203ENST00000398137 IGLV1-50A0A075B6I6 118 aa15.58■□□□□ 0.08
U2AF1-203ENST00000398137 DLEU1O43261 78 aa15.57■□□□□ 0.08
U2AF1-203ENST00000398137 Q6ZVH6 145 aa15.57■□□□□ 0.08
U2AF1-203ENST00000398137 TRBV10-2A0A0K0K1G8 114 aa15.55■□□□□ 0.08
U2AF1-203ENST00000398137 IFITM1P13164 125 aa15.55■□□□□ 0.08
U2AF1-203ENST00000398137 SLC25A34Q6PIV7 304 aa15.55■□□□□ 0.08
U2AF1-203ENST00000398137 IGLV7-43P04211 117 aa15.54■□□□□ 0.08
U2AF1-203ENST00000398137 SRSF9Q13242 221 aaKnown RBP eCLIP15.54■□□□□ 0.08
U2AF1-203ENST00000398137 MUSTN1Q8IVN3 82 aa15.54■□□□□ 0.08
U2AF1-203ENST00000398137 COPS9Q8WXC6 57 aa15.54■□□□□ 0.08
U2AF1-203ENST00000398137 TRBV10-3A0A0K0K1G6 114 aa15.53■□□□□ 0.08
U2AF1-203ENST00000398137 BCE1O60756 84 aa15.51■□□□□ 0.07
U2AF1-203ENST00000398137 TMEM126AQ9H061 195 aa15.51■□□□□ 0.07
U2AF1-203ENST00000398137 DDTP30046 118 aa15.5■□□□□ 0.07
U2AF1-203ENST00000398137 S100A12P80511 92 aa15.5■□□□□ 0.07
U2AF1-203ENST00000398137 REG3GQ6UW15 175 aa15.5■□□□□ 0.07
U2AF1-203ENST00000398137 PPDPFQ9H3Y8 114 aa15.5■□□□□ 0.07
U2AF1-203ENST00000398137 UBR4Q5T4S7 5183 aa15.49■□□□□ 0.07
U2AF1-203ENST00000398137 LOC105371267A0A1B0GV96 52 aa15.49■□□□□ 0.07
U2AF1-203ENST00000398137 S100A7L2Q5SY68 101 aa15.49■□□□□ 0.07
U2AF1-203ENST00000398137 PRYO14603 147 aa15.47■□□□□ 0.07
U2AF1-203ENST00000398137 C2orf91Q6ZV80 131 aa15.47■□□□□ 0.07
U2AF1-203ENST00000398137 HIST1H4GQ99525 98 aa15.47■□□□□ 0.07
U2AF1-203ENST00000398137 IGLV6-57P01721 117 aa15.46■□□□□ 0.07
U2AF1-203ENST00000398137 SPINK6Q6UWN8 80 aa15.46■□□□□ 0.07
U2AF1-203ENST00000398137 KCNQ1DNQ9H478 68 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms