RNA–Protein interactions for RNA: ENST00000397893.3

SUMO3-202, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-202ENST00000397893 SS18L2Q9UHA2 77 aa4.75□□□□□ -1.65
SUMO3-202ENST00000397893 CSDC2Q9Y534 153 aaKnown RBP4.75□□□□□ -1.65
SUMO3-202ENST00000397893 TRAV13-2A0A0B4J235 113 aa4.74□□□□□ -1.65
SUMO3-202ENST00000397893 TRAV13-1A0A0B4J241 112 aa4.74□□□□□ -1.65
SUMO3-202ENST00000397893 A0A0U1RRA0 63 aa4.74□□□□□ -1.65
SUMO3-202ENST00000397893 SMIM1B2RUZ4 78 aa4.74□□□□□ -1.65
SUMO3-202ENST00000397893 B5MCH6 92 aa4.74□□□□□ -1.65
SUMO3-202ENST00000397893 F5H768 121 aa4.74□□□□□ -1.65
SUMO3-202ENST00000397893 CRPP02741 224 aa4.74□□□□□ -1.65
SUMO3-202ENST00000397893 ATP5G1P05496 136 aa4.74□□□□□ -1.65
SUMO3-202ENST00000397893 LINC00242Q5T6M2 205 aa4.74□□□□□ -1.65
SUMO3-202ENST00000397893 C6orf223Q8N319 242 aa4.74□□□□□ -1.65
SUMO3-202ENST00000397893 ZNF625Q96I27 306 aaPredicted RBP4.74□□□□□ -1.65
SUMO3-202ENST00000397893 TMEM243Q9BU79 118 aa4.74□□□□□ -1.65
SUMO3-202ENST00000397893 KRTAP1-5Q9BYS1 174 aa4.74□□□□□ -1.65
SUMO3-202ENST00000397893 TRBV7-7A0A0K0K1E9 115 aa4.73□□□□□ -1.65
SUMO3-202ENST00000397893 CDK2AP2O75956 126 aa4.73□□□□□ -1.65
SUMO3-202ENST00000397893 INAFM2P0DMQ5 153 aa4.73□□□□□ -1.65
SUMO3-202ENST00000397893 LORP23490 312 aaPredicted RBP4.73□□□□□ -1.65
SUMO3-202ENST00000397893 COX6A2Q02221 97 aa4.73□□□□□ -1.65
SUMO3-202ENST00000397893 C16orf74Q96GX8 76 aa4.73□□□□□ -1.65
SUMO3-202ENST00000397893 IMUPQ9GZP8 106 aa4.73□□□□□ -1.65
SUMO3-202ENST00000397893 NOP10Q9NPE3 64 aaKnown RBP4.73□□□□□ -1.65
SUMO3-202ENST00000397893 Q9UF83 564 aa4.73□□□□□ -1.65
SUMO3-202ENST00000397893 C16orf90A8MZG2 172 aa4.72□□□□□ -1.65
SUMO3-202ENST00000397893 CCDC179H3BU77 68 aa4.72□□□□□ -1.65
SUMO3-202ENST00000397893 CCL18P55774 89 aa4.72□□□□□ -1.65
SUMO3-202ENST00000397893 LINC00643Q86TS7 51 aa4.72□□□□□ -1.65
SUMO3-202ENST00000397893 FAT1Q14517 4588 aa4.71□□□□□ -1.66
SUMO3-202ENST00000397893 DNAL4O96015 105 aa4.71□□□□□ -1.66
SUMO3-202ENST00000397893 BAALC-AS2P0C853 105 aa4.71□□□□□ -1.66
SUMO3-202ENST00000397893 LINC00694P0DN24 101 aa4.71□□□□□ -1.66
SUMO3-202ENST00000397893 ESRGQ1W209 222 aa4.71□□□□□ -1.66
SUMO3-202ENST00000397893 COX7B2Q8TF08 81 aa4.71□□□□□ -1.66
SUMO3-202ENST00000397893 UPK3BQ9BT76 320 aa4.71□□□□□ -1.66
SUMO3-202ENST00000397893 CDC42SE2Q9NRR3 84 aa4.71□□□□□ -1.66
SUMO3-202ENST00000397893 TRGV2A0A075B6R0 118 aa4.7□□□□□ -1.66
SUMO3-202ENST00000397893 TRGV4A0A0C4DH28 118 aa4.7□□□□□ -1.66
SUMO3-202ENST00000397893 H3BNG1 76 aa4.7□□□□□ -1.66
SUMO3-202ENST00000397893 KRTAP10-2P60368 255 aa4.7□□□□□ -1.66
SUMO3-202ENST00000397893 SOSTDC1Q6X4U4 206 aa4.7□□□□□ -1.66
SUMO3-202ENST00000397893 NTM-AS1Q6ZSK4 140 aa4.7□□□□□ -1.66
SUMO3-202ENST00000397893 Q6ZTI0 123 aa4.7□□□□□ -1.66
SUMO3-202ENST00000397893 DMBT1Q9UGM3 2413 aaPredicted RBP4.7□□□□□ -1.66
SUMO3-202ENST00000397893 HERC1Q15751 4861 aa4.69□□□□□ -1.66
SUMO3-202ENST00000397893 A0A096LPF7 62 aa4.69□□□□□ -1.66
SUMO3-202ENST00000397893 FAM236AA0A1B0GUQ0 79 aa4.69□□□□□ -1.66
SUMO3-202ENST00000397893 FAM236BA0A1B0GV22 79 aa4.69□□□□□ -1.66
SUMO3-202ENST00000397893 H0YGX0 51 aa4.69□□□□□ -1.66
SUMO3-202ENST00000397893 CXCL5P42830 114 aa4.69□□□□□ -1.66
SUMO3-202ENST00000397893 RPL28P46779 137 aaKnown RBP4.69□□□□□ -1.66
SUMO3-202ENST00000397893 LINC00158P58513 81 aa4.69□□□□□ -1.66
SUMO3-202ENST00000397893 Q6ZRN7 208 aaPredicted RBP4.69□□□□□ -1.66
SUMO3-202ENST00000397893 Q8N1X5 172 aa4.69□□□□□ -1.66
SUMO3-202ENST00000397893 TMEM126AQ9H061 195 aa4.69□□□□□ -1.66
SUMO3-202ENST00000397893 SND1-IT1Q9HBX3 110 aa4.69□□□□□ -1.66
SUMO3-202ENST00000397893 FAM30AQ9NZY2 134 aa4.69□□□□□ -1.66
SUMO3-202ENST00000397893 TOMM7Q9P0U1 55 aa4.69□□□□□ -1.66
SUMO3-202ENST00000397893 IGKV3OR2-268A0A0C4DH90 116 aa4.68□□□□□ -1.66
SUMO3-202ENST00000397893 TRBV6-4A0A1B0GX49 114 aa4.68□□□□□ -1.66
SUMO3-202ENST00000397893 GAGE2AQ6NT46 116 aa4.68□□□□□ -1.66
SUMO3-202ENST00000397893 MIR7-3HGQ8N6C7 128 aa4.68□□□□□ -1.66
SUMO3-202ENST00000397893 CHCHD5Q9BSY4 110 aa4.68□□□□□ -1.66
SUMO3-202ENST00000397893 SRRM2Q9UQ35 2752 aaKnown RBP4.67□□□□□ -1.66
SUMO3-202ENST00000397893 IBA57-AS1B1ANH7 110 aa4.67□□□□□ -1.66
SUMO3-202ENST00000397893 VPS13BQ7Z7G8 4022 aa4.67□□□□□ -1.66
SUMO3-202ENST00000397893 PAX4O43316 350 aa4.66□□□□□ -1.66
SUMO3-202ENST00000397893 C9orf153Q5TBE3 101 aa4.66□□□□□ -1.66
SUMO3-202ENST00000397893 SDIM1Q6ZPB5 146 aa4.66□□□□□ -1.66
SUMO3-202ENST00000397893 OR13C6PQ8NH95 151 aa4.66□□□□□ -1.66
SUMO3-202ENST00000397893 FAM218AQ96MZ4 157 aa4.66□□□□□ -1.66
SUMO3-202ENST00000397893 C1orf43Q9BWL3 253 aa4.66□□□□□ -1.66
SUMO3-202ENST00000397893 Q9HAA7 133 aa4.66□□□□□ -1.66
SUMO3-202ENST00000397893 FLG2Q5D862 2391 aaPredicted RBP4.66□□□□□ -1.66
SUMO3-202ENST00000397893 TRBV6-8A0A0A6YYG3 113 aa4.65□□□□□ -1.67
SUMO3-202ENST00000397893 LOC100131303A0A0U1RQF7 123 aa4.65□□□□□ -1.67
SUMO3-202ENST00000397893 GYPEP15421 78 aa4.65□□□□□ -1.67
SUMO3-202ENST00000397893 FHL2Q14192 279 aa4.65□□□□□ -1.67
SUMO3-202ENST00000397893 SS18Q15532 418 aa4.65□□□□□ -1.67
SUMO3-202ENST00000397893 C3orf22Q8N5N4 141 aa4.65□□□□□ -1.67
SUMO3-202ENST00000397893 LINC00337Q8N6G1 96 aa4.65□□□□□ -1.67
SUMO3-202ENST00000397893 SMIM11BQ8TCY0 68 aa4.65□□□□□ -1.67
SUMO3-202ENST00000397893 SMCR5Q8TEV8 140 aa4.65□□□□□ -1.67
SUMO3-202ENST00000397893 A0A087WZ39 114 aa4.64□□□□□ -1.67
SUMO3-202ENST00000397893 ATOX1O00244 68 aa4.64□□□□□ -1.67
SUMO3-202ENST00000397893 UQCRQO14949 82 aa4.64□□□□□ -1.67
SUMO3-202ENST00000397893 PFN2P35080 140 aa4.64□□□□□ -1.67
SUMO3-202ENST00000397893 C6orf226Q5I0X4 101 aa4.64□□□□□ -1.67
SUMO3-202ENST00000397893 Q6JHZ5 121 aa4.64□□□□□ -1.67
SUMO3-202ENST00000397893 LYPD5Q6UWN5 251 aa4.64□□□□□ -1.67
SUMO3-202ENST00000397893 ORMDL1Q9P0S3 153 aa4.64□□□□□ -1.67
SUMO3-202ENST00000397893 MYCBP2O75592 4640 aa4.63□□□□□ -1.67
SUMO3-202ENST00000397893 IGKV2-28A0A075B6P5 120 aa4.63□□□□□ -1.67
SUMO3-202ENST00000397893 A0A087WYN8 130 aa4.63□□□□□ -1.67
SUMO3-202ENST00000397893 IGHV3OR16-9A0A0B4J2B5 98 aa4.63□□□□□ -1.67
SUMO3-202ENST00000397893 LECT2O14960 151 aa4.63□□□□□ -1.67
SUMO3-202ENST00000397893 IGKV2D-28P01615 120 aa4.63□□□□□ -1.67
SUMO3-202ENST00000397893 FUSP35637 526 aaKnown RBP eCLIP4.63□□□□□ -1.67
SUMO3-202ENST00000397893 S100A7L2Q5SY68 101 aa4.63□□□□□ -1.67
SUMO3-202ENST00000397893 C5orf38Q86SI9 138 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms