RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 ZNF73O43830 326 aaPredicted RBP3.85□□□□□ -1.79
PTPRD-205ENST00000397611 NSD1Q96L73 2696 aaPredicted RBP3.84□□□□□ -1.79
PTPRD-205ENST00000397611 IGLV1-51P01701 117 aa3.84□□□□□ -1.79
PTPRD-205ENST00000397611 IGKV4-1P06312 121 aa3.84□□□□□ -1.79
PTPRD-205ENST00000397611 SETXQ7Z333 2677 aaKnown RBP3.84□□□□□ -1.79
PTPRD-205ENST00000397611 TEX15Q9BXT5 2789 aa3.84□□□□□ -1.79
PTPRD-205ENST00000397611 ESRGQ1W209 222 aa3.84□□□□□ -1.79
PTPRD-205ENST00000397611 C9orf116Q5BN46 136 aaPredicted RBP3.84□□□□□ -1.79
PTPRD-205ENST00000397611 PRO0255Q9UI72 69 aa3.84□□□□□ -1.79
PTPRD-205ENST00000397611 IGHV4-31P0DP07 118 aa3.84□□□□□ -1.8
PTPRD-205ENST00000397611 OBSCN-AS1Q96MR7 158 aa3.84□□□□□ -1.8
PTPRD-205ENST00000397611 IGKV2-28A0A075B6P5 120 aa3.84□□□□□ -1.8
PTPRD-205ENST00000397611 IGKV2D-28P01615 120 aa3.84□□□□□ -1.8
PTPRD-205ENST00000397611 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.83□□□□□ -1.8
PTPRD-205ENST00000397611 Q8N9L7 120 aa3.83□□□□□ -1.8
PTPRD-205ENST00000397611 LY6G6DO95868 133 aa3.83□□□□□ -1.8
PTPRD-205ENST00000397611 DEFB135Q30KP9 77 aa3.83□□□□□ -1.8
PTPRD-205ENST00000397611 ITPR2Q14571 2701 aa3.83□□□□□ -1.8
PTPRD-205ENST00000397611 ZZEF1O43149 2961 aa3.83□□□□□ -1.8
PTPRD-205ENST00000397611 C16orf95Q9H693 158 aa3.83□□□□□ -1.8
PTPRD-205ENST00000397611 DNAJC9-AS1A6NH13 148 aa3.83□□□□□ -1.8
PTPRD-205ENST00000397611 Q8IZM0 81 aa3.83□□□□□ -1.8
PTPRD-205ENST00000397611 A0A096LNI7 61 aa3.83□□□□□ -1.8
PTPRD-205ENST00000397611 HIGD2AQ9BW72 106 aa3.83□□□□□ -1.8
PTPRD-205ENST00000397611 XIRP2A4UGR9 3374 aa3.83□□□□□ -1.8
PTPRD-205ENST00000397611 TRAV10A0A0B4J240 114 aa3.82□□□□□ -1.8
PTPRD-205ENST00000397611 PLA2G2AP14555 144 aa3.82□□□□□ -1.8
PTPRD-205ENST00000397611 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.82□□□□□ -1.8
PTPRD-205ENST00000397611 COX17Q14061 63 aa3.82□□□□□ -1.8
PTPRD-205ENST00000397611 IGLV4-60A0A075B6I1 120 aa3.82□□□□□ -1.8
PTPRD-205ENST00000397611 SPART-AS1P0CW21 52 aa3.81□□□□□ -1.8
PTPRD-205ENST00000397611 CD164L2Q6UWJ8 174 aa3.81□□□□□ -1.8
PTPRD-205ENST00000397611 C18orf65Q6ZTR6 163 aa3.81□□□□□ -1.8
PTPRD-205ENST00000397611 BBC3Q96PG8 261 aaPredicted RBP3.81□□□□□ -1.8
PTPRD-205ENST00000397611 NF1P21359 2839 aa3.81□□□□□ -1.8
PTPRD-205ENST00000397611 LINC00336Q6ZUF6 198 aa3.81□□□□□ -1.8
PTPRD-205ENST00000397611 WFDC10AQ9H1F0 79 aa3.81□□□□□ -1.8
PTPRD-205ENST00000397611 LINC00208Q96KT6 92 aa3.81□□□□□ -1.8
PTPRD-205ENST00000397611 C19orf73Q9NVV2 129 aa3.81□□□□□ -1.8
PTPRD-205ENST00000397611 LINC00474Q9P2X8 69 aa3.81□□□□□ -1.8
PTPRD-205ENST00000397611 STAB1Q9NY15 2570 aa3.81□□□□□ -1.8
PTPRD-205ENST00000397611 M0R378 163 aa3.8□□□□□ -1.8
PTPRD-205ENST00000397611 Q9UF83 564 aa3.8□□□□□ -1.8
PTPRD-205ENST00000397611 MGAM2Q2M2H8 2515 aa3.8□□□□□ -1.8
PTPRD-205ENST00000397611 PLAC8L1A1L4L8 177 aa3.8□□□□□ -1.8
PTPRD-205ENST00000397611 APCP25054 2843 aa3.8□□□□□ -1.8
PTPRD-205ENST00000397611 UNQ6190/PRO20217Q6UXQ8 127 aa3.8□□□□□ -1.8
PTPRD-205ENST00000397611 LINC00575Q6W349 94 aa3.8□□□□□ -1.8
PTPRD-205ENST00000397611 RPL37AP8A6NKH3 93 aa3.79□□□□□ -1.8
PTPRD-205ENST00000397611 LINC00167Q96N53 147 aa3.79□□□□□ -1.8
PTPRD-205ENST00000397611 IGKV2-24A0A0C4DH68 120 aa3.79□□□□□ -1.8
PTPRD-205ENST00000397611 SMIM29Q86T20 159 aa3.79□□□□□ -1.8
PTPRD-205ENST00000397611 CYSRT1A8MQ03 144 aa3.79□□□□□ -1.8
PTPRD-205ENST00000397611 GIG44P09565 113 aaPredicted RBP3.79□□□□□ -1.8
PTPRD-205ENST00000397611 IGHV4-30-4P0DP06 118 aa3.79□□□□□ -1.8
PTPRD-205ENST00000397611 CXCL6P80162 114 aa3.79□□□□□ -1.8
PTPRD-205ENST00000397611 TM2D3Q9BRN9 247 aa3.79□□□□□ -1.8
PTPRD-205ENST00000397611 CSNK1G2-AS1Q8NCQ2 148 aa3.79□□□□□ -1.8
PTPRD-205ENST00000397611 NACAE9PAV3 2078 aa3.78□□□□□ -1.8
PTPRD-205ENST00000397611 A0A1B0GW54 56 aa3.78□□□□□ -1.8
PTPRD-205ENST00000397611 UTP20O75691 2785 aaKnown RBP3.78□□□□□ -1.8
PTPRD-205ENST00000397611 LYPD5Q6UWN5 251 aa3.78□□□□□ -1.8
PTPRD-205ENST00000397611 COL12A1Q99715 3063 aa3.78□□□□□ -1.8
PTPRD-205ENST00000397611 DEFB116Q30KQ4 102 aa3.78□□□□□ -1.8
PTPRD-205ENST00000397611 DHRS4-AS1Q9P1J3 65 aa3.78□□□□□ -1.8
PTPRD-205ENST00000397611 F8WDY8 70 aa3.78□□□□□ -1.8
PTPRD-205ENST00000397611 SPATA3Q8NHX4 192 aa3.78□□□□□ -1.8
PTPRD-205ENST00000397611 LINC01006Q8NI28 216 aa3.77□□□□□ -1.81
PTPRD-205ENST00000397611 GVQW2A0A096LPI5 108 aaPredicted RBP3.77□□□□□ -1.81
PTPRD-205ENST00000397611 PCOTHQ58A44 107 aa3.77□□□□□ -1.81
PTPRD-205ENST00000397611 C6orf223Q8N319 242 aa3.77□□□□□ -1.81
PTPRD-205ENST00000397611 NOTCH1P46531 2555 aa3.77□□□□□ -1.81
PTPRD-205ENST00000397611 STAB2Q8WWQ8 2551 aa3.77□□□□□ -1.81
PTPRD-205ENST00000397611 C1orf137Q5JT78 98 aa3.77□□□□□ -1.81
PTPRD-205ENST00000397611 DMXL1Q9Y485 3027 aa3.77□□□□□ -1.81
PTPRD-205ENST00000397611 CASC2Q6XLA1 102 aa3.77□□□□□ -1.81
PTPRD-205ENST00000397611 WIPF1O43516 503 aa3.77□□□□□ -1.81
PTPRD-205ENST00000397611 MAST4O15021 2626 aa3.76□□□□□ -1.81
PTPRD-205ENST00000397611 SYCNQ0VAF6 134 aa3.76□□□□□ -1.81
PTPRD-205ENST00000397611 C22orf24Q9Y442 160 aa3.76□□□□□ -1.81
PTPRD-205ENST00000397611 C10orf25Q5T742 122 aa3.76□□□□□ -1.81
PTPRD-205ENST00000397611 LINC00482Q8N8I6 264 aa3.76□□□□□ -1.81
PTPRD-205ENST00000397611 Q6ZQT0 140 aa3.76□□□□□ -1.81
PTPRD-205ENST00000397611 B9D2Q9BPU9 175 aa3.76□□□□□ -1.81
PTPRD-205ENST00000397611 KIAA0087Q14695 138 aa3.76□□□□□ -1.81
PTPRD-205ENST00000397611 C14orf177Q52M58 125 aa3.76□□□□□ -1.81
PTPRD-205ENST00000397611 HCG22E2RYF7 251 aa3.75□□□□□ -1.81
PTPRD-205ENST00000397611 H0Y9P7 68 aa3.75□□□□□ -1.81
PTPRD-205ENST00000397611 H3BNG1 76 aa3.75□□□□□ -1.81
PTPRD-205ENST00000397611 C2orf48Q96LS8 159 aa3.74□□□□□ -1.81
PTPRD-205ENST00000397611 F8P00451 2351 aa3.74□□□□□ -1.81
PTPRD-205ENST00000397611 LOC110117498A0A087WWA1 95 aa3.74□□□□□ -1.81
PTPRD-205ENST00000397611 PRR34Q9NV39 138 aa3.74□□□□□ -1.81
PTPRD-205ENST00000397611 LRBAP50851 2863 aa3.74□□□□□ -1.81
PTPRD-205ENST00000397611 KRTAP1-3Q8IUG1 177 aa3.74□□□□□ -1.81
PTPRD-205ENST00000397611 DNAH14Q0VDD8 3507 aa3.73□□□□□ -1.81
PTPRD-205ENST00000397611 LOC400499M0QZD8 3231 aa3.73□□□□□ -1.81
PTPRD-205ENST00000397611 INAFM1C9JVW0 142 aa3.73□□□□□ -1.81
PTPRD-205ENST00000397611 A8MUN3 132 aa3.73□□□□□ -1.81
PTPRD-205ENST00000397611 C9orf129Q5T035 196 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms