RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 PCLOQ9Y6V0 5065 aa18.27■□□□□ 0.52
CHCHD4-202ENST00000396914 C5orf52A6NGY3 159 aa18.25■□□□□ 0.51
CHCHD4-202ENST00000396914 AKR1D1P51857 326 aa18.25■□□□□ 0.51
CHCHD4-202ENST00000396914 LBHQ53QV2 105 aaPredicted RBP18.24■□□□□ 0.51
CHCHD4-202ENST00000396914 NKAPP1Q8N9T2 125 aa18.24■□□□□ 0.51
CHCHD4-202ENST00000396914 PLA2G2DQ9UNK4 145 aa18.23■□□□□ 0.51
CHCHD4-202ENST00000396914 MIR7-3HGQ8N6C7 128 aa18.23■□□□□ 0.51
CHCHD4-202ENST00000396914 PSORS1C2Q9UIG4 136 aa18.23■□□□□ 0.51
CHCHD4-202ENST00000396914 MRPL55Q7Z7F7 128 aaKnown RBP18.22■□□□□ 0.51
CHCHD4-202ENST00000396914 RPL24P83731 157 aaKnown RBP18.2■□□□□ 0.5
CHCHD4-202ENST00000396914 C1orf137Q5JT78 98 aa18.2■□□□□ 0.5
CHCHD4-202ENST00000396914 IGKV2D-26A0A0A0MRZ7 120 aa18.19■□□□□ 0.5
CHCHD4-202ENST00000396914 HNRNPA3P51991 378 aaKnown RBP18.19■□□□□ 0.5
CHCHD4-202ENST00000396914 TP73-AS1Q9UF72 201 aa18.19■□□□□ 0.5
CHCHD4-202ENST00000396914 GAGE10A6NGK3 116 aa18.18■□□□□ 0.5
CHCHD4-202ENST00000396914 KRTAP11-1Q8IUC1 163 aa18.17■□□□□ 0.5
CHCHD4-202ENST00000396914 ZNF815PA8K554 130 aa18.16■□□□□ 0.5
CHCHD4-202ENST00000396914 DAND5Q8N907 189 aa18.16■□□□□ 0.5
CHCHD4-202ENST00000396914 IGLV5-37A0A075B6J1 123 aa18.15■□□□□ 0.5
CHCHD4-202ENST00000396914 A0A0J9YXY3 114 aa18.15■□□□□ 0.5
CHCHD4-202ENST00000396914 RPL37AP8A6NKH3 93 aa18.15■□□□□ 0.5
CHCHD4-202ENST00000396914 SCGB1D1O95968 90 aa18.15■□□□□ 0.5
CHCHD4-202ENST00000396914 VPREB1P12018 145 aa18.15■□□□□ 0.5
CHCHD4-202ENST00000396914 ANKRD39Q53RE8 183 aa18.15■□□□□ 0.5
CHCHD4-202ENST00000396914 LINC00167Q96N53 147 aa18.15■□□□□ 0.5
CHCHD4-202ENST00000396914 BOD1L2Q8IYS8 172 aa18.14■□□□□ 0.49
CHCHD4-202ENST00000396914 TTTY13Q9BZ97 58 aa18.14■□□□□ 0.49
CHCHD4-202ENST00000396914 TMA7Q9Y2S6 64 aaKnown RBP18.14■□□□□ 0.49
CHCHD4-202ENST00000396914 HSBP1L1C9JCN9 74 aa18.11■□□□□ 0.49
CHCHD4-202ENST00000396914 Q8NDZ9 215 aa18.1■□□□□ 0.49
CHCHD4-202ENST00000396914 MIEN1Q9BRT3 115 aa18.1■□□□□ 0.49
CHCHD4-202ENST00000396914 FLG2Q5D862 2391 aaPredicted RBP18.07■□□□□ 0.48
CHCHD4-202ENST00000396914 IGKV2-28A0A075B6P5 120 aa18.06■□□□□ 0.48
CHCHD4-202ENST00000396914 IGKV2D-28P01615 120 aa18.06■□□□□ 0.48
CHCHD4-202ENST00000396914 NPC2P61916 151 aa18.06■□□□□ 0.48
CHCHD4-202ENST00000396914 SCGB1D4Q6XE38 83 aa18.06■□□□□ 0.48
CHCHD4-202ENST00000396914 IGLV7-43P04211 117 aa18.05■□□□□ 0.48
CHCHD4-202ENST00000396914 ADAMTSL4-AS1Q5T5F5 129 aa18.05■□□□□ 0.48
CHCHD4-202ENST00000396914 NCR3O14931 201 aa18.04■□□□□ 0.48
CHCHD4-202ENST00000396914 SPINK6Q6UWN8 80 aa18.04■□□□□ 0.48
CHCHD4-202ENST00000396914 PCP2Q8IVA1 136 aa18.02■□□□□ 0.48
CHCHD4-202ENST00000396914 M0R378 163 aa18.01■□□□□ 0.47
CHCHD4-202ENST00000396914 TIMM17BO60830 172 aa18■□□□□ 0.47
CHCHD4-202ENST00000396914 SRSF9Q13242 221 aaKnown RBP eCLIP18■□□□□ 0.47
CHCHD4-202ENST00000396914 IGLV1-50A0A075B6I6 118 aa17.98■□□□□ 0.47
CHCHD4-202ENST00000396914 PKHD1L1Q86WI1 4243 aa17.98■□□□□ 0.47
CHCHD4-202ENST00000396914 LOC107984156A0A0G2JMH3 177 aa17.98■□□□□ 0.47
CHCHD4-202ENST00000396914 ARL17AQ8IVW1 177 aa17.98■□□□□ 0.47
CHCHD4-202ENST00000396914 LITAFQ99732 161 aa17.98■□□□□ 0.47
CHCHD4-202ENST00000396914 BCE1O60756 84 aa17.96■□□□□ 0.47
CHCHD4-202ENST00000396914 MYCBP2O75592 4640 aa17.95■□□□□ 0.46
CHCHD4-202ENST00000396914 J3QL48 77 aa17.95■□□□□ 0.46
CHCHD4-202ENST00000396914 SOSTDC1Q6X4U4 206 aa17.95■□□□□ 0.46
CHCHD4-202ENST00000396914 TMEM238C9JI98 176 aa17.94■□□□□ 0.46
CHCHD4-202ENST00000396914 LINC00308Q8TCZ7 52 aa17.93■□□□□ 0.46
CHCHD4-202ENST00000396914 DIRC1Q969H9 104 aa17.93■□□□□ 0.46
CHCHD4-202ENST00000396914 REG3GQ6UW15 175 aa17.92■□□□□ 0.46
CHCHD4-202ENST00000396914 KRTAP29-1A8MX34 341 aaPredicted RBP17.91■□□□□ 0.46
CHCHD4-202ENST00000396914 EIF4EBP3O60516 100 aaPredicted RBP17.91■□□□□ 0.46
CHCHD4-202ENST00000396914 OXTP01178 125 aa17.91■□□□□ 0.46
CHCHD4-202ENST00000396914 UBE2AP49459 152 aa17.9■□□□□ 0.46
CHCHD4-202ENST00000396914 TMEM126AQ9H061 195 aa17.9■□□□□ 0.46
CHCHD4-202ENST00000396914 SPANXB1Q9NS25 103 aaPredicted RBP17.9■□□□□ 0.46
CHCHD4-202ENST00000396914 NDUFC2O95298 119 aa17.89■□□□□ 0.46
CHCHD4-202ENST00000396914 ZNF861PO60384 105 aa17.89■□□□□ 0.45
CHCHD4-202ENST00000396914 RPL28P46779 137 aaKnown RBP17.89■□□□□ 0.45
CHCHD4-202ENST00000396914 TRBV10-3A0A0K0K1G6 114 aa17.87■□□□□ 0.45
CHCHD4-202ENST00000396914 TRBV10-2A0A0K0K1G8 114 aa17.87■□□□□ 0.45
CHCHD4-202ENST00000396914 S100A12P80511 92 aa17.87■□□□□ 0.45
CHCHD4-202ENST00000396914 JOSD1Q15040 202 aaPredicted RBP17.87■□□□□ 0.45
CHCHD4-202ENST00000396914 S100A7L2Q5SY68 101 aa17.87■□□□□ 0.45
CHCHD4-202ENST00000396914 SPANXDQ9BXN6 97 aa17.87■□□□□ 0.45
CHCHD4-202ENST00000396914 SPANXCQ9NY87 97 aa17.87■□□□□ 0.45
CHCHD4-202ENST00000396914 H0Y9J4 135 aa17.86■□□□□ 0.45
CHCHD4-202ENST00000396914 FAM19A1Q7Z5A9 133 aa17.86■□□□□ 0.45
CHCHD4-202ENST00000396914 DDTP30046 118 aa17.85■□□□□ 0.45
CHCHD4-202ENST00000396914 COPS9Q8WXC6 57 aa17.83■□□□□ 0.45
CHCHD4-202ENST00000396914 VAMP8Q9BV40 100 aa17.83■□□□□ 0.45
CHCHD4-202ENST00000396914 PAM16Q9Y3D7 125 aa17.83■□□□□ 0.45
CHCHD4-202ENST00000396914 PRYO14603 147 aa17.82■□□□□ 0.44
CHCHD4-202ENST00000396914 LRP1Q07954 4544 aaKnown RBP17.81■□□□□ 0.44
CHCHD4-202ENST00000396914 PRLHP81277 87 aa17.81■□□□□ 0.44
CHCHD4-202ENST00000396914 SPATA45Q537H7 98 aa17.81■□□□□ 0.44
CHCHD4-202ENST00000396914 Q6ZVH6 145 aa17.81■□□□□ 0.44
CHCHD4-202ENST00000396914 IFITM1P13164 125 aa17.79■□□□□ 0.44
CHCHD4-202ENST00000396914 OR13C6PQ8NH95 151 aa17.79■□□□□ 0.44
CHCHD4-202ENST00000396914 KCNQ1DNQ9H478 68 aa17.79■□□□□ 0.44
CHCHD4-202ENST00000396914 COX8AP10176 69 aa17.77■□□□□ 0.44
CHCHD4-202ENST00000396914 MUSTN1Q8IVN3 82 aa17.77■□□□□ 0.44
CHCHD4-202ENST00000396914 FAT3Q8TDW7 4589 aa17.77■□□□□ 0.44
CHCHD4-202ENST00000396914 LINC01600Q96MT4 127 aa17.76■□□□□ 0.43
CHCHD4-202ENST00000396914 ETDCA0A1B0GVM5 59 aa17.75■□□□□ 0.43
CHCHD4-202ENST00000396914 C14orf144Q96I85 54 aa17.75■□□□□ 0.43
CHCHD4-202ENST00000396914 KRTAP13-1Q8IUC0 172 aa17.74■□□□□ 0.43
CHCHD4-202ENST00000396914 DMBT1Q9UGM3 2413 aaPredicted RBP17.74■□□□□ 0.43
CHCHD4-202ENST00000396914 IGLV6-57P01721 117 aa17.73■□□□□ 0.43
CHCHD4-202ENST00000396914 PYY3Q5JQD4 70 aa17.73■□□□□ 0.43
CHCHD4-202ENST00000396914 LINC00518Q8N0U6 118 aa17.72■□□□□ 0.43
CHCHD4-202ENST00000396914 TRAV23DV6A0A075B6W5 121 aa17.71■□□□□ 0.43
CHCHD4-202ENST00000396914 HIGD2AQ9BW72 106 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms