RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 GAGE2EQ4V326 116 aa11.21□□□□□ -0.61
NUP50-202ENST00000396096 SDIM1Q6ZPB5 146 aa11.21□□□□□ -0.61
NUP50-202ENST00000396096 ORMDL1Q9P0S3 153 aa11.21□□□□□ -0.61
NUP50-202ENST00000396096 GAGE2DQ9UEU5 116 aa11.21□□□□□ -0.61
NUP50-202ENST00000396096 MAST4O15021 2626 aa11.21□□□□□ -0.62
NUP50-202ENST00000396096 S100A7L2Q5SY68 101 aa11.2□□□□□ -0.62
NUP50-202ENST00000396096 Q8N814 137 aa11.2□□□□□ -0.62
NUP50-202ENST00000396096 IGLV6-57P01721 117 aa11.19□□□□□ -0.62
NUP50-202ENST00000396096 TTC32Q5I0X7 151 aa11.19□□□□□ -0.62
NUP50-202ENST00000396096 C2orf48Q96LS8 159 aa11.19□□□□□ -0.62
NUP50-202ENST00000396096 PKD1L1Q8TDX9 2849 aa11.19□□□□□ -0.62
NUP50-202ENST00000396096 ZNF561-AS1K7EIQ3 104 aa11.19□□□□□ -0.62
NUP50-202ENST00000396096 C15orf56Q8N910 161 aa11.19□□□□□ -0.62
NUP50-202ENST00000396096 TENM3Q9P273 2699 aa11.19□□□□□ -0.62
NUP50-202ENST00000396096 F8WDY8 70 aa11.17□□□□□ -0.62
NUP50-202ENST00000396096 SLPIP03973 132 aa11.17□□□□□ -0.62
NUP50-202ENST00000396096 C6orf99Q4VX62 202 aa11.17□□□□□ -0.62
NUP50-202ENST00000396096 C9orf129Q5T035 196 aaKnown RBP11.17□□□□□ -0.62
NUP50-202ENST00000396096 CAMK2N2Q96S95 79 aa11.17□□□□□ -0.62
NUP50-202ENST00000396096 ANK2Q01484 3957 aa11.17□□□□□ -0.62
NUP50-202ENST00000396096 TRBV7-7A0A0K0K1E9 115 aa11.17□□□□□ -0.62
NUP50-202ENST00000396096 TM2D3Q9BRN9 247 aa11.17□□□□□ -0.62
NUP50-202ENST00000396096 C1orf43Q9BWL3 253 aa11.17□□□□□ -0.62
NUP50-202ENST00000396096 TRAV10A0A0B4J240 114 aa11.16□□□□□ -0.62
NUP50-202ENST00000396096 DNAH10OSP0CZ25 163 aa11.16□□□□□ -0.62
NUP50-202ENST00000396096 HIGD2BQ4VC39 106 aa11.16□□□□□ -0.62
NUP50-202ENST00000396096 RPL18AQ02543 176 aaKnown RBP11.15□□□□□ -0.63
NUP50-202ENST00000396096 LINC00575Q6W349 94 aa11.15□□□□□ -0.63
NUP50-202ENST00000396096 LINC00643Q86TS7 51 aa11.15□□□□□ -0.63
NUP50-202ENST00000396096 SMCR5Q8TEV8 140 aa11.15□□□□□ -0.63
NUP50-202ENST00000396096 GAGE2AQ6NT46 116 aa11.14□□□□□ -0.63
NUP50-202ENST00000396096 TMEM256-PLSCR3K7ERE1 68 aa11.13□□□□□ -0.63
NUP50-202ENST00000396096 Q6ZRU5 148 aa11.13□□□□□ -0.63
NUP50-202ENST00000396096 C14orf132Q9NPU4 83 aa11.13□□□□□ -0.63
NUP50-202ENST00000396096 IMUPQ9GZP8 106 aa11.12□□□□□ -0.63
NUP50-202ENST00000396096 XAGE1AQ9HD64 81 aa11.12□□□□□ -0.63
NUP50-202ENST00000396096 K7EIL1 84 aa11.11□□□□□ -0.63
NUP50-202ENST00000396096 IGKV2D-24A0A075B6R9 120 aa11.1□□□□□ -0.63
NUP50-202ENST00000396096 NDUFC2-KCTD14E9PQ53 114 aa11.1□□□□□ -0.63
NUP50-202ENST00000396096 JMJD7-PLA2G4BH0Y9G9 81 aa11.1□□□□□ -0.63
NUP50-202ENST00000396096 VPREB1P12018 145 aa11.1□□□□□ -0.63
NUP50-202ENST00000396096 NDUFV3P56181 108 aaKnown RBP11.1□□□□□ -0.63
NUP50-202ENST00000396096 TRBV10-3A0A0K0K1G6 114 aa11.1□□□□□ -0.63
NUP50-202ENST00000396096 TRAV23DV6A0A075B6W5 121 aa11.09□□□□□ -0.63
NUP50-202ENST00000396096 hADV29S1A0JD25 119 aa11.09□□□□□ -0.63
NUP50-202ENST00000396096 ANAPC13Q9BS18 74 aa11.09□□□□□ -0.63
NUP50-202ENST00000396096 PRB2P02812 416 aaPredicted RBP11.08□□□□□ -0.64
NUP50-202ENST00000396096 LINC00588Q9Y4M8 146 aa11.08□□□□□ -0.64
NUP50-202ENST00000396096 TRBV7-6A0A0J9YX20 115 aa11.07□□□□□ -0.64
NUP50-202ENST00000396096 NHLRC4P0CG21 123 aaPredicted RBP11.07□□□□□ -0.64
NUP50-202ENST00000396096 DIRC1Q969H9 104 aa11.07□□□□□ -0.64
NUP50-202ENST00000396096 M0R378 163 aa11.06□□□□□ -0.64
NUP50-202ENST00000396096 CCKP06307 115 aa11.06□□□□□ -0.64
NUP50-202ENST00000396096 SYCNQ0VAF6 134 aa11.06□□□□□ -0.64
NUP50-202ENST00000396096 H3BQ85 93 aa11.05□□□□□ -0.64
NUP50-202ENST00000396096 ZNF73O43830 326 aaPredicted RBP11.04□□□□□ -0.64
NUP50-202ENST00000396096 NOTCH1P46531 2555 aa11.04□□□□□ -0.64
NUP50-202ENST00000396096 Q6ZRP5 223 aa11.03□□□□□ -0.64
NUP50-202ENST00000396096 COL6A5A8TX70 2615 aa11.03□□□□□ -0.64
NUP50-202ENST00000396096 ELOF1P60002 83 aaKnown RBP11.02□□□□□ -0.64
NUP50-202ENST00000396096 UPK3BQ9BT76 320 aa11.02□□□□□ -0.64
NUP50-202ENST00000396096 LINC00846Q9NV44 126 aa11.02□□□□□ -0.64
NUP50-202ENST00000396096 COX7BP24311 80 aa11.02□□□□□ -0.65
NUP50-202ENST00000396096 MRAPQ8TCY5 172 aa11.02□□□□□ -0.65
NUP50-202ENST00000396096 TLX1NBP0CAT3 122 aa11.01□□□□□ -0.65
NUP50-202ENST00000396096 Q6JHZ5 121 aa11□□□□□ -0.65
NUP50-202ENST00000396096 RMI2Q96E14 147 aa11□□□□□ -0.65
NUP50-202ENST00000396096 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.99□□□□□ -0.65
NUP50-202ENST00000396096 Q6ZQY7 126 aa10.99□□□□□ -0.65
NUP50-202ENST00000396096 HUWE1Q7Z6Z7 4374 aaKnown RBP10.98□□□□□ -0.65
NUP50-202ENST00000396096 NBEAL1Q6ZS30 2694 aa10.97□□□□□ -0.65
NUP50-202ENST00000396096 LOC110117498A0A087WWA1 95 aa10.97□□□□□ -0.65
NUP50-202ENST00000396096 PLA2G2DQ9UNK4 145 aa10.97□□□□□ -0.65
NUP50-202ENST00000396096 USP17L23D6RBM5 183 aa10.96□□□□□ -0.65
NUP50-202ENST00000396096 GHRHP01286 108 aa10.96□□□□□ -0.65
NUP50-202ENST00000396096 RBM3P98179 157 aaKnown RBP10.96□□□□□ -0.65
NUP50-202ENST00000396096 FAM236AA0A1B0GUQ0 79 aa10.95□□□□□ -0.66
NUP50-202ENST00000396096 FAM236BA0A1B0GV22 79 aa10.95□□□□□ -0.66
NUP50-202ENST00000396096 LINC00528Q8N1L1 170 aa10.95□□□□□ -0.66
NUP50-202ENST00000396096 Q6ZQT0 140 aa10.94□□□□□ -0.66
NUP50-202ENST00000396096 CASC10Q5T4H9 136 aa10.93□□□□□ -0.66
NUP50-202ENST00000396096 LAMTOR3Q9UHA4 124 aa10.93□□□□□ -0.66
NUP50-202ENST00000396096 KCNQ1DNQ9H478 68 aa10.93□□□□□ -0.66
NUP50-202ENST00000396096 IGLV5-37A0A075B6J1 123 aa10.91□□□□□ -0.66
NUP50-202ENST00000396096 PDE6GP18545 87 aa10.91□□□□□ -0.66
NUP50-202ENST00000396096 SERTAD4-AS1Q5TG53 156 aa10.91□□□□□ -0.66
NUP50-202ENST00000396096 NKAPP1Q8N9T2 125 aa10.91□□□□□ -0.66
NUP50-202ENST00000396096 DNAH1Q9P2D7 4330 aa10.91□□□□□ -0.66
NUP50-202ENST00000396096 C7orf33Q8WU49 177 aa10.91□□□□□ -0.66
NUP50-202ENST00000396096 HIST1H4AP62805 103 aaKnown RBP10.9□□□□□ -0.66
NUP50-202ENST00000396096 ATP5EP2Q5VTU8 51 aa10.89□□□□□ -0.67
NUP50-202ENST00000396096 IGKV3D-7A0A0C4DH55 119 aa10.89□□□□□ -0.67
NUP50-202ENST00000396096 DSCR8Q96T75 97 aa10.89□□□□□ -0.67
NUP50-202ENST00000396096 CCDC179H3BU77 68 aa10.88□□□□□ -0.67
NUP50-202ENST00000396096 TRBV7-4A0A0J9YYF1 115 aa10.86□□□□□ -0.67
NUP50-202ENST00000396096 UBL5Q9BZL1 73 aa10.86□□□□□ -0.67
NUP50-202ENST00000396096 MGAM2Q2M2H8 2515 aa10.84□□□□□ -0.67
NUP50-202ENST00000396096 LOC107984640A0A0U1RRK4 108 aa10.84□□□□□ -0.67
NUP50-202ENST00000396096 PRYO14603 147 aa10.84□□□□□ -0.67
NUP50-202ENST00000396096 APLNQ9ULZ1 77 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms