RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 CRPP02741 224 aa12.19□□□□□ -0.46
SREBF1-204ENST00000395756 SEC61GP60059 68 aa12.19□□□□□ -0.46
SREBF1-204ENST00000395756 DEFB121Q5J5C9 76 aa12.19□□□□□ -0.46
SREBF1-204ENST00000395756 WFDC10BQ8IUB3 73 aa12.19□□□□□ -0.46
SREBF1-204ENST00000395756 IBA57-AS1B1ANH7 110 aa12.19□□□□□ -0.46
SREBF1-204ENST00000395756 CRYGAP11844 174 aa12.18□□□□□ -0.46
SREBF1-204ENST00000395756 C2orf48Q96LS8 159 aa12.18□□□□□ -0.46
SREBF1-204ENST00000395756 LINC00336Q6ZUF6 198 aa12.17□□□□□ -0.46
SREBF1-204ENST00000395756 LST1O00453 97 aa12.17□□□□□ -0.46
SREBF1-204ENST00000395756 Q8IZM0 81 aa12.16□□□□□ -0.46
SREBF1-204ENST00000395756 EGFEM1PQ0D2K5 195 aa12.16□□□□□ -0.46
SREBF1-204ENST00000395756 IMUPQ9GZP8 106 aa12.16□□□□□ -0.46
SREBF1-204ENST00000395756 FAM240AA0A1B0GVK7 77 aa12.15□□□□□ -0.46
SREBF1-204ENST00000395756 ENHOQ6UWT2 76 aa12.15□□□□□ -0.46
SREBF1-204ENST00000395756 C10orf25Q5T742 122 aa12.15□□□□□ -0.46
SREBF1-204ENST00000395756 FAM218AQ96MZ4 157 aa12.15□□□□□ -0.46
SREBF1-204ENST00000395756 Q9HAA7 133 aa12.15□□□□□ -0.46
SREBF1-204ENST00000395756 KIAA0087Q14695 138 aa12.14□□□□□ -0.47
SREBF1-204ENST00000395756 UNQ6190/PRO20217Q6UXQ8 127 aa12.14□□□□□ -0.47
SREBF1-204ENST00000395756 TRAV13-2A0A0B4J235 113 aa12.13□□□□□ -0.47
SREBF1-204ENST00000395756 C11orf45Q8TAV5 145 aa12.13□□□□□ -0.47
SREBF1-204ENST00000395756 DEFB131BA0A096LNP1 70 aa12.13□□□□□ -0.47
SREBF1-204ENST00000395756 SMIM11BQ8TCY0 68 aa12.13□□□□□ -0.47
SREBF1-204ENST00000395756 PRO0628Q9UI54 55 aa12.13□□□□□ -0.47
SREBF1-204ENST00000395756 SPAG11BQ08648 103 aa12.12□□□□□ -0.47
SREBF1-204ENST00000395756 ESRGQ1W209 222 aa12.12□□□□□ -0.47
SREBF1-204ENST00000395756 LINC00643Q86TS7 51 aa12.12□□□□□ -0.47
SREBF1-204ENST00000395756 TMEM258P61165 79 aa12.11□□□□□ -0.47
SREBF1-204ENST00000395756 H3BT86 120 aa12.11□□□□□ -0.47
SREBF1-204ENST00000395756 A0A0U1RQV1 116 aa12.1□□□□□ -0.47
SREBF1-204ENST00000395756 HIGD2BQ4VC39 106 aa12.1□□□□□ -0.47
SREBF1-204ENST00000395756 FAM236DA0A1B0GTK5 79 aa12.08□□□□□ -0.47
SREBF1-204ENST00000395756 FAM236CP0DP71 79 aa12.08□□□□□ -0.47
SREBF1-204ENST00000395756 ATOX1O00244 68 aa12.07□□□□□ -0.48
SREBF1-204ENST00000395756 SDIM1Q6ZPB5 146 aa12.07□□□□□ -0.48
SREBF1-204ENST00000395756 NCR3O14931 201 aa12.07□□□□□ -0.48
SREBF1-204ENST00000395756 A0A087WYN8 130 aa12.06□□□□□ -0.48
SREBF1-204ENST00000395756 PRR34Q9NV39 138 aa12.06□□□□□ -0.48
SREBF1-204ENST00000395756 BAALC-AS2P0C853 105 aa12.05□□□□□ -0.48
SREBF1-204ENST00000395756 RPL28P46779 137 aaKnown RBP12.05□□□□□ -0.48
SREBF1-204ENST00000395756 Q8NDZ9 215 aa12.05□□□□□ -0.48
SREBF1-204ENST00000395756 V9GYY9 64 aa12.05□□□□□ -0.48
SREBF1-204ENST00000395756 SLPIP03973 132 aa12.04□□□□□ -0.48
SREBF1-204ENST00000395756 XAGE1AQ9HD64 81 aa12.04□□□□□ -0.48
SREBF1-204ENST00000395756 IGKV3D-7A0A0C4DH55 119 aa12.04□□□□□ -0.48
SREBF1-204ENST00000395756 A0A087WVE0 104 aa12.03□□□□□ -0.48
SREBF1-204ENST00000395756 ACYP1P07311 99 aa12.03□□□□□ -0.48
SREBF1-204ENST00000395756 LINC01600Q96MT4 127 aa12.03□□□□□ -0.48
SREBF1-204ENST00000395756 IGKV2D-24A0A075B6R9 120 aa12.02□□□□□ -0.49
SREBF1-204ENST00000395756 LECT2O14960 151 aa12.02□□□□□ -0.49
SREBF1-204ENST00000395756 CXCL5P42830 114 aa12.02□□□□□ -0.49
SREBF1-204ENST00000395756 LINC01561Q8N1V8 128 aa12.01□□□□□ -0.49
SREBF1-204ENST00000395756 STAB2Q8WWQ8 2551 aa12.01□□□□□ -0.49
SREBF1-204ENST00000395756 DNAL4O96015 105 aa12.01□□□□□ -0.49
SREBF1-204ENST00000395756 K7EIL1 84 aa12□□□□□ -0.49
SREBF1-204ENST00000395756 ZNF561-AS1K7EIQ3 104 aa12□□□□□ -0.49
SREBF1-204ENST00000395756 RPL18AQ02543 176 aaKnown RBP12□□□□□ -0.49
SREBF1-204ENST00000395756 SERP2Q8N6R1 65 aa11.99□□□□□ -0.49
SREBF1-204ENST00000395756 S100A7L2Q5SY68 101 aa11.98□□□□□ -0.49
SREBF1-204ENST00000395756 UPK3BQ9BT76 320 aa11.98□□□□□ -0.49
SREBF1-204ENST00000395756 C6orf48Q9UBA6 75 aa11.97□□□□□ -0.49
SREBF1-204ENST00000395756 COX17Q14061 63 aa11.97□□□□□ -0.49
SREBF1-204ENST00000395756 CAMK2N2Q96S95 79 aa11.97□□□□□ -0.49
SREBF1-204ENST00000395756 DNAH3Q8TD57 4116 aa11.97□□□□□ -0.49
SREBF1-204ENST00000395756 H3BNG1 76 aa11.97□□□□□ -0.49
SREBF1-204ENST00000395756 C1orf195Q5TG92 126 aa11.95□□□□□ -0.5
SREBF1-204ENST00000395756 C9orf129Q5T035 196 aaKnown RBP11.95□□□□□ -0.5
SREBF1-204ENST00000395756 BRK1Q8WUW1 75 aa11.95□□□□□ -0.5
SREBF1-204ENST00000395756 HIST1H4AP62805 103 aaKnown RBP11.94□□□□□ -0.5
SREBF1-204ENST00000395756 HUWE1Q7Z6Z7 4374 aaKnown RBP11.93□□□□□ -0.5
SREBF1-204ENST00000395756 C6orf99Q4VX62 202 aa11.93□□□□□ -0.5
SREBF1-204ENST00000395756 MDFIQ99750 246 aa11.93□□□□□ -0.5
SREBF1-204ENST00000395756 H0YGX0 51 aa11.92□□□□□ -0.5
SREBF1-204ENST00000395756 C22orf24Q9Y442 160 aa11.92□□□□□ -0.5
SREBF1-204ENST00000395756 Q6ZRU5 148 aa11.92□□□□□ -0.5
SREBF1-204ENST00000395756 TENM2Q9NT68 2774 aa11.91□□□□□ -0.5
SREBF1-204ENST00000395756 COL7A1Q02388 2944 aa11.91□□□□□ -0.5
SREBF1-204ENST00000395756 USP17L23D6RBM5 183 aa11.91□□□□□ -0.5
SREBF1-204ENST00000395756 LYSTQ99698 3801 aa11.91□□□□□ -0.5
SREBF1-204ENST00000395756 KRTAP26-1Q6PEX3 210 aa11.9□□□□□ -0.5
SREBF1-204ENST00000395756 C15orf56Q8N910 161 aa11.9□□□□□ -0.5
SREBF1-204ENST00000395756 LINC00588Q9Y4M8 146 aa11.9□□□□□ -0.5
SREBF1-204ENST00000395756 TRAV10A0A0B4J240 114 aa11.89□□□□□ -0.51
SREBF1-204ENST00000395756 LINC01556Q5JQF7 62 aa11.89□□□□□ -0.51
SREBF1-204ENST00000395756 TM2D3Q9BRN9 247 aa11.89□□□□□ -0.51
SREBF1-204ENST00000395756 NDUFC2O95298 119 aa11.88□□□□□ -0.51
SREBF1-204ENST00000395756 C14orf132Q9NPU4 83 aa11.88□□□□□ -0.51
SREBF1-204ENST00000395756 C20orf197Q8N268 126 aa11.87□□□□□ -0.51
SREBF1-204ENST00000395756 CASC10Q5T4H9 136 aa11.86□□□□□ -0.51
SREBF1-204ENST00000395756 TRBV10-3A0A0K0K1G6 114 aa11.85□□□□□ -0.51
SREBF1-204ENST00000395756 Q8N814 137 aa11.83□□□□□ -0.52
SREBF1-204ENST00000395756 ORMDL1Q9P0S3 153 aa11.83□□□□□ -0.52
SREBF1-204ENST00000395756 CSMD3Q7Z407 3707 aa11.83□□□□□ -0.52
SREBF1-204ENST00000395756 LINC00474Q9P2X8 69 aa11.81□□□□□ -0.52
SREBF1-204ENST00000395756 TRAV23DV6A0A075B6W5 121 aa11.81□□□□□ -0.52
SREBF1-204ENST00000395756 Q6ZRP5 223 aa11.81□□□□□ -0.52
SREBF1-204ENST00000395756 GHRHP01286 108 aa11.81□□□□□ -0.52
SREBF1-204ENST00000395756 GVQW2A0A096LPI5 108 aaPredicted RBP11.8□□□□□ -0.52
SREBF1-204ENST00000395756 DNAH10OSP0CZ25 163 aa11.8□□□□□ -0.52
SREBF1-204ENST00000395756 SYCNQ0VAF6 134 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms