RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 NDUFC2O95298 119 aa10.01□□□□□ -0.81
SCAF11-204ENST00000395454 C10orf25Q5T742 122 aa10.01□□□□□ -0.81
SCAF11-204ENST00000395454 UNQ6190/PRO20217Q6UXQ8 127 aa10□□□□□ -0.81
SCAF11-204ENST00000395454 C6orf223Q8N319 242 aa10□□□□□ -0.81
SCAF11-204ENST00000395454 C1orf43Q9BWL3 253 aa10□□□□□ -0.81
SCAF11-204ENST00000395454 RPL28P46779 137 aaKnown RBP9.99□□□□□ -0.81
SCAF11-204ENST00000395454 C15orf56Q8N910 161 aa9.99□□□□□ -0.81
SCAF11-204ENST00000395454 Q9HAA7 133 aa9.99□□□□□ -0.81
SCAF11-204ENST00000395454 RYR2Q92736 4967 aa9.99□□□□□ -0.81
SCAF11-204ENST00000395454 F8WDY8 70 aa9.99□□□□□ -0.81
SCAF11-204ENST00000395454 K7ERU9 68 aa9.99□□□□□ -0.81
SCAF11-204ENST00000395454 LST1O00453 97 aa9.99□□□□□ -0.81
SCAF11-204ENST00000395454 Q6ZR54 194 aa9.98□□□□□ -0.81
SCAF11-204ENST00000395454 C2orf48Q96LS8 159 aa9.98□□□□□ -0.81
SCAF11-204ENST00000395454 LINC01620Q4KN68 170 aa9.97□□□□□ -0.81
SCAF11-204ENST00000395454 C9orf116Q5BN46 136 aaPredicted RBP9.97□□□□□ -0.81
SCAF11-204ENST00000395454 MTURNQ8N3F0 131 aa9.97□□□□□ -0.81
SCAF11-204ENST00000395454 C6orf48Q9UBA6 75 aa9.97□□□□□ -0.81
SCAF11-204ENST00000395454 ETDBQ3ZM63 59 aa9.96□□□□□ -0.81
SCAF11-204ENST00000395454 RYR3Q15413 4870 aa9.96□□□□□ -0.82
SCAF11-204ENST00000395454 LINC00526Q96FQ7 95 aa9.95□□□□□ -0.82
SCAF11-204ENST00000395454 FRAS1Q86XX4 4008 aa9.95□□□□□ -0.82
SCAF11-204ENST00000395454 SLC25A20O43772 301 aa9.95□□□□□ -0.82
SCAF11-204ENST00000395454 IGKV2D-24A0A075B6R9 120 aa9.94□□□□□ -0.82
SCAF11-204ENST00000395454 C9JAW5 83 aa9.94□□□□□ -0.82
SCAF11-204ENST00000395454 CLEC2BQ92478 149 aa9.94□□□□□ -0.82
SCAF11-204ENST00000395454 TRBV10-2A0A0K0K1G8 114 aa9.94□□□□□ -0.82
SCAF11-204ENST00000395454 ZNF561-AS1K7EIQ3 104 aa9.94□□□□□ -0.82
SCAF11-204ENST00000395454 TEN1Q86WV5 123 aa9.94□□□□□ -0.82
SCAF11-204ENST00000395454 C1orf134Q5TEV5 83 aa9.93□□□□□ -0.82
SCAF11-204ENST00000395454 SMIM11BQ8TCY0 68 aa9.93□□□□□ -0.82
SCAF11-204ENST00000395454 H3BT86 120 aa9.92□□□□□ -0.82
SCAF11-204ENST00000395454 TRACP01848 142 aa9.92□□□□□ -0.82
SCAF11-204ENST00000395454 HIGD2BQ4VC39 106 aa9.92□□□□□ -0.82
SCAF11-204ENST00000395454 ANKRD29Q8N6D5 301 aa9.92□□□□□ -0.82
SCAF11-204ENST00000395454 Q8NDZ9 215 aa9.92□□□□□ -0.82
SCAF11-204ENST00000395454 CAMK2N2Q96S95 79 aa9.92□□□□□ -0.82
SCAF11-204ENST00000395454 RMI2Q96E14 147 aa9.91□□□□□ -0.82
SCAF11-204ENST00000395454 CARD19Q96LW7 228 aa9.91□□□□□ -0.82
SCAF11-204ENST00000395454 PSCAO43653 123 aa9.9□□□□□ -0.82
SCAF11-204ENST00000395454 Q6ZRU5 148 aa9.9□□□□□ -0.82
SCAF11-204ENST00000395454 H0YGX0 51 aa9.88□□□□□ -0.83
SCAF11-204ENST00000395454 FAM218AQ96MZ4 157 aa9.88□□□□□ -0.83
SCAF11-204ENST00000395454 TMEM126AQ9H061 195 aa9.88□□□□□ -0.83
SCAF11-204ENST00000395454 NDUFC2-KCTD14E9PQ53 114 aa9.88□□□□□ -0.83
SCAF11-204ENST00000395454 Q6ZRN7 208 aaPredicted RBP9.88□□□□□ -0.83
SCAF11-204ENST00000395454 DNAH17Q9UFH2 4485 aa9.87□□□□□ -0.83
SCAF11-204ENST00000395454 J3QR89 54 aa9.87□□□□□ -0.83
SCAF11-204ENST00000395454 RNF151Q2KHN1 245 aa9.87□□□□□ -0.83
SCAF11-204ENST00000395454 PPDPFLQ8WWR9 84 aa9.87□□□□□ -0.83
SCAF11-204ENST00000395454 PRR3P79522 188 aaKnown RBP9.86□□□□□ -0.83
SCAF11-204ENST00000395454 SYCNQ0VAF6 134 aa9.86□□□□□ -0.83
SCAF11-204ENST00000395454 OR13C6PQ8NH95 151 aa9.86□□□□□ -0.83
SCAF11-204ENST00000395454 FAT2Q9NYQ8 4349 aa9.85□□□□□ -0.83
SCAF11-204ENST00000395454 RTL8CO15255 209 aa9.85□□□□□ -0.83
SCAF11-204ENST00000395454 IGLV6-57P01721 117 aa9.85□□□□□ -0.83
SCAF11-204ENST00000395454 TLX1NBP0CAT3 122 aa9.84□□□□□ -0.83
SCAF11-204ENST00000395454 USP17L23D6RBM5 183 aa9.84□□□□□ -0.83
SCAF11-204ENST00000395454 LECT2O14960 151 aa9.83□□□□□ -0.84
SCAF11-204ENST00000395454 NCR3O14931 201 aa9.82□□□□□ -0.84
SCAF11-204ENST00000395454 A0A1B0GX51 115 aa9.82□□□□□ -0.84
SCAF11-204ENST00000395454 VPREB1P12018 145 aa9.82□□□□□ -0.84
SCAF11-204ENST00000395454 XAGE1AQ9HD64 81 aa9.82□□□□□ -0.84
SCAF11-204ENST00000395454 SLPIP03973 132 aa9.81□□□□□ -0.84
SCAF11-204ENST00000395454 A0A087WYN8 130 aa9.8□□□□□ -0.84
SCAF11-204ENST00000395454 TNP2Q05952 138 aa9.8□□□□□ -0.84
SCAF11-204ENST00000395454 Q6ZRP5 223 aa9.8□□□□□ -0.84
SCAF11-204ENST00000395454 LINC00167Q96N53 147 aa9.8□□□□□ -0.84
SCAF11-204ENST00000395454 S100A7L2Q5SY68 101 aa9.79□□□□□ -0.84
SCAF11-204ENST00000395454 C22orf24Q9Y442 160 aa9.79□□□□□ -0.84
SCAF11-204ENST00000395454 LRCOL1A6NCL2 159 aa9.78□□□□□ -0.84
SCAF11-204ENST00000395454 RPL18AQ02543 176 aaKnown RBP9.78□□□□□ -0.84
SCAF11-204ENST00000395454 VPS25Q9BRG1 176 aa9.78□□□□□ -0.84
SCAF11-204ENST00000395454 A0A087WTM6 91 aa9.77□□□□□ -0.85
SCAF11-204ENST00000395454 C9orf129Q5T035 196 aaKnown RBP9.77□□□□□ -0.85
SCAF11-204ENST00000395454 LINC00336Q6ZUF6 198 aa9.77□□□□□ -0.85
SCAF11-204ENST00000395454 PLA2G2DQ9UNK4 145 aa9.77□□□□□ -0.85
SCAF11-204ENST00000395454 HECTD4Q9Y4D8 3996 aa9.77□□□□□ -0.85
SCAF11-204ENST00000395454 TEX49A0A1B0GTD5 131 aa9.76□□□□□ -0.85
SCAF11-204ENST00000395454 C6orf99Q4VX62 202 aa9.76□□□□□ -0.85
SCAF11-204ENST00000395454 TRBV10-3A0A0K0K1G6 114 aa9.76□□□□□ -0.85
SCAF11-204ENST00000395454 M0R378 163 aa9.76□□□□□ -0.85
SCAF11-204ENST00000395454 BAALC-AS2P0C853 105 aa9.76□□□□□ -0.85
SCAF11-204ENST00000395454 DNAH11Q96DT5 4516 aa9.75□□□□□ -0.85
SCAF11-204ENST00000395454 PKD1P98161 4303 aa9.75□□□□□ -0.85
SCAF11-204ENST00000395454 DNAL4O96015 105 aa9.75□□□□□ -0.85
SCAF11-204ENST00000395454 CBY1Q9Y3M2 126 aa9.75□□□□□ -0.85
SCAF11-204ENST00000395454 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.74□□□□□ -0.85
SCAF11-204ENST00000395454 TRBV7-6A0A0J9YX20 115 aa9.74□□□□□ -0.85
SCAF11-204ENST00000395454 CNBPP62633 177 aaKnown RBP9.74□□□□□ -0.85
SCAF11-204ENST00000395454 GAGE2EQ4V326 116 aa9.74□□□□□ -0.85
SCAF11-204ENST00000395454 Q8N814 137 aa9.74□□□□□ -0.85
SCAF11-204ENST00000395454 GAGE2DQ9UEU5 116 aa9.74□□□□□ -0.85
SCAF11-204ENST00000395454 IGLV5-37A0A075B6J1 123 aa9.73□□□□□ -0.85
SCAF11-204ENST00000395454 TRAV23DV6A0A075B6W5 121 aa9.73□□□□□ -0.85
SCAF11-204ENST00000395454 C14orf177Q52M58 125 aa9.73□□□□□ -0.85
SCAF11-204ENST00000395454 PKHD1P08F94 4074 aa9.73□□□□□ -0.85
SCAF11-204ENST00000395454 LINC00575Q6W349 94 aa9.72□□□□□ -0.85
SCAF11-204ENST00000395454 OBSCN-AS1Q96MR7 158 aa9.7□□□□□ -0.86
SCAF11-204ENST00000395454 CDIP1Q9H305 208 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 266.2 ms