RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 LINC00483Q53H64 154 aa2.75□□□□□ -1.97
HERC4-204ENST00000395198 CASC2Q6XLA1 102 aa2.75□□□□□ -1.97
HERC4-204ENST00000395198 IGHV3-33P01772 117 aa2.75□□□□□ -1.97
HERC4-204ENST00000395198 Q8N1X5 172 aa2.75□□□□□ -1.97
HERC4-204ENST00000395198 Q8N9P0 234 aaPredicted RBP2.75□□□□□ -1.97
HERC4-204ENST00000395198 C22orf24Q9Y442 160 aa2.75□□□□□ -1.97
HERC4-204ENST00000395198 IGLV1-50A0A075B6I6 118 aa2.74□□□□□ -1.97
HERC4-204ENST00000395198 TRBV6-8A0A0A6YYG3 113 aa2.74□□□□□ -1.97
HERC4-204ENST00000395198 TRAV12-3A0A0B4J271 114 aa2.74□□□□□ -1.97
HERC4-204ENST00000395198 TRAV21A0A0B4J279 112 aa2.74□□□□□ -1.97
HERC4-204ENST00000395198 TRBV30A0A0K0K1B3 111 aa2.74□□□□□ -1.97
HERC4-204ENST00000395198 K7ERS5 55 aa2.74□□□□□ -1.97
HERC4-204ENST00000395198 IGFL4Q6B9Z1 124 aa2.74□□□□□ -1.97
HERC4-204ENST00000395198 SMR3AQ99954 134 aa2.74□□□□□ -1.97
HERC4-204ENST00000395198 COL5A1P20908 1838 aaPredicted RBP2.74□□□□□ -1.97
HERC4-204ENST00000395198 NDUFAF8A1L188 74 aa2.74□□□□□ -1.97
HERC4-204ENST00000395198 ZNF833PQ6ZTB9 187 aa2.74□□□□□ -1.97
HERC4-204ENST00000395198 COL27A1Q8IZC6 1860 aaPredicted RBP2.74□□□□□ -1.97
HERC4-204ENST00000395198 FREM2Q5SZK8 3169 aa2.74□□□□□ -1.97
HERC4-204ENST00000395198 INSP01308 110 aa2.74□□□□□ -1.97
HERC4-204ENST00000395198 GIG44P09565 113 aaPredicted RBP2.74□□□□□ -1.97
HERC4-204ENST00000395198 NDUFA4L2Q9NRX3 87 aa2.74□□□□□ -1.97
HERC4-204ENST00000395198 Q1RN00 199 aa2.73□□□□□ -1.97
HERC4-204ENST00000395198 TMEM263Q8WUH6 116 aaKnown RBP2.73□□□□□ -1.97
HERC4-204ENST00000395198 IGKV2-40A0A087WW87 121 aaPredicted RBP2.73□□□□□ -1.97
HERC4-204ENST00000395198 M0R3E3 92 aa2.73□□□□□ -1.97
HERC4-204ENST00000395198 IGKV2D-40P01614 121 aaPredicted RBP2.73□□□□□ -1.97
HERC4-204ENST00000395198 SPINK13Q1W4C9 94 aa2.73□□□□□ -1.97
HERC4-204ENST00000395198 ICOSQ9Y6W8 199 aa2.73□□□□□ -1.97
HERC4-204ENST00000395198 PANO1I0J062 215 aa2.73□□□□□ -1.97
HERC4-204ENST00000395198 SMIM29Q86T20 159 aa2.73□□□□□ -1.97
HERC4-204ENST00000395198 MIR7-3HGQ8N6C7 128 aa2.73□□□□□ -1.97
HERC4-204ENST00000395198 LINC00846Q9NV44 126 aa2.73□□□□□ -1.97
HERC4-204ENST00000395198 TOMM7Q9P0U1 55 aa2.73□□□□□ -1.97
HERC4-204ENST00000395198 CSMD3Q7Z407 3707 aa2.72□□□□□ -1.97
HERC4-204ENST00000395198 NDUFA4O00483 81 aa2.72□□□□□ -1.97
HERC4-204ENST00000395198 IGLV3-1P01715 115 aa2.72□□□□□ -1.97
HERC4-204ENST00000395198 WT1-ASQ06250 92 aa2.72□□□□□ -1.97
HERC4-204ENST00000395198 TMEM254Q8TBM7 123 aa2.72□□□□□ -1.97
HERC4-204ENST00000395198 SCO2A0A1W2PP80 73 aa2.72□□□□□ -1.97
HERC4-204ENST00000395198 ATP5EP2Q5VTU8 51 aa2.72□□□□□ -1.97
HERC4-204ENST00000395198 CAMK2N1Q7Z7J9 78 aa2.72□□□□□ -1.97
HERC4-204ENST00000395198 LINC00467Q9BRT7 94 aa2.72□□□□□ -1.97
HERC4-204ENST00000395198 KRTAP26-1Q6PEX3 210 aa2.72□□□□□ -1.97
HERC4-204ENST00000395198 LYPD1Q8N2G4 141 aa2.72□□□□□ -1.97
HERC4-204ENST00000395198 RPP21Q9H633 154 aaKnown RBP2.72□□□□□ -1.97
HERC4-204ENST00000395198 DCHS1Q96JQ0 3298 aa2.71□□□□□ -1.97
HERC4-204ENST00000395198 A0A1B0GUT8 65 aa2.71□□□□□ -1.97
HERC4-204ENST00000395198 C11orf86A6NJI1 115 aa2.71□□□□□ -1.97
HERC4-204ENST00000395198 PRR15LQ9BU68 103 aa2.71□□□□□ -1.97
HERC4-204ENST00000395198 H3BUA1 57 aa2.71□□□□□ -1.98
HERC4-204ENST00000395198 IGHV3-30P01768 117 aa2.71□□□□□ -1.98
HERC4-204ENST00000395198 IGHV3-30-5P0DP03 117 aa2.71□□□□□ -1.98
HERC4-204ENST00000395198 PRR34Q9NV39 138 aa2.71□□□□□ -1.98
HERC4-204ENST00000395198 ITPR3Q14573 2671 aa2.71□□□□□ -1.98
HERC4-204ENST00000395198 WDFY4Q6ZS81 3184 aa2.71□□□□□ -1.98
HERC4-204ENST00000395198 C5orf56Q8N8D9 126 aa2.71□□□□□ -1.98
HERC4-204ENST00000395198 CHD7Q9P2D1 2997 aa2.71□□□□□ -1.98
HERC4-204ENST00000395198 FRYLO94915 3013 aa2.71□□□□□ -1.98
HERC4-204ENST00000395198 TRAV10A0A0B4J240 114 aa2.71□□□□□ -1.98
HERC4-204ENST00000395198 D6R8Y8 96 aa2.71□□□□□ -1.98
HERC4-204ENST00000395198 PPP1R17O96001 155 aa2.71□□□□□ -1.98
HERC4-204ENST00000395198 MUSTN1Q8IVN3 82 aa2.71□□□□□ -1.98
HERC4-204ENST00000395198 TRANK1O15050 2925 aa2.71□□□□□ -1.98
HERC4-204ENST00000395198 A0A087WSZ3 146 aa2.7□□□□□ -1.98
HERC4-204ENST00000395198 IGKV1-17P01599 117 aa2.7□□□□□ -1.98
HERC4-204ENST00000395198 LINC00167Q96N53 147 aa2.7□□□□□ -1.98
HERC4-204ENST00000395198 BAHCC1Q9P281 2608 aa2.7□□□□□ -1.98
HERC4-204ENST00000395198 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.7□□□□□ -1.98
HERC4-204ENST00000395198 A0A1W2PPR1 153 aa2.7□□□□□ -1.98
HERC4-204ENST00000395198 COX6CP09669 75 aa2.7□□□□□ -1.98
HERC4-204ENST00000395198 KLK9Q9UKQ9 250 aa2.7□□□□□ -1.98
HERC4-204ENST00000395198 SVEP1Q4LDE5 3571 aa2.7□□□□□ -1.98
HERC4-204ENST00000395198 WFDC9Q8NEX5 89 aa2.7□□□□□ -1.98
HERC4-204ENST00000395198 DEFB104AQ8WTQ1 72 aa2.7□□□□□ -1.98
HERC4-204ENST00000395198 VPS13AQ96RL7 3174 aa2.69□□□□□ -1.98
HERC4-204ENST00000395198 CSMD2Q7Z408 3487 aa2.69□□□□□ -1.98
HERC4-204ENST00000395198 H7C2G1 150 aa2.69□□□□□ -1.98
HERC4-204ENST00000395198 P0C879 139 aa2.69□□□□□ -1.98
HERC4-204ENST00000395198 DEFB135Q30KP9 77 aa2.69□□□□□ -1.98
HERC4-204ENST00000395198 HIGD1CA8MV81 97 aa2.69□□□□□ -1.98
HERC4-204ENST00000395198 TMEM190Q8WZ59 177 aa2.69□□□□□ -1.98
HERC4-204ENST00000395198 IGLV2-18A0A075B6J9 118 aa2.69□□□□□ -1.98
HERC4-204ENST00000395198 A0A096LPF7 62 aa2.69□□□□□ -1.98
HERC4-204ENST00000395198 PLAC8Q9NZF1 115 aa2.69□□□□□ -1.98
HERC4-204ENST00000395198 A0A0J9YY99 117 aa2.69□□□□□ -1.98
HERC4-204ENST00000395198 PRB2P02812 416 aaPredicted RBP2.69□□□□□ -1.98
HERC4-204ENST00000395198 PDE6HQ13956 83 aa2.69□□□□□ -1.98
HERC4-204ENST00000395198 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.68□□□□□ -1.98
HERC4-204ENST00000395198 C14orf178Q8N769 122 aaPredicted RBP2.68□□□□□ -1.98
HERC4-204ENST00000395198 C9orf163Q8N9P6 203 aa2.68□□□□□ -1.98
HERC4-204ENST00000395198 STAB1Q9NY15 2570 aa2.68□□□□□ -1.98
HERC4-204ENST00000395198 DEFB4AO15263 64 aa2.68□□□□□ -1.98
HERC4-204ENST00000395198 ZNF292O60281 2723 aa2.68□□□□□ -1.98
HERC4-204ENST00000395198 SPART-AS1P0CW21 52 aa2.68□□□□□ -1.98
HERC4-204ENST00000395198 FLNAP21333 2647 aaKnown RBP2.67□□□□□ -1.98
HERC4-204ENST00000395198 IGLV11-55A0A075B6I3 123 aa2.67□□□□□ -1.98
HERC4-204ENST00000395198 CCL18P55774 89 aa2.67□□□□□ -1.98
HERC4-204ENST00000395198 ENHOQ6UWT2 76 aa2.67□□□□□ -1.98
HERC4-204ENST00000395198 C4orf3Q8WVX3 66 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms