RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 GTF2H5Q6ZYL4 71 aa7.46□□□□□ -1.21
RTN1-203ENST00000395090 LINC00526Q96FQ7 95 aa7.46□□□□□ -1.21
RTN1-203ENST00000395090 KRTAP4-2Q9BYR5 136 aa7.46□□□□□ -1.21
RTN1-203ENST00000395090 SRSF9Q13242 221 aaKnown RBP eCLIP7.45□□□□□ -1.22
RTN1-203ENST00000395090 COX17Q14061 63 aa7.45□□□□□ -1.22
RTN1-203ENST00000395090 HIGD2BQ4VC39 106 aa7.45□□□□□ -1.22
RTN1-203ENST00000395090 PRR26Q8N8Z3 221 aa7.45□□□□□ -1.22
RTN1-203ENST00000395090 HIST1H4GQ99525 98 aa7.45□□□□□ -1.22
RTN1-203ENST00000395090 SPANXDQ9BXN6 97 aa7.45□□□□□ -1.22
RTN1-203ENST00000395090 SPANXCQ9NY87 97 aa7.45□□□□□ -1.22
RTN1-203ENST00000395090 SMIM13P0DJ93 91 aa7.45□□□□□ -1.22
RTN1-203ENST00000395090 ERG28Q9UKR5 140 aa7.45□□□□□ -1.22
RTN1-203ENST00000395090 A0A1B0GWB2 263 aa7.44□□□□□ -1.22
RTN1-203ENST00000395090 MEIG1Q5JSS6 88 aa7.44□□□□□ -1.22
RTN1-203ENST00000395090 CBY1Q9Y3M2 126 aa7.44□□□□□ -1.22
RTN1-203ENST00000395090 TRBV30A0A0K0K1B3 111 aa7.43□□□□□ -1.22
RTN1-203ENST00000395090 LRCOL1A6NCL2 159 aa7.43□□□□□ -1.22
RTN1-203ENST00000395090 PSCAO43653 123 aa7.43□□□□□ -1.22
RTN1-203ENST00000395090 RAB37Q96AX2 223 aa7.43□□□□□ -1.22
RTN1-203ENST00000395090 CAMK2N2Q96S95 79 aa7.43□□□□□ -1.22
RTN1-203ENST00000395090 PPDPFQ9H3Y8 114 aa7.43□□□□□ -1.22
RTN1-203ENST00000395090 NHP2Q9NX24 153 aaKnown RBP7.43□□□□□ -1.22
RTN1-203ENST00000395090 K7ERJ3 54 aa7.42□□□□□ -1.22
RTN1-203ENST00000395090 FABP2P12104 132 aa7.42□□□□□ -1.22
RTN1-203ENST00000395090 IFITM1P13164 125 aa7.42□□□□□ -1.22
RTN1-203ENST00000395090 WFDC2Q14508 124 aa7.42□□□□□ -1.22
RTN1-203ENST00000395090 NAA38Q9BRA0 125 aaKnown RBP7.42□□□□□ -1.22
RTN1-203ENST00000395090 C6orf48Q9UBA6 75 aa7.42□□□□□ -1.22
RTN1-203ENST00000395090 SPCS1Q9Y6A9 102 aa7.42□□□□□ -1.22
RTN1-203ENST00000395090 LECT2O14960 151 aa7.41□□□□□ -1.22
RTN1-203ENST00000395090 LINC00158P58513 81 aa7.41□□□□□ -1.22
RTN1-203ENST00000395090 SYCNQ0VAF6 134 aa7.41□□□□□ -1.22
RTN1-203ENST00000395090 OCIAD2Q56VL3 154 aa7.41□□□□□ -1.22
RTN1-203ENST00000395090 C9orf116Q5BN46 136 aaPredicted RBP7.41□□□□□ -1.22
RTN1-203ENST00000395090 Q6ZRU5 148 aa7.41□□□□□ -1.22
RTN1-203ENST00000395090 MUSTN1Q8IVN3 82 aa7.41□□□□□ -1.22
RTN1-203ENST00000395090 A0A0U1RRA0 63 aa7.41□□□□□ -1.22
RTN1-203ENST00000395090 PFN2P35080 140 aa7.41□□□□□ -1.22
RTN1-203ENST00000395090 C14orf177Q52M58 125 aa7.41□□□□□ -1.22
RTN1-203ENST00000395090 DAND5Q8N907 189 aa7.41□□□□□ -1.22
RTN1-203ENST00000395090 LINC00308Q8TCZ7 52 aa7.41□□□□□ -1.22
RTN1-203ENST00000395090 LOC107984156A0A0G2JMH3 177 aa7.4□□□□□ -1.22
RTN1-203ENST00000395090 C1orf134Q5TEV5 83 aa7.4□□□□□ -1.22
RTN1-203ENST00000395090 ARL17AQ8IVW1 177 aa7.4□□□□□ -1.22
RTN1-203ENST00000395090 MIR7-3HGQ8N6C7 128 aa7.4□□□□□ -1.22
RTN1-203ENST00000395090 CNBPP62633 177 aaKnown RBP7.39□□□□□ -1.23
RTN1-203ENST00000395090 SOSTDC1Q6X4U4 206 aa7.39□□□□□ -1.23
RTN1-203ENST00000395090 COPS9Q8WXC6 57 aa7.39□□□□□ -1.23
RTN1-203ENST00000395090 KRTAP4-5Q9BYR2 181 aa7.39□□□□□ -1.23
RTN1-203ENST00000395090 KMT2AQ03164 3969 aa7.39□□□□□ -1.23
RTN1-203ENST00000395090 K7ERU9 68 aa7.38□□□□□ -1.23
RTN1-203ENST00000395090 IGKV2-30P06310 120 aa7.38□□□□□ -1.23
RTN1-203ENST00000395090 RPL24P83731 157 aaKnown RBP7.38□□□□□ -1.23
RTN1-203ENST00000395090 A4D1N5 150 aa7.38□□□□□ -1.23
RTN1-203ENST00000395090 TLX1NBP0CAT3 122 aa7.38□□□□□ -1.23
RTN1-203ENST00000395090 CARD19Q96LW7 228 aa7.38□□□□□ -1.23
RTN1-203ENST00000395090 LCE6AA0A183 80 aa7.37□□□□□ -1.23
RTN1-203ENST00000395090 SND1-IT1Q9HBX3 110 aa7.37□□□□□ -1.23
RTN1-203ENST00000395090 A0A087WTM6 91 aa7.36□□□□□ -1.23
RTN1-203ENST00000395090 NDUFC2-KCTD14E9PQ53 114 aa7.36□□□□□ -1.23
RTN1-203ENST00000395090 ALMS1Q8TCU4 4167 aa7.35□□□□□ -1.23
RTN1-203ENST00000395090 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.35□□□□□ -1.23
RTN1-203ENST00000395090 CFC1BP0CG36 223 aa7.35□□□□□ -1.23
RTN1-203ENST00000395090 CFC1P0CG37 223 aa7.35□□□□□ -1.23
RTN1-203ENST00000395090 NPC2P61916 151 aa7.35□□□□□ -1.23
RTN1-203ENST00000395090 Q8N814 137 aa7.35□□□□□ -1.23
RTN1-203ENST00000395090 DNAH10Q8IVF4 4471 aa7.34□□□□□ -1.23
RTN1-203ENST00000395090 RTL8CO15255 209 aa7.34□□□□□ -1.24
RTN1-203ENST00000395090 Q6ZRP5 223 aa7.34□□□□□ -1.24
RTN1-203ENST00000395090 DNAH6Q9C0G6 4158 aa7.33□□□□□ -1.24
RTN1-203ENST00000395090 A0A0B4J2C4 111 aa7.33□□□□□ -1.24
RTN1-203ENST00000395090 SEC61BP60468 96 aaKnown RBP7.33□□□□□ -1.24
RTN1-203ENST00000395090 NDUFC2O95298 119 aa7.32□□□□□ -1.24
RTN1-203ENST00000395090 C9orf163Q8N9P6 203 aa7.32□□□□□ -1.24
RTN1-203ENST00000395090 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.31□□□□□ -1.24
RTN1-203ENST00000395090 IGLV5-52A0A0A0MRZ9 124 aa7.31□□□□□ -1.24
RTN1-203ENST00000395090 VPS25Q9BRG1 176 aa7.31□□□□□ -1.24
RTN1-203ENST00000395090 PRO1854Q9UHT4 67 aa7.31□□□□□ -1.24
RTN1-203ENST00000395090 IGKV2-28A0A075B6P5 120 aa7.3□□□□□ -1.24
RTN1-203ENST00000395090 LOC107984640A0A0U1RRK4 108 aa7.3□□□□□ -1.24
RTN1-203ENST00000395090 F8W1H4 67 aa7.3□□□□□ -1.24
RTN1-203ENST00000395090 TSPAN13O95857 204 aa7.3□□□□□ -1.24
RTN1-203ENST00000395090 IGKV2D-28P01615 120 aa7.3□□□□□ -1.24
RTN1-203ENST00000395090 Q8NDZ9 215 aa7.3□□□□□ -1.24
RTN1-203ENST00000395090 XAGE1AQ9HD64 81 aa7.3□□□□□ -1.24
RTN1-203ENST00000395090 PRO0461Q9UI25 63 aa7.3□□□□□ -1.24
RTN1-203ENST00000395090 GAGE2EQ4V326 116 aa7.3□□□□□ -1.24
RTN1-203ENST00000395090 C9orf129Q5T035 196 aaKnown RBP7.3□□□□□ -1.24
RTN1-203ENST00000395090 GAGE2DQ9UEU5 116 aa7.3□□□□□ -1.24
RTN1-203ENST00000395090 LYRM7Q5U5X0 104 aa7.29□□□□□ -1.24
RTN1-203ENST00000395090 SDIM1Q6ZPB5 146 aa7.29□□□□□ -1.24
RTN1-203ENST00000395090 DNAH2Q9P225 4427 aa7.29□□□□□ -1.24
RTN1-203ENST00000395090 C16orf90A8MZG2 172 aa7.28□□□□□ -1.24
RTN1-203ENST00000395090 H3BMG7 143 aa7.28□□□□□ -1.24
RTN1-203ENST00000395090 RPL18AQ02543 176 aaKnown RBP7.28□□□□□ -1.24
RTN1-203ENST00000395090 TRAV13-2A0A0B4J235 113 aa7.27□□□□□ -1.25
RTN1-203ENST00000395090 PRR3P79522 188 aaKnown RBP7.27□□□□□ -1.25
RTN1-203ENST00000395090 LINC00337Q8N6G1 96 aa7.27□□□□□ -1.25
RTN1-203ENST00000395090 PKIGQ9Y2B9 76 aa7.27□□□□□ -1.25
RTN1-203ENST00000395090 TRBV10-2A0A0K0K1G8 114 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms