RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 A0A087WVE0 104 aa8.13□□□□□ -1.11
UBE2D3-209ENST00000394804 UNQ6190/PRO20217Q6UXQ8 127 aa8.13□□□□□ -1.11
UBE2D3-209ENST00000394804 ZFHX3Q15911 3703 aa8.12□□□□□ -1.11
UBE2D3-209ENST00000394804 C20orf197Q8N268 126 aa8.12□□□□□ -1.11
UBE2D3-209ENST00000394804 TMEM258P61165 79 aa8.11□□□□□ -1.11
UBE2D3-209ENST00000394804 DEFB105AQ8NG35 78 aa8.1□□□□□ -1.11
UBE2D3-209ENST00000394804 SMCR5Q8TEV8 140 aa8.1□□□□□ -1.11
UBE2D3-209ENST00000394804 LY6G6DO95868 133 aa8.1□□□□□ -1.11
UBE2D3-209ENST00000394804 NIPBLQ6KC79 2804 aaeCLIP8.09□□□□□ -1.11
UBE2D3-209ENST00000394804 GIG44P09565 113 aaPredicted RBP8.09□□□□□ -1.11
UBE2D3-209ENST00000394804 WFDC9Q8NEX5 89 aa8.09□□□□□ -1.11
UBE2D3-209ENST00000394804 F8WEM9 126 aa8.09□□□□□ -1.11
UBE2D3-209ENST00000394804 NREPQ16612 68 aa8.09□□□□□ -1.11
UBE2D3-209ENST00000394804 PLAC8L1A1L4L8 177 aa8.08□□□□□ -1.12
UBE2D3-209ENST00000394804 CR1P17927 2039 aa8.08□□□□□ -1.12
UBE2D3-209ENST00000394804 CSNK1G2-AS1Q8NCQ2 148 aa8.08□□□□□ -1.12
UBE2D3-209ENST00000394804 INAFM1C9JVW0 142 aa8.07□□□□□ -1.12
UBE2D3-209ENST00000394804 FUSP35637 526 aaKnown RBP eCLIP8.07□□□□□ -1.12
UBE2D3-209ENST00000394804 LINC00575Q6W349 94 aa8.07□□□□□ -1.12
UBE2D3-209ENST00000394804 ETDCA0A1B0GVM5 59 aa8.06□□□□□ -1.12
UBE2D3-209ENST00000394804 ZNF73O43830 326 aaPredicted RBP8.06□□□□□ -1.12
UBE2D3-209ENST00000394804 C6orf223Q8N319 242 aa8.06□□□□□ -1.12
UBE2D3-209ENST00000394804 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.06□□□□□ -1.12
UBE2D3-209ENST00000394804 RMI2Q96E14 147 aa8.06□□□□□ -1.12
UBE2D3-209ENST00000394804 X6R8D5 127 aa8.06□□□□□ -1.12
UBE2D3-209ENST00000394804 TRBV10-3A0A0K0K1G6 114 aa8.06□□□□□ -1.12
UBE2D3-209ENST00000394804 SCXQ7RTU7 201 aa8.05□□□□□ -1.12
UBE2D3-209ENST00000394804 C19orf73Q9NVV2 129 aa8.05□□□□□ -1.12
UBE2D3-209ENST00000394804 M0R378 163 aa8.04□□□□□ -1.12
UBE2D3-209ENST00000394804 KPRPQ5T749 579 aaPredicted RBP8.04□□□□□ -1.12
UBE2D3-209ENST00000394804 FAM19A1Q7Z5A9 133 aa8.03□□□□□ -1.12
UBE2D3-209ENST00000394804 FAM236DA0A1B0GTK5 79 aa8.03□□□□□ -1.12
UBE2D3-209ENST00000394804 IGHV4-30-4P0DP06 118 aa8.03□□□□□ -1.12
UBE2D3-209ENST00000394804 FAM236CP0DP71 79 aa8.03□□□□□ -1.12
UBE2D3-209ENST00000394804 CRYGAP11844 174 aa8.03□□□□□ -1.12
UBE2D3-209ENST00000394804 KRTAP1-1Q07627 177 aa8.03□□□□□ -1.12
UBE2D3-209ENST00000394804 MXRA5Q9NR99 2828 aa8.03□□□□□ -1.12
UBE2D3-209ENST00000394804 NSD1Q96L73 2696 aaPredicted RBP8.02□□□□□ -1.13
UBE2D3-209ENST00000394804 SVIPQ8NHG7 77 aa8.02□□□□□ -1.13
UBE2D3-209ENST00000394804 DPH3Q96FX2 82 aa8.02□□□□□ -1.13
UBE2D3-209ENST00000394804 UBE2BP63146 152 aa8.01□□□□□ -1.13
UBE2D3-209ENST00000394804 EGFEM1PQ0D2K5 195 aa8.01□□□□□ -1.13
UBE2D3-209ENST00000394804 SYCNQ0VAF6 134 aa8.01□□□□□ -1.13
UBE2D3-209ENST00000394804 BPY2O14599 106 aa8□□□□□ -1.13
UBE2D3-209ENST00000394804 PSCAO43653 123 aa8□□□□□ -1.13
UBE2D3-209ENST00000394804 CELA1Q9UNI1 258 aa8□□□□□ -1.13
UBE2D3-209ENST00000394804 Q8N3U1 123 aa8□□□□□ -1.13
UBE2D3-209ENST00000394804 CUBNO60494 3623 aa8□□□□□ -1.13
UBE2D3-209ENST00000394804 TRAV7A0A075B6U4 112 aa7.99□□□□□ -1.13
UBE2D3-209ENST00000394804 DEFB131BA0A096LNP1 70 aa7.99□□□□□ -1.13
UBE2D3-209ENST00000394804 C10orf25Q5T742 122 aa7.99□□□□□ -1.13
UBE2D3-209ENST00000394804 C11orf45Q8TAV5 145 aa7.99□□□□□ -1.13
UBE2D3-209ENST00000394804 Q6ZVQ6 151 aa7.98□□□□□ -1.13
UBE2D3-209ENST00000394804 UBE2DNLQ8IWF7 75 aa7.98□□□□□ -1.13
UBE2D3-209ENST00000394804 ATRQ13535 2644 aa7.98□□□□□ -1.13
UBE2D3-209ENST00000394804 LYPD5Q6UWN5 251 aa7.98□□□□□ -1.13
UBE2D3-209ENST00000394804 LINC00612Q8N6U2 182 aa7.98□□□□□ -1.13
UBE2D3-209ENST00000394804 NF1P21359 2839 aa7.98□□□□□ -1.13
UBE2D3-209ENST00000394804 LOC107984640A0A0U1RRK4 108 aa7.97□□□□□ -1.13
UBE2D3-209ENST00000394804 KIAA0087Q14695 138 aa7.96□□□□□ -1.13
UBE2D3-209ENST00000394804 C9orf129Q5T035 196 aaKnown RBP7.96□□□□□ -1.13
UBE2D3-209ENST00000394804 LINC01547P58512 204 aaPredicted RBP7.96□□□□□ -1.14
UBE2D3-209ENST00000394804 SNURFQ9Y675 71 aa7.96□□□□□ -1.14
UBE2D3-209ENST00000394804 ANK3Q12955 4377 aaKnown RBP7.96□□□□□ -1.14
UBE2D3-209ENST00000394804 A0A0J9YWU9 116 aa7.96□□□□□ -1.14
UBE2D3-209ENST00000394804 C5orf47Q569G3 176 aa7.96□□□□□ -1.14
UBE2D3-209ENST00000394804 FAM19A5Q7Z5A7 132 aaPredicted RBP7.96□□□□□ -1.14
UBE2D3-209ENST00000394804 NDUFC2-KCTD14E9PQ53 114 aa7.95□□□□□ -1.14
UBE2D3-209ENST00000394804 WFDC10BQ8IUB3 73 aa7.95□□□□□ -1.14
UBE2D3-209ENST00000394804 C3orf84H3BNL1 204 aa7.95□□□□□ -1.14
UBE2D3-209ENST00000394804 C6orf48Q9UBA6 75 aa7.95□□□□□ -1.14
UBE2D3-209ENST00000394804 Q6ZQT0 140 aa7.94□□□□□ -1.14
UBE2D3-209ENST00000394804 NDUFC1O43677 76 aa7.94□□□□□ -1.14
UBE2D3-209ENST00000394804 C2orf48Q96LS8 159 aa7.93□□□□□ -1.14
UBE2D3-209ENST00000394804 RETNQ9HD89 108 aa7.93□□□□□ -1.14
UBE2D3-209ENST00000394804 LOC110117498A0A087WWA1 95 aa7.93□□□□□ -1.14
UBE2D3-209ENST00000394804 Q6ZRU5 148 aa7.93□□□□□ -1.14
UBE2D3-209ENST00000394804 Q6ZTC4 211 aa7.93□□□□□ -1.14
UBE2D3-209ENST00000394804 Q8NAQ8 132 aa7.93□□□□□ -1.14
UBE2D3-209ENST00000394804 OXLD1Q5BKU9 147 aa7.92□□□□□ -1.14
UBE2D3-209ENST00000394804 CXCL6P80162 114 aa7.92□□□□□ -1.14
UBE2D3-209ENST00000394804 MRAPQ8TCY5 172 aa7.92□□□□□ -1.14
UBE2D3-209ENST00000394804 DHRS4-AS1Q9P1J3 65 aa7.92□□□□□ -1.14
UBE2D3-209ENST00000394804 OBSCN-AS1Q96MR7 158 aa7.91□□□□□ -1.14
UBE2D3-209ENST00000394804 SPATA3Q8NHX4 192 aa7.91□□□□□ -1.14
UBE2D3-209ENST00000394804 IGLV6-57P01721 117 aa7.9□□□□□ -1.14
UBE2D3-209ENST00000394804 RPS28P62857 69 aaKnown RBP7.9□□□□□ -1.14
UBE2D3-209ENST00000394804 GVQW2A0A096LPI5 108 aaPredicted RBP7.9□□□□□ -1.14
UBE2D3-209ENST00000394804 LINC00167Q96N53 147 aa7.9□□□□□ -1.14
UBE2D3-209ENST00000394804 BCE1O60756 84 aa7.89□□□□□ -1.15
UBE2D3-209ENST00000394804 NANOS2P60321 138 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-209ENST00000394804 ATP5EP56381 51 aaPredicted RBP7.89□□□□□ -1.15
UBE2D3-209ENST00000394804 RPL37AP8A6NKH3 93 aa7.88□□□□□ -1.15
UBE2D3-209ENST00000394804 F8WDY8 70 aa7.88□□□□□ -1.15
UBE2D3-209ENST00000394804 ELOF1P60002 83 aaKnown RBP7.88□□□□□ -1.15
UBE2D3-209ENST00000394804 TRBV7-6A0A0J9YX20 115 aa7.88□□□□□ -1.15
UBE2D3-209ENST00000394804 SERP1Q9Y6X1 66 aa7.87□□□□□ -1.15
UBE2D3-209ENST00000394804 COL6A5A8TX70 2615 aa7.87□□□□□ -1.15
UBE2D3-209ENST00000394804 TRAV10A0A0B4J240 114 aa7.87□□□□□ -1.15
UBE2D3-209ENST00000394804 PRR34Q9NV39 138 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms