RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 TRAV10A0A0B4J240 114 aa10.71□□□□□ -0.69
PTBP1-204ENST00000394601 IGLV10-54A0A075B6I4 117 aa10.71□□□□□ -0.7
PTBP1-204ENST00000394601 M0R2N4 97 aa10.71□□□□□ -0.7
PTBP1-204ENST00000394601 H0YGX0 51 aa10.7□□□□□ -0.7
PTBP1-204ENST00000394601 A0A087WZ39 114 aa10.7□□□□□ -0.7
PTBP1-204ENST00000394601 SS18Q15532 418 aa10.69□□□□□ -0.7
PTBP1-204ENST00000394601 C9orf116Q5BN46 136 aaPredicted RBP10.69□□□□□ -0.7
PTBP1-204ENST00000394601 CCKP06307 115 aa10.69□□□□□ -0.7
PTBP1-204ENST00000394601 LY6G6DO95868 133 aa10.68□□□□□ -0.7
PTBP1-204ENST00000394601 DEFB130BP0DP73 79 aa10.68□□□□□ -0.7
PTBP1-204ENST00000394601 DEFB130AP0DP74 79 aa10.68□□□□□ -0.7
PTBP1-204ENST00000394601 HECTD1Q9ULT8 2610 aa10.68□□□□□ -0.7
PTBP1-204ENST00000394601 DNAH3Q8TD57 4116 aa10.67□□□□□ -0.7
PTBP1-204ENST00000394601 LINC00959A0A1B0GUT2 108 aa10.67□□□□□ -0.7
PTBP1-204ENST00000394601 WIPF1O43516 503 aa10.67□□□□□ -0.7
PTBP1-204ENST00000394601 C6orf99Q4VX62 202 aa10.66□□□□□ -0.7
PTBP1-204ENST00000394601 Q8N9L7 120 aa10.66□□□□□ -0.7
PTBP1-204ENST00000394601 NDUFC2O95298 119 aa10.65□□□□□ -0.7
PTBP1-204ENST00000394601 A0A1B0GUV1 79 aa10.65□□□□□ -0.7
PTBP1-204ENST00000394601 GYPEP15421 78 aa10.65□□□□□ -0.7
PTBP1-204ENST00000394601 HIVEP1P15822 2718 aa10.65□□□□□ -0.7
PTBP1-204ENST00000394601 PRO0628Q9UI54 55 aa10.65□□□□□ -0.71
PTBP1-204ENST00000394601 NOTCH2Q04721 2471 aa10.64□□□□□ -0.71
PTBP1-204ENST00000394601 PF4P02776 101 aa10.64□□□□□ -0.71
PTBP1-204ENST00000394601 H7BZZ5 65 aa10.63□□□□□ -0.71
PTBP1-204ENST00000394601 TM2D3Q9BRN9 247 aa10.62□□□□□ -0.71
PTBP1-204ENST00000394601 IBA57-AS1B1ANH7 110 aa10.61□□□□□ -0.71
PTBP1-204ENST00000394601 PRO0255Q9UI72 69 aa10.61□□□□□ -0.71
PTBP1-204ENST00000394601 LYPD5Q6UWN5 251 aa10.6□□□□□ -0.71
PTBP1-204ENST00000394601 Q8N3U1 123 aa10.6□□□□□ -0.71
PTBP1-204ENST00000394601 Q8N814 137 aa10.6□□□□□ -0.71
PTBP1-204ENST00000394601 TEP1Q99973 2627 aaKnown RBP10.6□□□□□ -0.71
PTBP1-204ENST00000394601 LINC00269Q8N2A0 174 aa10.59□□□□□ -0.71
PTBP1-204ENST00000394601 SERP1Q9Y6X1 66 aa10.59□□□□□ -0.71
PTBP1-204ENST00000394601 FP248Q71RG6 208 aaPredicted RBP10.59□□□□□ -0.71
PTBP1-204ENST00000394601 TRBV7-6A0A0J9YX20 115 aa10.59□□□□□ -0.71
PTBP1-204ENST00000394601 JMJD7-PLA2G4BH0Y9G9 81 aa10.59□□□□□ -0.71
PTBP1-204ENST00000394601 INAFM1C9JVW0 142 aa10.58□□□□□ -0.72
PTBP1-204ENST00000394601 TMEM256-PLSCR3K7ERE1 68 aa10.58□□□□□ -0.72
PTBP1-204ENST00000394601 LYRM9A8MSI8 78 aa10.58□□□□□ -0.72
PTBP1-204ENST00000394601 DEFB4AO15263 64 aa10.57□□□□□ -0.72
PTBP1-204ENST00000394601 KIAA0087Q14695 138 aa10.57□□□□□ -0.72
PTBP1-204ENST00000394601 LINC01547P58512 204 aaPredicted RBP10.57□□□□□ -0.72
PTBP1-204ENST00000394601 C9orf66Q5T8R8 295 aa10.57□□□□□ -0.72
PTBP1-204ENST00000394601 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.57□□□□□ -0.72
PTBP1-204ENST00000394601 CELA1Q9UNI1 258 aa10.57□□□□□ -0.72
PTBP1-204ENST00000394601 PRR4Q16378 134 aa10.56□□□□□ -0.72
PTBP1-204ENST00000394601 DEFB135Q30KP9 77 aa10.56□□□□□ -0.72
PTBP1-204ENST00000394601 Q8NAQ8 132 aa10.56□□□□□ -0.72
PTBP1-204ENST00000394601 ATRQ13535 2644 aa10.56□□□□□ -0.72
PTBP1-204ENST00000394601 C1orf195Q5TG92 126 aa10.56□□□□□ -0.72
PTBP1-204ENST00000394601 Q8IZM0 81 aa10.56□□□□□ -0.72
PTBP1-204ENST00000394601 Q6ZQY7 126 aa10.55□□□□□ -0.72
PTBP1-204ENST00000394601 IGHV4-28A0A0C4DH34 117 aa10.55□□□□□ -0.72
PTBP1-204ENST00000394601 Q6ZVQ6 151 aa10.55□□□□□ -0.72
PTBP1-204ENST00000394601 SMIM26A0A096LP01 95 aa10.54□□□□□ -0.72
PTBP1-204ENST00000394601 TRAV7A0A075B6U4 112 aa10.53□□□□□ -0.72
PTBP1-204ENST00000394601 FAM229BQ4G0N7 80 aa10.53□□□□□ -0.72
PTBP1-204ENST00000394601 NANOS2P60321 138 aaKnown RBP10.52□□□□□ -0.73
PTBP1-204ENST00000394601 V9GYY9 64 aa10.52□□□□□ -0.73
PTBP1-204ENST00000394601 PKD1L1Q8TDX9 2849 aa10.52□□□□□ -0.73
PTBP1-204ENST00000394601 OBSCN-AS1Q96MR7 158 aa10.51□□□□□ -0.73
PTBP1-204ENST00000394601 NDUFC2-KCTD14E9PQ53 114 aa10.51□□□□□ -0.73
PTBP1-204ENST00000394601 CD164L2Q6UWJ8 174 aa10.51□□□□□ -0.73
PTBP1-204ENST00000394601 Q8NDZ9 215 aa10.51□□□□□ -0.73
PTBP1-204ENST00000394601 XAGE1AQ9HD64 81 aa10.51□□□□□ -0.73
PTBP1-204ENST00000394601 DNAH1Q9P2D7 4330 aa10.5□□□□□ -0.73
PTBP1-204ENST00000394601 MIFP14174 115 aa10.49□□□□□ -0.73
PTBP1-204ENST00000394601 SEC61GP60059 68 aa10.49□□□□□ -0.73
PTBP1-204ENST00000394601 CHCHD10Q8WYQ3 142 aaPredicted RBP10.49□□□□□ -0.73
PTBP1-204ENST00000394601 BAHCC1Q9P281 2608 aa10.48□□□□□ -0.73
PTBP1-204ENST00000394601 C3orf84H3BNL1 204 aa10.47□□□□□ -0.73
PTBP1-204ENST00000394601 APOC4P55056 127 aa10.47□□□□□ -0.73
PTBP1-204ENST00000394601 REG3AQ06141 175 aa10.47□□□□□ -0.73
PTBP1-204ENST00000394601 C6orf223Q8N319 242 aa10.47□□□□□ -0.73
PTBP1-204ENST00000394601 ATP5EP2Q5VTU8 51 aa10.47□□□□□ -0.73
PTBP1-204ENST00000394601 ANGP03950 147 aaKnown RBP10.46□□□□□ -0.73
PTBP1-204ENST00000394601 NREPQ16612 68 aa10.46□□□□□ -0.74
PTBP1-204ENST00000394601 DEFB105AQ8NG35 78 aa10.45□□□□□ -0.74
PTBP1-204ENST00000394601 BPY2O14599 106 aa10.45□□□□□ -0.74
PTBP1-204ENST00000394601 Q6ZQT0 140 aa10.45□□□□□ -0.74
PTBP1-204ENST00000394601 PSPHP1O15172 72 aa10.44□□□□□ -0.74
PTBP1-204ENST00000394601 HTN3P15516 51 aa10.44□□□□□ -0.74
PTBP1-204ENST00000394601 COX17Q14061 63 aa10.44□□□□□ -0.74
PTBP1-204ENST00000394601 LINC00167Q96N53 147 aa10.44□□□□□ -0.74
PTBP1-204ENST00000394601 PRR34Q9NV39 138 aa10.44□□□□□ -0.74
PTBP1-204ENST00000394601 IGHV4-30-4P0DP06 118 aa10.44□□□□□ -0.74
PTBP1-204ENST00000394601 TMEM254Q8TBM7 123 aa10.44□□□□□ -0.74
PTBP1-204ENST00000394601 FBN1P35555 2871 aaKnown RBP10.43□□□□□ -0.74
PTBP1-204ENST00000394601 HIGD2AQ9BW72 106 aa10.43□□□□□ -0.74
PTBP1-204ENST00000394601 C10orf25Q5T742 122 aa10.42□□□□□ -0.74
PTBP1-204ENST00000394601 UNQ6190/PRO20217Q6UXQ8 127 aa10.42□□□□□ -0.74
PTBP1-204ENST00000394601 LELP1Q5T871 98 aa10.41□□□□□ -0.74
PTBP1-204ENST00000394601 FAM30AQ9NZY2 134 aa10.4□□□□□ -0.74
PTBP1-204ENST00000394601 TENM3Q9P273 2699 aa10.4□□□□□ -0.74
PTBP1-204ENST00000394601 KLKP1Q107X0 134 aa10.4□□□□□ -0.74
PTBP1-204ENST00000394601 SPART-AS1P0CW21 52 aa10.4□□□□□ -0.75
PTBP1-204ENST00000394601 LINC00575Q6W349 94 aa10.39□□□□□ -0.75
PTBP1-204ENST00000394601 FUSP35637 526 aaKnown RBP eCLIP10.39□□□□□ -0.758e-7■■□□□ 13.8
PTBP1-204ENST00000394601 ZNF561-AS1K7EIQ3 104 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms