RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 LOC110117498A0A087WWA1 95 aa9.56□□□□□ -0.88
USP49-203ENST00000394253 MIR22HGQ0VDD5 57 aa9.56□□□□□ -0.88
USP49-203ENST00000394253 SPATA3Q8NHX4 192 aa9.55□□□□□ -0.88
USP49-203ENST00000394253 MOBPQ13875 183 aa9.55□□□□□ -0.88
USP49-203ENST00000394253 CEP295Q9C0D2 2601 aa9.54□□□□□ -0.88
USP49-203ENST00000394253 LMO4P61968 165 aa9.54□□□□□ -0.88
USP49-203ENST00000394253 A8MTW9 85 aa9.53□□□□□ -0.88
USP49-203ENST00000394253 DMBT1Q9UGM3 2413 aaPredicted RBP9.53□□□□□ -0.88
USP49-203ENST00000394253 EDN2P20800 178 aa9.53□□□□□ -0.88
USP49-203ENST00000394253 GAS8-AS1O95177 125 aa9.52□□□□□ -0.89
USP49-203ENST00000394253 BRWD1-AS2P59051 145 aa9.51□□□□□ -0.89
USP49-203ENST00000394253 KIAA0087Q14695 138 aa9.51□□□□□ -0.89
USP49-203ENST00000394253 C11orf21Q9P2W6 132 aa9.51□□□□□ -0.89
USP49-203ENST00000394253 COA5Q86WW8 74 aa9.5□□□□□ -0.89
USP49-203ENST00000394253 SPACA4Q8TDM5 124 aa9.5□□□□□ -0.89
USP49-203ENST00000394253 C11orf71Q6IPW1 123 aa9.49□□□□□ -0.89
USP49-203ENST00000394253 TM2D3Q9BRN9 247 aa9.49□□□□□ -0.89
USP49-203ENST00000394253 EPM2AB3EWF7 344 aa9.49□□□□□ -0.89
USP49-203ENST00000394253 APLNQ9ULZ1 77 aa9.49□□□□□ -0.89
USP49-203ENST00000394253 CDC42SE1Q9NRR8 79 aa9.48□□□□□ -0.89
USP49-203ENST00000394253 STAB1Q9NY15 2570 aa9.48□□□□□ -0.89
USP49-203ENST00000394253 Q6ZQT0 140 aa9.48□□□□□ -0.89
USP49-203ENST00000394253 IGLV4-60A0A075B6I1 120 aa9.48□□□□□ -0.89
USP49-203ENST00000394253 FAM229AH3BQW9 127 aa9.48□□□□□ -0.89
USP49-203ENST00000394253 PRR15Q8IV56 129 aa9.48□□□□□ -0.89
USP49-203ENST00000394253 IGLV1-40P01703 118 aa9.46□□□□□ -0.89
USP49-203ENST00000394253 Q8NBF4 154 aa9.46□□□□□ -0.89
USP49-203ENST00000394253 LINC00310P59036 64 aa9.46□□□□□ -0.89
USP49-203ENST00000394253 MUC22E2RYF6 1773 aaPredicted RBP9.45□□□□□ -0.9
USP49-203ENST00000394253 SMCR5Q8TEV8 140 aa9.45□□□□□ -0.9
USP49-203ENST00000394253 LY6G6DO95868 133 aa9.45□□□□□ -0.9
USP49-203ENST00000394253 ATRQ13535 2644 aa9.45□□□□□ -0.9
USP49-203ENST00000394253 INAFM1C9JVW0 142 aa9.44□□□□□ -0.9
USP49-203ENST00000394253 FAM19A4Q96LR4 140 aa9.44□□□□□ -0.9
USP49-203ENST00000394253 MAST4O15021 2626 aa9.44□□□□□ -0.9
USP49-203ENST00000394253 FHL2Q14192 279 aa9.44□□□□□ -0.9
USP49-203ENST00000394253 NBEAL1Q6ZS30 2694 aa9.43□□□□□ -0.9
USP49-203ENST00000394253 COX8CQ7Z4L0 72 aa9.43□□□□□ -0.9
USP49-203ENST00000394253 C1orf134Q5TEV5 83 aa9.43□□□□□ -0.9
USP49-203ENST00000394253 C19orf84I3L1E1 186 aa9.43□□□□□ -0.9
USP49-203ENST00000394253 C22orf24Q9Y442 160 aa9.42□□□□□ -0.9
USP49-203ENST00000394253 LINC01006Q8NI28 216 aa9.42□□□□□ -0.9
USP49-203ENST00000394253 CSNK1G2-AS1Q8NCQ2 148 aa9.42□□□□□ -0.9
USP49-203ENST00000394253 A8MUN3 132 aa9.42□□□□□ -0.9
USP49-203ENST00000394253 C9orf129Q5T035 196 aaKnown RBP9.42□□□□□ -0.9
USP49-203ENST00000394253 A8MWP4 228 aa9.41□□□□□ -0.9
USP49-203ENST00000394253 TRBV7-4A0A0J9YYF1 115 aa9.4□□□□□ -0.9
USP49-203ENST00000394253 LINC01546A6NGU7 62 aa9.4□□□□□ -0.9
USP49-203ENST00000394253 CFAP46Q8IYW2 2715 aa9.4□□□□□ -0.9
USP49-203ENST00000394253 COL4A3Q01955 1670 aa9.4□□□□□ -0.9
USP49-203ENST00000394253 IGLV5-39A0A0G2JS06 123 aa9.4□□□□□ -0.91
USP49-203ENST00000394253 Q6ZPA2 131 aa9.4□□□□□ -0.91
USP49-203ENST00000394253 URB1-AS1Q96HZ7 61 aa9.4□□□□□ -0.91
USP49-203ENST00000394253 Q6ZRX8 168 aa9.39□□□□□ -0.91
USP49-203ENST00000394253 ZNF580Q9UK33 172 aa9.39□□□□□ -0.91
USP49-203ENST00000394253 KLKP1Q107X0 134 aa9.39□□□□□ -0.91
USP49-203ENST00000394253 LINC00476Q8WZB0 136 aa9.39□□□□□ -0.91
USP49-203ENST00000394253 MGAM2Q2M2H8 2515 aa9.39□□□□□ -0.91
USP49-203ENST00000394253 CENPEQ02224 2701 aa9.38□□□□□ -0.91
USP49-203ENST00000394253 Q6ZRU5 148 aa9.38□□□□□ -0.91
USP49-203ENST00000394253 C1orf229Q6ZS94 237 aaPredicted RBP9.38□□□□□ -0.91
USP49-203ENST00000394253 C10orf99Q6UWK7 81 aa9.36□□□□□ -0.91
USP49-203ENST00000394253 LYPD5Q6UWN5 251 aa9.36□□□□□ -0.91
USP49-203ENST00000394253 A0A0A0MQY5 61 aa9.36□□□□□ -0.91
USP49-203ENST00000394253 PLA2G5P39877 138 aa9.36□□□□□ -0.91
USP49-203ENST00000394253 LINC00483Q53H64 154 aa9.35□□□□□ -0.91
USP49-203ENST00000394253 LINC00336Q6ZUF6 198 aa9.34□□□□□ -0.91
USP49-203ENST00000394253 Q96NJ1 140 aa9.34□□□□□ -0.91
USP49-203ENST00000394253 IGLV1-51P01701 117 aa9.34□□□□□ -0.91
USP49-203ENST00000394253 KIF25-AS1Q9Y6Z4 181 aa9.33□□□□□ -0.92
USP49-203ENST00000394253 CENPFP49454 3210 aa9.33□□□□□ -0.92
USP49-203ENST00000394253 PRO3102Q9H379 93 aa9.33□□□□□ -0.92
USP49-203ENST00000394253 A0A096LNJ9 63 aa9.33□□□□□ -0.92
USP49-203ENST00000394253 ODF3L2Q3SX64 289 aa9.33□□□□□ -0.92
USP49-203ENST00000394253 TYMSOSQ8TAI1 123 aa9.32□□□□□ -0.92
USP49-203ENST00000394253 PRO0461Q9UI25 63 aa9.32□□□□□ -0.92
USP49-203ENST00000394253 C18orf65Q6ZTR6 163 aa9.32□□□□□ -0.92
USP49-203ENST00000394253 LINC00167Q96N53 147 aa9.3□□□□□ -0.92
USP49-203ENST00000394253 SMCPP49901 116 aaPredicted RBP9.3□□□□□ -0.92
USP49-203ENST00000394253 C8orf17Q9NRJ1 99 aa9.3□□□□□ -0.92
USP49-203ENST00000394253 IGHV3OR16-9A0A0B4J2B5 98 aa9.3□□□□□ -0.92
USP49-203ENST00000394253 Q8NA96 180 aa9.3□□□□□ -0.92
USP49-203ENST00000394253 MRPL34Q9BQ48 92 aaKnown RBP9.29□□□□□ -0.92
USP49-203ENST00000394253 Q1T7F1 81 aa9.29□□□□□ -0.92
USP49-203ENST00000394253 IGLV5-45A0A087WSX0 123 aa9.28□□□□□ -0.92
USP49-203ENST00000394253 BRI3O95415 125 aa9.28□□□□□ -0.92
USP49-203ENST00000394253 FAM218AQ96MZ4 157 aa9.27□□□□□ -0.93
USP49-203ENST00000394253 H3BS24 57 aa9.27□□□□□ -0.93
USP49-203ENST00000394253 Q6ZRP5 223 aa9.27□□□□□ -0.93
USP49-203ENST00000394253 SPANXA2-OT1Q8N9U9 137 aa9.26□□□□□ -0.93
USP49-203ENST00000394253 K7EQZ3 153 aa9.26□□□□□ -0.93
USP49-203ENST00000394253 CRIP3Q6Q6R5 217 aa9.26□□□□□ -0.93
USP49-203ENST00000394253 C16orf90A8MZG2 172 aa9.25□□□□□ -0.93
USP49-203ENST00000394253 Q6ZSN1 163 aa9.24□□□□□ -0.93
USP49-203ENST00000394253 RPL37AP61513 92 aaKnown RBP9.24□□□□□ -0.93
USP49-203ENST00000394253 BAHCC1Q9P281 2608 aa9.23□□□□□ -0.93
USP49-203ENST00000394253 COX6B2Q6YFQ2 88 aa9.22□□□□□ -0.93
USP49-203ENST00000394253 ST20-AS1Q8NBB2 130 aa9.22□□□□□ -0.93
USP49-203ENST00000394253 IGLV6-57P01721 117 aa9.2□□□□□ -0.94
USP49-203ENST00000394253 AVPP01185 164 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms