RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 PTPN13Q12923 2485 aa15.43■□□□□ 0.06
RARA-202ENST00000394081 F8WEM9 126 aa15.43■□□□□ 0.06
RARA-202ENST00000394081 ERC2-IT1O76042 136 aa15.43■□□□□ 0.06
RARA-202ENST00000394081 SPATA3Q8NHX4 192 aa15.43■□□□□ 0.06
RARA-202ENST00000394081 RMI2Q96E14 147 aa15.42■□□□□ 0.06
RARA-202ENST00000394081 WNK1Q9H4A3 2382 aa15.42■□□□□ 0.06
RARA-202ENST00000394081 USP9XQ93008 2570 aaPredicted RBP15.41■□□□□ 0.06
RARA-202ENST00000394081 ANGP03950 147 aaKnown RBP15.41■□□□□ 0.06
RARA-202ENST00000394081 SNURFQ9Y675 71 aa15.41■□□□□ 0.06
RARA-202ENST00000394081 MAST4O15021 2626 aa15.41■□□□□ 0.06
RARA-202ENST00000394081 CYSRT1A8MQ03 144 aa15.41■□□□□ 0.06
RARA-202ENST00000394081 DEFB113Q30KQ7 82 aa15.41■□□□□ 0.06
RARA-202ENST00000394081 LINC01006Q8NI28 216 aa15.41■□□□□ 0.06
RARA-202ENST00000394081 DIRC1Q969H9 104 aa15.41■□□□□ 0.06
RARA-202ENST00000394081 GVQW2A0A096LPI5 108 aaPredicted RBP15.4■□□□□ 0.06
RARA-202ENST00000394081 TRBV7-6A0A0J9YX20 115 aa15.4■□□□□ 0.06
RARA-202ENST00000394081 LRRK2Q5S007 2527 aa15.4■□□□□ 0.06
RARA-202ENST00000394081 UTP20O75691 2785 aaKnown RBP15.4■□□□□ 0.06
RARA-202ENST00000394081 SPAG11BQ08648 103 aa15.4■□□□□ 0.06
RARA-202ENST00000394081 NAV2Q8IVL1 2488 aa15.38■□□□□ 0.05
RARA-202ENST00000394081 IGLV10-54A0A075B6I4 117 aa15.38■□□□□ 0.05
RARA-202ENST00000394081 UNQ6190/PRO20217Q6UXQ8 127 aa15.38■□□□□ 0.05
RARA-202ENST00000394081 C16orf95Q9H693 158 aa15.38■□□□□ 0.05
RARA-202ENST00000394081 LYRM9A8MSI8 78 aa15.37■□□□□ 0.05
RARA-202ENST00000394081 C10orf25Q5T742 122 aa15.37■□□□□ 0.05
RARA-202ENST00000394081 TLN2Q9Y4G6 2542 aa15.36■□□□□ 0.05
RARA-202ENST00000394081 MIFP14174 115 aa15.36■□□□□ 0.05
RARA-202ENST00000394081 AKAP9Q99996 3911 aa15.36■□□□□ 0.05
RARA-202ENST00000394081 A0A096LPF7 62 aa15.36■□□□□ 0.05
RARA-202ENST00000394081 LINC00336Q6ZUF6 198 aa15.36■□□□□ 0.05
RARA-202ENST00000394081 FP248Q71RG6 208 aaPredicted RBP15.36■□□□□ 0.05
RARA-202ENST00000394081 X6R8D5 127 aa15.36■□□□□ 0.05
RARA-202ENST00000394081 CSMD2Q7Z408 3487 aa15.35■□□□□ 0.05
RARA-202ENST00000394081 TM2D3Q9BRN9 247 aa15.35■□□□□ 0.05
RARA-202ENST00000394081 ESM1Q9NQ30 184 aa15.33■□□□□ 0.05
RARA-202ENST00000394081 COX7BP24311 80 aa15.33■□□□□ 0.04
RARA-202ENST00000394081 ELOF1P60002 83 aaKnown RBP15.33■□□□□ 0.04
RARA-202ENST00000394081 NREPQ16612 68 aa15.33■□□□□ 0.04
RARA-202ENST00000394081 ZNF73O43830 326 aaPredicted RBP15.32■□□□□ 0.04
RARA-202ENST00000394081 NBPF19A0A087WUL8 3843 aa15.3■□□□□ 0.04
RARA-202ENST00000394081 TMEM254Q8TBM7 123 aa15.3■□□□□ 0.04
RARA-202ENST00000394081 TEX15Q9BXT5 2789 aa15.3■□□□□ 0.04
RARA-202ENST00000394081 JMJD1CQ15652 2540 aa15.3■□□□□ 0.04
RARA-202ENST00000394081 BPY2O14599 106 aa15.29■□□□□ 0.04
RARA-202ENST00000394081 FBN2P35556 2912 aa15.28■□□□□ 0.04
RARA-202ENST00000394081 PRR34Q9NV39 138 aa15.27■□□□□ 0.04
RARA-202ENST00000394081 KRTAP10-9P60411 292 aa15.26■□□□□ 0.03
RARA-202ENST00000394081 KRTAP1-3Q8IUG1 177 aa15.26■□□□□ 0.03
RARA-202ENST00000394081 SCXQ7RTU7 201 aa15.24■□□□□ 0.03
RARA-202ENST00000394081 LELP1Q5T871 98 aa15.24■□□□□ 0.03
RARA-202ENST00000394081 CELA1Q9UNI1 258 aa15.24■□□□□ 0.03
RARA-202ENST00000394081 POLQO75417 2590 aa15.23■□□□□ 0.03
RARA-202ENST00000394081 C6orf48Q9UBA6 75 aa15.23■□□□□ 0.03
RARA-202ENST00000394081 IGKV4-1P06312 121 aa15.2■□□□□ 0.02
RARA-202ENST00000394081 OCR1Q9BZK8 76 aa15.2■□□□□ 0.02
RARA-202ENST00000394081 A0A0U1RQV1 116 aa15.19■□□□□ 0.02
RARA-202ENST00000394081 M0R378 163 aa15.18■□□□□ 0.02
RARA-202ENST00000394081 VPREB1P12018 145 aa15.18■□□□□ 0.02
RARA-202ENST00000394081 CENPEQ02224 2701 aa15.18■□□□□ 0.02
RARA-202ENST00000394081 LINC00528Q8N1L1 170 aa15.18■□□□□ 0.02
RARA-202ENST00000394081 PRYO14603 147 aa15.17■□□□□ 0.02
RARA-202ENST00000394081 XAGE1AQ9HD64 81 aa15.17■□□□□ 0.02
RARA-202ENST00000394081 DAD1P61803 113 aa15.17■□□□□ 0.02
RARA-202ENST00000394081 LINC00474Q9P2X8 69 aa15.17■□□□□ 0.02
RARA-202ENST00000394081 NOTCH2Q04721 2471 aa15.14■□□□□ 0.01
RARA-202ENST00000394081 KLK12Q9UKR0 248 aa15.14■□□□□ 0.01
RARA-202ENST00000394081 EGFEM1PQ0D2K5 195 aa15.13■□□□□ 0.01
RARA-202ENST00000394081 A0A1B0GW54 56 aa15.12■□□□□ 0.01
RARA-202ENST00000394081 C1orf43Q9BWL3 253 aa15.12■□□□□ 0.01
RARA-202ENST00000394081 UNC79Q9P2D8 2635 aa15.12■□□□□ 0.01
RARA-202ENST00000394081 FUSP35637 526 aaKnown RBP eCLIP15.1■□□□□ 0.01
RARA-202ENST00000394081 HIGD2BQ4VC39 106 aa15.1■□□□□ 0.01
RARA-202ENST00000394081 WFDC11Q8NEX6 87 aa15.1■□□□□ 0.01
RARA-202ENST00000394081 NIPBLQ6KC79 2804 aaeCLIP15.09■□□□□ 0.01
RARA-202ENST00000394081 ESRGQ1W209 222 aa15.08■□□□□ 0
RARA-202ENST00000394081 ITPR2Q14571 2701 aa15.08■□□□□ 0
RARA-202ENST00000394081 Q6ZTC4 211 aa15.06■□□□□ 0
RARA-202ENST00000394081 Q8N9L7 120 aa15.06■□□□□ 0
RARA-202ENST00000394081 CAMK2N2Q96S95 79 aa15.06■□□□□ 0
RARA-202ENST00000394081 FN1P02751 2386 aaKnown RBP15.06■□□□□ 0
RARA-202ENST00000394081 APOC4P55056 127 aa15.05■□□□□ 0
RARA-202ENST00000394081 DEFB135Q30KP9 77 aa15.04■□□□□ -0
RARA-202ENST00000394081 NF1P21359 2839 aa15.04■□□□□ -0
RARA-202ENST00000394081 DEFB4AO15263 64 aa15.03■□□□□ -0
RARA-202ENST00000394081 IGLV5-48A0A075B6I7 105 aa15.03■□□□□ -0
RARA-202ENST00000394081 LCE6AA0A183 80 aa15.03■□□□□ -0
RARA-202ENST00000394081 FAM229BQ4G0N7 80 aa15.03■□□□□ -0
RARA-202ENST00000394081 SPART-AS1P0CW21 52 aa15.02□□□□□ -0.01
RARA-202ENST00000394081 Q8NAQ8 132 aa15.02□□□□□ -0.01
RARA-202ENST00000394081 BRK1Q8WUW1 75 aa15.01□□□□□ -0.01
RARA-202ENST00000394081 SONP18583 2426 aaKnown RBP15.01□□□□□ -0.01
RARA-202ENST00000394081 F8WDY8 70 aa15□□□□□ -0.01
RARA-202ENST00000394081 KRTAP1-1Q07627 177 aa14.97□□□□□ -0.01
RARA-202ENST00000394081 HIGD2AQ9BW72 106 aa14.97□□□□□ -0.01
RARA-202ENST00000394081 ABCA12Q86UK0 2595 aa14.97□□□□□ -0.01
RARA-202ENST00000394081 Q6ZRU5 148 aa14.97□□□□□ -0.01
RARA-202ENST00000394081 KCNQ1DNQ9H478 68 aa14.97□□□□□ -0.01
RARA-202ENST00000394081 ITPR3Q14573 2671 aa14.97□□□□□ -0.01
RARA-202ENST00000394081 KRTAP26-1Q6PEX3 210 aa14.96□□□□□ -0.01
RARA-202ENST00000394081 PKIGQ9Y2B9 76 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms