RNA–Protein interactions for RNA: ENST00000391248.1

RNU1-78P-201, Transcript of RNA, U1 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU1-78P, Length 165 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-78P-201ENST00000391248 LINC00032P0C843 101 aa0.77□□□□□ -2.29
RNU1-78P-201ENST00000391248 DCDP81605 110 aaKnown RBP0.77□□□□□ -2.29
RNU1-78P-201ENST00000391248 LINC00299Q6ZSB3 139 aa0.77□□□□□ -2.29
RNU1-78P-201ENST00000391248 COA5Q86WW8 74 aa0.77□□□□□ -2.29
RNU1-78P-201ENST00000391248 DMAC1Q96GE9 116 aa0.77□□□□□ -2.29
RNU1-78P-201ENST00000391248 KRTAP4-11Q9BYQ6 195 aa0.77□□□□□ -2.29
RNU1-78P-201ENST00000391248 KRTAP4-9Q9BYQ8 210 aa0.77□□□□□ -2.29
RNU1-78P-201ENST00000391248 WFDC10AQ9H1F0 79 aa0.77□□□□□ -2.29
RNU1-78P-201ENST00000391248 NPVFQ9HCQ7 196 aa0.77□□□□□ -2.29
RNU1-78P-201ENST00000391248 C22orf24Q9Y442 160 aa0.77□□□□□ -2.29
RNU1-78P-201ENST00000391248 HEATR5BQ9P2D3 2071 aa0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 PIGBOS1A0A0B4J2F0 54 aa0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 A0A0G2JND7 137 aa0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 IGKV2-29A2NJV5 120 aaPredicted RBP0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 CLPSL1A2RUU4 121 aa0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 A6NIN4 97 aa0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 H3BQ15 152 aa0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 ATOX1O00244 68 aa0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 IGKV1-17P01599 117 aa0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 IGHV3-33P01772 117 aa0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 APOC3P02656 99 aa0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 NMBP08949 121 aa0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 TRAPPC2P0DI81 140 aa0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 TRAPPC2BP0DI82 140 aa0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 FAUP35544 74 aaKnown RBP0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 KRTAP10-6P60371 365 aaPredicted RBP0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 KRTAP10-8P60410 259 aa0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 CNBPP62633 177 aaKnown RBP0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 SEC11AP67812 179 aa0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 PEA15Q15121 130 aa0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 LCE3EQ5T5B0 92 aa0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 SFTA2Q6UW10 78 aa0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 BRD3OSQ6XYD6 125 aa0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 Q6ZRN7 208 aaPredicted RBP0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 MYOZ3Q8TDC0 251 aa0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 LCN9Q8WX39 176 aa0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 C20orf78Q9BR46 151 aa0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 MANBALQ9NQG1 85 aa0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 MRPL36Q9P0J6 103 aaKnown RBP0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 HEATR1Q9H583 2144 aaKnown RBP0.76□□□□□ -2.29
RNU1-78P-201ENST00000391248 MUC2Q02817 5179 aa0.75□□□□□ -2.29
RNU1-78P-201ENST00000391248 HMCN2Q8NDA2 5059 aa0.75□□□□□ -2.29
RNU1-78P-201ENST00000391248 WNK1Q9H4A3 2382 aa0.75□□□□□ -2.29
RNU1-78P-201ENST00000391248 TRBV6-7A0A0A0MS04 114 aa0.75□□□□□ -2.29
RNU1-78P-201ENST00000391248 TRBV7-7A0A0K0K1E9 115 aa0.75□□□□□ -2.29
RNU1-78P-201ENST00000391248 LOC101927531A0A1B0GV80 90 aa0.75□□□□□ -2.29
RNU1-78P-201ENST00000391248 SYS1-DBNDD2H3BUS1 97 aa0.75□□□□□ -2.29
RNU1-78P-201ENST00000391248 FXYD1O00168 92 aa0.75□□□□□ -2.29
RNU1-78P-201ENST00000391248 SFT2D2O95562 160 aa0.75□□□□□ -2.29
RNU1-78P-201ENST00000391248 CYB5AP00167 134 aa0.75□□□□□ -2.29
RNU1-78P-201ENST00000391248 ASIPP42127 132 aa0.75□□□□□ -2.29
RNU1-78P-201ENST00000391248 UBE2D3P61077 147 aa0.75□□□□□ -2.29
RNU1-78P-201ENST00000391248 UBE2D2P62837 147 aa0.75□□□□□ -2.29
RNU1-78P-201ENST00000391248 CCL8P80075 99 aa0.75□□□□□ -2.29
RNU1-78P-201ENST00000391248 MPV17LQ2QL34 196 aa0.75□□□□□ -2.29
RNU1-78P-201ENST00000391248 Q5VV11 94 aa0.75□□□□□ -2.29
RNU1-78P-201ENST00000391248 C20orf197Q8N268 126 aa0.75□□□□□ -2.29
RNU1-78P-201ENST00000391248 C4orf3Q8WVX3 66 aa0.75□□□□□ -2.29
RNU1-78P-201ENST00000391248 AMELYQ99218 206 aa0.75□□□□□ -2.29
RNU1-78P-201ENST00000391248 KRTAP4-7Q9BYR0 210 aa0.75□□□□□ -2.29
RNU1-78P-201ENST00000391248 BET1LQ9NYM9 111 aa0.75□□□□□ -2.29
RNU1-78P-201ENST00000391248 EXPH5Q8NEV8 1989 aa0.75□□□□□ -2.29
RNU1-78P-201ENST00000391248 LPAP08519 4548 aa0.75□□□□□ -2.29
RNU1-78P-201ENST00000391248 FREM1Q5H8C1 2179 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 LRP1BQ9NZR2 4599 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 LRP1Q07954 4544 aaKnown RBP0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 FAT4Q6V0I7 4981 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 NOTCH3Q9UM47 2321 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 IGKV3D-7A0A0C4DH55 119 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 IGKV3OR2-268A0A0C4DH90 116 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 A0A0J9YY99 117 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 NBDYA0A0U1RRE5 68 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 SPRR5A0A1B0GTR4 108 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 GYPAP02724 150 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 PRB2P02812 416 aaPredicted RBP0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 CCL3L1P16619 93 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 PDE6GP18545 87 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 EDDM3BP56851 147 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 KRTAP10-3P60369 221 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 KRTDAPP60985 99 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 FXYD3Q14802 87 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 ZNF56Q15929 161 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 C10orf128Q5T292 105 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 LINC00322Q6ZN03 302 aaPredicted RBP0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 ZNF818PQ6ZRF7 136 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 NDUFA11Q86Y39 141 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 Q8N6K4 173 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 ZNF625Q96I27 306 aaPredicted RBP0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 OBSCN-AS1Q96MR7 158 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 CYP4F30PQ9H0H9 118 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 NDUFA4L2Q9NRX3 87 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 CACFD1Q9UGQ2 172 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 ABCA1O95477 2261 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 CADP27708 2225 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 VPS13BQ7Z7G8 4022 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 KIAA2026Q5HYC2 2103 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 MED12LQ86YW9 2145 aa0.74□□□□□ -2.29
RNU1-78P-201ENST00000391248 DNAJC13O75165 2243 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 ALPK2Q86TB3 2170 aa0.73□□□□□ -2.29
RNU1-78P-201ENST00000391248 TNXBP22105 4242 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms