RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 IGLV4-60A0A075B6I1 120 aa13.32□□□□□ -0.28
CSPG5-202ENST00000383738 UBE2BP63146 152 aa13.31□□□□□ -0.28
CSPG5-202ENST00000383738 Q6ZQY7 126 aa13.31□□□□□ -0.28
CSPG5-202ENST00000383738 RMI2Q96E14 147 aa13.3□□□□□ -0.28
CSPG5-202ENST00000383738 NREPQ16612 68 aa13.3□□□□□ -0.28
CSPG5-202ENST00000383738 CELA1Q9UNI1 258 aa13.28□□□□□ -0.28
CSPG5-202ENST00000383738 FHL2Q14192 279 aa13.28□□□□□ -0.28
CSPG5-202ENST00000383738 IBA57-AS1B1ANH7 110 aa13.28□□□□□ -0.28
CSPG5-202ENST00000383738 F8WEM9 126 aa13.27□□□□□ -0.29
CSPG5-202ENST00000383738 LITAFQ99732 161 aa13.26□□□□□ -0.29
CSPG5-202ENST00000383738 C3orf84H3BNL1 204 aa13.26□□□□□ -0.29
CSPG5-202ENST00000383738 BEAN1Q3B7T3 259 aa13.25□□□□□ -0.29
CSPG5-202ENST00000383738 RPL28P46779 137 aaKnown RBP13.24□□□□□ -0.29
CSPG5-202ENST00000383738 Q6JHZ5 121 aa13.24□□□□□ -0.29
CSPG5-202ENST00000383738 KRTAP1-1Q07627 177 aa13.24□□□□□ -0.29
CSPG5-202ENST00000383738 C11orf72Q8NBR9 251 aa13.24□□□□□ -0.29
CSPG5-202ENST00000383738 KMT2BQ9UMN6 2715 aaPredicted RBP13.23□□□□□ -0.29
CSPG5-202ENST00000383738 LINC00959A0A1B0GUT2 108 aa13.23□□□□□ -0.29
CSPG5-202ENST00000383738 KRTAP10-3P60369 221 aa13.22□□□□□ -0.29
CSPG5-202ENST00000383738 CR1P17927 2039 aa13.21□□□□□ -0.3
CSPG5-202ENST00000383738 TRAV10A0A0B4J240 114 aa13.21□□□□□ -0.3
CSPG5-202ENST00000383738 SPATA3Q8NHX4 192 aa13.2□□□□□ -0.3
CSPG5-202ENST00000383738 DIRC1Q969H9 104 aa13.2□□□□□ -0.3
CSPG5-202ENST00000383738 NDUFC2O95298 119 aa13.19□□□□□ -0.3
CSPG5-202ENST00000383738 CCKP06307 115 aa13.18□□□□□ -0.3
CSPG5-202ENST00000383738 NTM-AS1Q6ZSK4 140 aa13.18□□□□□ -0.3
CSPG5-202ENST00000383738 FAM19A4Q96LR4 140 aa13.18□□□□□ -0.3
CSPG5-202ENST00000383738 MXRA5Q9NR99 2828 aa13.18□□□□□ -0.3
CSPG5-202ENST00000383738 WFDC10BQ8IUB3 73 aa13.17□□□□□ -0.3
CSPG5-202ENST00000383738 Q8N3U1 123 aa13.17□□□□□ -0.3
CSPG5-202ENST00000383738 Q8N9L7 120 aa13.16□□□□□ -0.3
CSPG5-202ENST00000383738 LELP1Q5T871 98 aa13.16□□□□□ -0.3
CSPG5-202ENST00000383738 CSMD1Q96PZ7 3565 aa13.15□□□□□ -0.3
CSPG5-202ENST00000383738 BPY2O14599 106 aa13.14□□□□□ -0.31
CSPG5-202ENST00000383738 LY6G6CO95867 125 aa13.14□□□□□ -0.31
CSPG5-202ENST00000383738 Q8N814 137 aa13.14□□□□□ -0.31
CSPG5-202ENST00000383738 CUBNO60494 3623 aa13.14□□□□□ -0.31
CSPG5-202ENST00000383738 CELSR1Q9NYQ6 3014 aa13.14□□□□□ -0.31
CSPG5-202ENST00000383738 C9orf129Q5T035 196 aaKnown RBP13.13□□□□□ -0.31
CSPG5-202ENST00000383738 UNQ6190/PRO20217Q6UXQ8 127 aa13.13□□□□□ -0.31
CSPG5-202ENST00000383738 A0A096LNI7 61 aa13.13□□□□□ -0.31
CSPG5-202ENST00000383738 ETDCA0A1B0GVM5 59 aa13.13□□□□□ -0.31
CSPG5-202ENST00000383738 CRYGAP11844 174 aa13.12□□□□□ -0.31
CSPG5-202ENST00000383738 COX7BP24311 80 aa13.12□□□□□ -0.31
CSPG5-202ENST00000383738 TENM4Q6N022 2769 aa13.12□□□□□ -0.31
CSPG5-202ENST00000383738 IGLV5-39A0A0G2JS06 123 aa13.11□□□□□ -0.31
CSPG5-202ENST00000383738 FUSP35637 526 aaKnown RBP eCLIP13.11□□□□□ -0.31
CSPG5-202ENST00000383738 CD164L2Q6UWJ8 174 aa13.11□□□□□ -0.31
CSPG5-202ENST00000383738 X6R8D5 127 aa13.1□□□□□ -0.31
CSPG5-202ENST00000383738 IGKV2-28A0A075B6P5 120 aa13.1□□□□□ -0.31
CSPG5-202ENST00000383738 IGKV2D-28P01615 120 aa13.1□□□□□ -0.31
CSPG5-202ENST00000383738 ATP5EP2Q5VTU8 51 aa13.1□□□□□ -0.31
CSPG5-202ENST00000383738 NDUFC2-KCTD14E9PQ53 114 aa13.09□□□□□ -0.31
CSPG5-202ENST00000383738 C6orf223Q8N319 242 aa13.09□□□□□ -0.31
CSPG5-202ENST00000383738 CYSRT1A8MQ03 144 aa13.08□□□□□ -0.32
CSPG5-202ENST00000383738 SPTSSBQ8NFR3 76 aa13.07□□□□□ -0.32
CSPG5-202ENST00000383738 HIGD2AQ9BW72 106 aa13.07□□□□□ -0.32
CSPG5-202ENST00000383738 SYCNQ0VAF6 134 aa13.07□□□□□ -0.32
CSPG5-202ENST00000383738 A0A087WZ39 114 aa13.05□□□□□ -0.32
CSPG5-202ENST00000383738 KLK9Q2XQG4 91 aa13.05□□□□□ -0.32
CSPG5-202ENST00000383738 SVEP1Q4LDE5 3571 aa13.05□□□□□ -0.32
CSPG5-202ENST00000383738 LINC01561Q8N1V8 128 aa13.04□□□□□ -0.32
CSPG5-202ENST00000383738 FAM30AQ9NZY2 134 aa13.04□□□□□ -0.32
CSPG5-202ENST00000383738 LYPD5Q6UWN5 251 aa13.04□□□□□ -0.32
CSPG5-202ENST00000383738 TRAV7A0A075B6U4 112 aa13.03□□□□□ -0.32
CSPG5-202ENST00000383738 SMIM26A0A096LP01 95 aa13.02□□□□□ -0.32
CSPG5-202ENST00000383738 RPL37AP8A6NKH3 93 aa13.02□□□□□ -0.32
CSPG5-202ENST00000383738 Q6ZVQ6 151 aa13.02□□□□□ -0.32
CSPG5-202ENST00000383738 TRBV10-3A0A0K0K1G6 114 aa13.01□□□□□ -0.33
CSPG5-202ENST00000383738 LINC01547P58512 204 aaPredicted RBP13□□□□□ -0.33
CSPG5-202ENST00000383738 IGHV3OR16-9A0A0B4J2B5 98 aa13□□□□□ -0.33
CSPG5-202ENST00000383738 STAB2Q8WWQ8 2551 aa13□□□□□ -0.33
CSPG5-202ENST00000383738 C1orf195Q5TG92 126 aa13□□□□□ -0.33
CSPG5-202ENST00000383738 V9GYY9 64 aa13□□□□□ -0.33
CSPG5-202ENST00000383738 SERP1Q9Y6X1 66 aa12.99□□□□□ -0.33
CSPG5-202ENST00000383738 FAM19A3Q7Z5A8 133 aa12.99□□□□□ -0.33
CSPG5-202ENST00000383738 KRTAP10-11P60412 298 aa12.99□□□□□ -0.33
CSPG5-202ENST00000383738 GIG44P09565 113 aaPredicted RBP12.98□□□□□ -0.33
CSPG5-202ENST00000383738 PDE6GP18545 87 aa12.98□□□□□ -0.33
CSPG5-202ENST00000383738 ESRGQ1W209 222 aa12.98□□□□□ -0.33
CSPG5-202ENST00000383738 PSPHP1O15172 72 aa12.97□□□□□ -0.33
CSPG5-202ENST00000383738 UBE2AP49459 152 aa12.97□□□□□ -0.33
CSPG5-202ENST00000383738 Q8IZM0 81 aa12.97□□□□□ -0.33
CSPG5-202ENST00000383738 IGLV5-45A0A087WSX0 123 aa12.96□□□□□ -0.33
CSPG5-202ENST00000383738 CYSTM1Q9H1C7 97 aa12.96□□□□□ -0.34
CSPG5-202ENST00000383738 WFDC13Q8IUB5 93 aa12.95□□□□□ -0.34
CSPG5-202ENST00000383738 C19orf73Q9NVV2 129 aa12.95□□□□□ -0.34
CSPG5-202ENST00000383738 ZNF73O43830 326 aaPredicted RBP12.95□□□□□ -0.34
CSPG5-202ENST00000383738 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.95□□□□□ -0.34
CSPG5-202ENST00000383738 TRBV7-6A0A0J9YX20 115 aa12.94□□□□□ -0.34
CSPG5-202ENST00000383738 Q8NAQ8 132 aa12.94□□□□□ -0.34
CSPG5-202ENST00000383738 IL17DQ8TAD2 202 aa12.94□□□□□ -0.34
CSPG5-202ENST00000383738 MDFIQ99750 246 aa12.92□□□□□ -0.34
CSPG5-202ENST00000383738 TM2D3Q9BRN9 247 aa12.92□□□□□ -0.34
CSPG5-202ENST00000383738 NDUFS5O43920 106 aa12.91□□□□□ -0.34
CSPG5-202ENST00000383738 TMEM254Q8TBM7 123 aa12.91□□□□□ -0.34
CSPG5-202ENST00000383738 LINC00474Q9P2X8 69 aa12.91□□□□□ -0.34
CSPG5-202ENST00000383738 RPS28P62857 69 aaKnown RBP12.91□□□□□ -0.34
CSPG5-202ENST00000383738 DEFB116Q30KQ4 102 aa12.9□□□□□ -0.34
CSPG5-202ENST00000383738 CSNK1G2-AS1Q8NCQ2 148 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms