RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 SERTAD4-AS1Q5TG53 156 aa10.09□□□□□ -0.79
SNRPB-201ENST00000381342 MYMXA0A1B0GTQ4 84 aa10.08□□□□□ -0.8
SNRPB-201ENST00000381342 E9PLD3 99 aa10.08□□□□□ -0.8
SNRPB-201ENST00000381342 M0QXV9 152 aa10.08□□□□□ -0.8
SNRPB-201ENST00000381342 LGALS3P17931 250 aaKnown RBP10.08□□□□□ -0.8
SNRPB-201ENST00000381342 A0A0U1RRA0 63 aa10.07□□□□□ -0.8
SNRPB-201ENST00000381342 OXTP01178 125 aa10.07□□□□□ -0.8
SNRPB-201ENST00000381342 HERV-K104P63124 156 aa10.07□□□□□ -0.8
SNRPB-201ENST00000381342 COX17Q14061 63 aa10.07□□□□□ -0.8
SNRPB-201ENST00000381342 MEIG1Q5JSS6 88 aa10.07□□□□□ -0.8
SNRPB-201ENST00000381342 SMIM13P0DJ93 91 aa10.06□□□□□ -0.8
SNRPB-201ENST00000381342 LINC00158P58513 81 aa10.06□□□□□ -0.8
SNRPB-201ENST00000381342 SPATA45Q537H7 98 aa10.06□□□□□ -0.8
SNRPB-201ENST00000381342 ANKRD39Q53RE8 183 aa10.06□□□□□ -0.8
SNRPB-201ENST00000381342 SND1-IT1Q9HBX3 110 aa10.06□□□□□ -0.8
SNRPB-201ENST00000381342 PAM16Q9Y3D7 125 aa10.06□□□□□ -0.8
SNRPB-201ENST00000381342 DMBT1Q9UGM3 2413 aaPredicted RBP10.06□□□□□ -0.8
SNRPB-201ENST00000381342 PKHD1L1Q86WI1 4243 aa10.05□□□□□ -0.8
SNRPB-201ENST00000381342 NMUP48645 174 aa10.05□□□□□ -0.8
SNRPB-201ENST00000381342 PRR3P79522 188 aaKnown RBP10.05□□□□□ -0.8
SNRPB-201ENST00000381342 IGKV2D-26A0A0A0MRZ7 120 aa10.04□□□□□ -0.8
SNRPB-201ENST00000381342 HNRNPA3P51991 378 aaKnown RBP10.03□□□□□ -0.8
SNRPB-201ENST00000381342 KRTAP11-1Q8IUC1 163 aa10.03□□□□□ -0.8
SNRPB-201ENST00000381342 PLA2G2DQ9UNK4 145 aa10.02□□□□□ -0.81
SNRPB-201ENST00000381342 C22orf24Q9Y442 160 aa10.02□□□□□ -0.81
SNRPB-201ENST00000381342 UBE2BP63146 152 aa10.01□□□□□ -0.81
SNRPB-201ENST00000381342 MIR7-3HGQ8N6C7 128 aa10.01□□□□□ -0.81
SNRPB-201ENST00000381342 TTTY13Q9BZ97 58 aa10.01□□□□□ -0.81
SNRPB-201ENST00000381342 PSORS1C2Q9UIG4 136 aa10.01□□□□□ -0.81
SNRPB-201ENST00000381342 DAND5Q8N907 189 aa10□□□□□ -0.81
SNRPB-201ENST00000381342 Q8NDZ9 215 aa10□□□□□ -0.81
SNRPB-201ENST00000381342 IGLV5-37A0A075B6J1 123 aa9.99□□□□□ -0.81
SNRPB-201ENST00000381342 A0A0J9YXY3 114 aa9.99□□□□□ -0.81
SNRPB-201ENST00000381342 LINC00587B1AMM8 73 aa9.99□□□□□ -0.81
SNRPB-201ENST00000381342 COX8AP10176 69 aa9.99□□□□□ -0.81
SNRPB-201ENST00000381342 VPREB1P12018 145 aa9.99□□□□□ -0.81
SNRPB-201ENST00000381342 MRPL55Q7Z7F7 128 aaKnown RBP9.99□□□□□ -0.81
SNRPB-201ENST00000381342 NKAPP1Q8N9T2 125 aa9.99□□□□□ -0.81
SNRPB-201ENST00000381342 TP73-AS1Q9UF72 201 aa9.99□□□□□ -0.81
SNRPB-201ENST00000381342 GAGE10A6NGK3 116 aa9.98□□□□□ -0.81
SNRPB-201ENST00000381342 ZNF815PA8K554 130 aa9.98□□□□□ -0.81
SNRPB-201ENST00000381342 DLEU1O43261 78 aa9.97□□□□□ -0.81
SNRPB-201ENST00000381342 LBHQ53QV2 105 aaPredicted RBP9.97□□□□□ -0.81
SNRPB-201ENST00000381342 MYCBP2O75592 4640 aa9.97□□□□□ -0.81
SNRPB-201ENST00000381342 TSTD3H0UI37 97 aa9.96□□□□□ -0.82
SNRPB-201ENST00000381342 C1orf137Q5JT78 98 aa9.96□□□□□ -0.82
SNRPB-201ENST00000381342 SLC25A34Q6PIV7 304 aa9.96□□□□□ -0.82
SNRPB-201ENST00000381342 PCP2Q8IVA1 136 aa9.96□□□□□ -0.82
SNRPB-201ENST00000381342 BOD1L2Q8IYS8 172 aa9.96□□□□□ -0.82
SNRPB-201ENST00000381342 C14orf144Q96I85 54 aa9.96□□□□□ -0.82
SNRPB-201ENST00000381342 LINC00167Q96N53 147 aa9.96□□□□□ -0.82
SNRPB-201ENST00000381342 RPL37AP8A6NKH3 93 aa9.95□□□□□ -0.82
SNRPB-201ENST00000381342 RPL24P83731 157 aaKnown RBP9.95□□□□□ -0.82
SNRPB-201ENST00000381342 UQCR10Q9UDW1 63 aa9.95□□□□□ -0.82
SNRPB-201ENST00000381342 PRO1933Q9H354 126 aa9.94□□□□□ -0.82
SNRPB-201ENST00000381342 NPC2P61916 151 aa9.93□□□□□ -0.82
SNRPB-201ENST00000381342 ADAMTSL4-AS1Q5T5F5 129 aa9.93□□□□□ -0.82
SNRPB-201ENST00000381342 LITAFQ99732 161 aa9.93□□□□□ -0.82
SNRPB-201ENST00000381342 MIEN1Q9BRT3 115 aa9.93□□□□□ -0.82
SNRPB-201ENST00000381342 IGKV2-28A0A075B6P5 120 aa9.92□□□□□ -0.82
SNRPB-201ENST00000381342 NCR3O14931 201 aa9.92□□□□□ -0.82
SNRPB-201ENST00000381342 IGKV2D-28P01615 120 aa9.92□□□□□ -0.82
SNRPB-201ENST00000381342 EIF4EBP3O60516 100 aaPredicted RBP9.9□□□□□ -0.82
SNRPB-201ENST00000381342 TIMM17BO60830 172 aa9.9□□□□□ -0.82
SNRPB-201ENST00000381342 IGLV7-43P04211 117 aa9.9□□□□□ -0.82
SNRPB-201ENST00000381342 SOSTDC1Q6X4U4 206 aa9.9□□□□□ -0.82
SNRPB-201ENST00000381342 HERC1Q15751 4861 aa9.89□□□□□ -0.83
SNRPB-201ENST00000381342 FAT3Q8TDW7 4589 aa9.89□□□□□ -0.83
SNRPB-201ENST00000381342 LOC107984156A0A0G2JMH3 177 aa9.89□□□□□ -0.83
SNRPB-201ENST00000381342 SCGB1D4Q6XE38 83 aa9.89□□□□□ -0.83
SNRPB-201ENST00000381342 ARL17AQ8IVW1 177 aa9.89□□□□□ -0.83
SNRPB-201ENST00000381342 M0R378 163 aa9.88□□□□□ -0.83
SNRPB-201ENST00000381342 SPINK6Q6UWN8 80 aa9.88□□□□□ -0.83
SNRPB-201ENST00000381342 HIGD1BQ9P298 99 aa9.88□□□□□ -0.83
SNRPB-201ENST00000381342 LRP1Q07954 4544 aaKnown RBP9.88□□□□□ -0.83
SNRPB-201ENST00000381342 IGLV1-50A0A075B6I6 118 aa9.87□□□□□ -0.83
SNRPB-201ENST00000381342 SRSF9Q13242 221 aaKnown RBP eCLIP9.87□□□□□ -0.83
SNRPB-201ENST00000381342 REG3GQ6UW15 175 aa9.87□□□□□ -0.83
SNRPB-201ENST00000381342 C2orf91Q6ZV80 131 aa9.87□□□□□ -0.83
SNRPB-201ENST00000381342 LINC00308Q8TCZ7 52 aa9.86□□□□□ -0.83
SNRPB-201ENST00000381342 TMEM238C9JI98 176 aa9.85□□□□□ -0.83
SNRPB-201ENST00000381342 BCE1O60756 84 aa9.85□□□□□ -0.83
SNRPB-201ENST00000381342 DDTP30046 118 aa9.85□□□□□ -0.83
SNRPB-201ENST00000381342 SPANXDQ9BXN6 97 aa9.84□□□□□ -0.83
SNRPB-201ENST00000381342 SPANXB1Q9NS25 103 aaPredicted RBP9.84□□□□□ -0.83
SNRPB-201ENST00000381342 SPANXCQ9NY87 97 aa9.84□□□□□ -0.83
SNRPB-201ENST00000381342 NDUFC2O95298 119 aa9.83□□□□□ -0.84
SNRPB-201ENST00000381342 TMEM126AQ9H061 195 aa9.83□□□□□ -0.84
SNRPB-201ENST00000381342 TRBV10-3A0A0K0K1G6 114 aa9.82□□□□□ -0.84
SNRPB-201ENST00000381342 TRBV10-2A0A0K0K1G8 114 aa9.81□□□□□ -0.84
SNRPB-201ENST00000381342 H0Y9J4 135 aa9.8□□□□□ -0.84
SNRPB-201ENST00000381342 ZNF861PO60384 105 aa9.8□□□□□ -0.84
SNRPB-201ENST00000381342 TAL2Q16559 108 aa9.8□□□□□ -0.84
SNRPB-201ENST00000381342 Q6ZVH6 145 aa9.8□□□□□ -0.84
SNRPB-201ENST00000381342 DIRC1Q969H9 104 aa9.8□□□□□ -0.84
SNRPB-201ENST00000381342 LINC01600Q96MT4 127 aa9.8□□□□□ -0.84
SNRPB-201ENST00000381342 PRYO14603 147 aa9.79□□□□□ -0.84
SNRPB-201ENST00000381342 RPL28P46779 137 aaKnown RBP9.79□□□□□ -0.84
SNRPB-201ENST00000381342 UBE2AP49459 152 aa9.79□□□□□ -0.84
SNRPB-201ENST00000381342 HSD52Q0P140 79 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms