RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 FABP9Q0Z7S8 132 aa13.23□□□□□ -0.29
U2AF1-202ENST00000380276 COX17Q14061 63 aa13.23□□□□□ -0.29
U2AF1-202ENST00000380276 Q8NDZ9 215 aa13.23□□□□□ -0.29
U2AF1-202ENST00000380276 SPAG11AQ6PDA7 123 aa13.22□□□□□ -0.29
U2AF1-202ENST00000380276 LINC00158P58513 81 aa13.19□□□□□ -0.3
U2AF1-202ENST00000380276 TMEM170BQ5T4T1 132 aa13.19□□□□□ -0.3
U2AF1-202ENST00000380276 LINC00337Q8N6G1 96 aa13.19□□□□□ -0.3
U2AF1-202ENST00000380276 SPRR4Q96PI1 79 aa13.19□□□□□ -0.3
U2AF1-202ENST00000380276 COX19Q49B96 90 aa13.18□□□□□ -0.3
U2AF1-202ENST00000380276 A0A0U1RRA0 63 aa13.17□□□□□ -0.3
U2AF1-202ENST00000380276 ZNF706Q9Y5V0 76 aaPredicted RBP13.17□□□□□ -0.3
U2AF1-202ENST00000380276 TMEM218A2RU14 115 aa13.16□□□□□ -0.3
U2AF1-202ENST00000380276 SFTA2Q6UW10 78 aa13.16□□□□□ -0.3
U2AF1-202ENST00000380276 FP248Q71RG6 208 aaPredicted RBP13.16□□□□□ -0.3
U2AF1-202ENST00000380276 DAND5Q8N907 189 aa13.16□□□□□ -0.3
U2AF1-202ENST00000380276 C11orf86A6NJI1 115 aa13.15□□□□□ -0.3
U2AF1-202ENST00000380276 PMCHL1Q16048 86 aa13.15□□□□□ -0.3
U2AF1-202ENST00000380276 CLLU1Q5K131 121 aa13.15□□□□□ -0.3
U2AF1-202ENST00000380276 A0A096LNJ9 63 aa13.14□□□□□ -0.31
U2AF1-202ENST00000380276 HBDP02042 147 aa13.14□□□□□ -0.31
U2AF1-202ENST00000380276 BAGE3Q86Y29 109 aa13.14□□□□□ -0.31
U2AF1-202ENST00000380276 Q8NBF4 154 aa13.14□□□□□ -0.31
U2AF1-202ENST00000380276 UQCC3Q6UW78 93 aa13.13□□□□□ -0.31
U2AF1-202ENST00000380276 ATP6V1G1O75348 118 aa13.12□□□□□ -0.31
U2AF1-202ENST00000380276 LINC00614P0C842 121 aa13.11□□□□□ -0.31
U2AF1-202ENST00000380276 NCR3O14931 201 aa13.1□□□□□ -0.31
U2AF1-202ENST00000380276 SEC11CQ9BY50 192 aa13.1□□□□□ -0.31
U2AF1-202ENST00000380276 URB1-AS1Q96HZ7 61 aa13.09□□□□□ -0.31
U2AF1-202ENST00000380276 PRYO14603 147 aa13.08□□□□□ -0.32
U2AF1-202ENST00000380276 ETDCA0A1B0GVM5 59 aa13.07□□□□□ -0.32
U2AF1-202ENST00000380276 LINC01547P58512 204 aaPredicted RBP13.07□□□□□ -0.32
U2AF1-202ENST00000380276 KRTAP13-3Q3SY46 172 aa13.07□□□□□ -0.32
U2AF1-202ENST00000380276 MEIG1Q5JSS6 88 aa13.07□□□□□ -0.32
U2AF1-202ENST00000380276 BOD1L2Q8IYS8 172 aa13.07□□□□□ -0.32
U2AF1-202ENST00000380276 C18orf32Q8TCD1 76 aa13.07□□□□□ -0.32
U2AF1-202ENST00000380276 SMCR5Q8TEV8 140 aa13.07□□□□□ -0.32
U2AF1-202ENST00000380276 CHTOPQ9Y3Y2 248 aaKnown RBP13.07□□□□□ -0.32
U2AF1-202ENST00000380276 RPS10P5Q9NQ39 176 aa13.06□□□□□ -0.32
U2AF1-202ENST00000380276 TRAPPC1Q9Y5R8 145 aa13.06□□□□□ -0.32
U2AF1-202ENST00000380276 SMIM13P0DJ93 91 aa13.05□□□□□ -0.32
U2AF1-202ENST00000380276 LORP23490 312 aaPredicted RBP13.05□□□□□ -0.32
U2AF1-202ENST00000380276 SPINK1P00995 79 aa13.03□□□□□ -0.32
U2AF1-202ENST00000380276 ASB16-AS1Q495Z4 193 aa13.03□□□□□ -0.32
U2AF1-202ENST00000380276 NDUFA12Q9UI09 145 aa13.02□□□□□ -0.33
U2AF1-202ENST00000380276 TMEM223A0PJW6 202 aa13.01□□□□□ -0.33
U2AF1-202ENST00000380276 SEC61BP60468 96 aaKnown RBP13.01□□□□□ -0.33
U2AF1-202ENST00000380276 GAGE2AQ6NT46 116 aa13.01□□□□□ -0.33
U2AF1-202ENST00000380276 MIR7-3HGQ8N6C7 128 aa13.01□□□□□ -0.33
U2AF1-202ENST00000380276 IGLV9-49A0A0B4J1Y8 123 aa13□□□□□ -0.33
U2AF1-202ENST00000380276 S100A12P80511 92 aa12.99□□□□□ -0.33
U2AF1-202ENST00000380276 MOBPQ13875 183 aa12.99□□□□□ -0.33
U2AF1-202ENST00000380276 RHEBQ15382 184 aa12.99□□□□□ -0.33
U2AF1-202ENST00000380276 KCNQ1DNQ9H478 68 aa12.99□□□□□ -0.33
U2AF1-202ENST00000380276 SPRR1AP35321 89 aa12.98□□□□□ -0.33
U2AF1-202ENST00000380276 TRBV10-3A0A0K0K1G6 114 aa12.97□□□□□ -0.33
U2AF1-202ENST00000380276 COMMD7Q86VX2 200 aa12.97□□□□□ -0.33
U2AF1-202ENST00000380276 KRTAP4-1Q9BYQ7 146 aa12.96□□□□□ -0.33
U2AF1-202ENST00000380276 LINC00483Q53H64 154 aa12.95□□□□□ -0.34
U2AF1-202ENST00000380276 HERV-K104P63124 156 aa12.94□□□□□ -0.34
U2AF1-202ENST00000380276 FAM19A2Q8N3H0 131 aa12.94□□□□□ -0.34
U2AF1-202ENST00000380276 KRTAP4-16G5E9R7 235 aaPredicted RBP12.93□□□□□ -0.34
U2AF1-202ENST00000380276 IFI27L1Q96BM0 104 aa12.93□□□□□ -0.34
U2AF1-202ENST00000380276 TRAV12-1A0A0B4J245 112 aa12.92□□□□□ -0.34
U2AF1-202ENST00000380276 GHRHP01286 108 aa12.92□□□□□ -0.34
U2AF1-202ENST00000380276 MAP1LC3CQ9BXW4 147 aa12.92□□□□□ -0.34
U2AF1-202ENST00000380276 LINC00587B1AMM8 73 aa12.91□□□□□ -0.34
U2AF1-202ENST00000380276 B5MCH6 92 aa12.9□□□□□ -0.34
U2AF1-202ENST00000380276 ERC2-IT1O76042 136 aa12.9□□□□□ -0.34
U2AF1-202ENST00000380276 IFITM2Q01629 132 aa12.9□□□□□ -0.34
U2AF1-202ENST00000380276 Q8N377 158 aa12.9□□□□□ -0.34
U2AF1-202ENST00000380276 MYMXA0A1B0GTQ4 84 aa12.89□□□□□ -0.35
U2AF1-202ENST00000380276 SSBP3-AS1Q7Z2R9 100 aa12.89□□□□□ -0.35
U2AF1-202ENST00000380276 SLC25A20O43772 301 aa12.88□□□□□ -0.35
U2AF1-202ENST00000380276 DDTP30046 118 aa12.88□□□□□ -0.35
U2AF1-202ENST00000380276 C10orf91Q5T1B1 145 aa12.88□□□□□ -0.35
U2AF1-202ENST00000380276 H0Y8G0 127 aa12.87□□□□□ -0.35
U2AF1-202ENST00000380276 RPS29P62273 56 aaKnown RBP12.87□□□□□ -0.35
U2AF1-202ENST00000380276 C9orf153Q5TBE3 101 aa12.87□□□□□ -0.35
U2AF1-202ENST00000380276 CHCHD1Q96BP2 118 aaKnown RBP12.85□□□□□ -0.35
U2AF1-202ENST00000380276 Q9BRP9 147 aa12.84□□□□□ -0.35
U2AF1-202ENST00000380276 Q6ZRX8 168 aa12.82□□□□□ -0.36
U2AF1-202ENST00000380276 MIEN1Q9BRT3 115 aa12.82□□□□□ -0.36
U2AF1-202ENST00000380276 S100A7L2Q5SY68 101 aa12.81□□□□□ -0.36
U2AF1-202ENST00000380276 XP32Q5T750 250 aa12.8□□□□□ -0.36
U2AF1-202ENST00000380276 TRBV10-2A0A0K0K1G8 114 aa12.79□□□□□ -0.36
U2AF1-202ENST00000380276 HSBP1O75506 76 aa12.79□□□□□ -0.36
U2AF1-202ENST00000380276 APOC3P02656 99 aa12.79□□□□□ -0.36
U2AF1-202ENST00000380276 TSPEAR-AS2P59090 65 aa12.79□□□□□ -0.36
U2AF1-202ENST00000380276 SPANXB1Q9NS25 103 aaPredicted RBP12.79□□□□□ -0.36
U2AF1-202ENST00000380276 LEPROTO15243 131 aa12.77□□□□□ -0.37
U2AF1-202ENST00000380276 JOSD1Q15040 202 aaPredicted RBP12.77□□□□□ -0.37
U2AF1-202ENST00000380276 TRAV23DV6A0A075B6W5 121 aa12.75□□□□□ -0.37
U2AF1-202ENST00000380276 SNAPINO95295 136 aa12.74□□□□□ -0.37
U2AF1-202ENST00000380276 LOC107984156A0A0G2JMH3 177 aa12.73□□□□□ -0.37
U2AF1-202ENST00000380276 NDUFA5Q16718 116 aa12.73□□□□□ -0.37
U2AF1-202ENST00000380276 ARL17AQ8IVW1 177 aa12.73□□□□□ -0.37
U2AF1-202ENST00000380276 J3QQQ9 107 aa12.72□□□□□ -0.37
U2AF1-202ENST00000380276 NPC2P61916 151 aa12.72□□□□□ -0.37
U2AF1-202ENST00000380276 ST20-AS1Q8NBB2 130 aa12.72□□□□□ -0.37
U2AF1-202ENST00000380276 CRCT1Q9UGL9 99 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms