RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 SMIM11BQ8TCY0 68 aa7.06□□□□□ -1.28
POLR2J3-201ENST00000379340 TM2D3Q9BRN9 247 aa7.06□□□□□ -1.28
POLR2J3-201ENST00000379340 SCGB1A1P11684 91 aa7.05□□□□□ -1.28
POLR2J3-201ENST00000379340 ESRGQ1W209 222 aa7.05□□□□□ -1.28
POLR2J3-201ENST00000379340 OR13C6PQ8NH95 151 aa7.05□□□□□ -1.28
POLR2J3-201ENST00000379340 F8WDY8 70 aa7.04□□□□□ -1.28
POLR2J3-201ENST00000379340 TMEM126AQ9H061 195 aa7.04□□□□□ -1.28
POLR2J3-201ENST00000379340 CDIP1Q9H305 208 aa7.03□□□□□ -1.28
POLR2J3-201ENST00000379340 TEX49A0A1B0GTD5 131 aa7.03□□□□□ -1.28
POLR2J3-201ENST00000379340 A0A1B0GX51 115 aa7.03□□□□□ -1.28
POLR2J3-201ENST00000379340 DNAL4O96015 105 aa7.03□□□□□ -1.28
POLR2J3-201ENST00000379340 KRTAP26-1Q6PEX3 210 aa7.03□□□□□ -1.28
POLR2J3-201ENST00000379340 UNQ6190/PRO20217Q6UXQ8 127 aa7.03□□□□□ -1.28
POLR2J3-201ENST00000379340 C2orf48Q96LS8 159 aa7.03□□□□□ -1.28
POLR2J3-201ENST00000379340 FAM218AQ96MZ4 157 aa7.03□□□□□ -1.28
POLR2J3-201ENST00000379340 B9D2Q9BPU9 175 aa7.03□□□□□ -1.28
POLR2J3-201ENST00000379340 SACSQ9NZJ4 4579 aa7.03□□□□□ -1.28
POLR2J3-201ENST00000379340 BAALC-AS2P0C853 105 aa7.02□□□□□ -1.29
POLR2J3-201ENST00000379340 C6orf223Q8N319 242 aa7.02□□□□□ -1.29
POLR2J3-201ENST00000379340 C1orf43Q9BWL3 253 aa7.02□□□□□ -1.29
POLR2J3-201ENST00000379340 FAM240AA0A1B0GVK7 77 aa7.01□□□□□ -1.29
POLR2J3-201ENST00000379340 ZNF561-AS1K7EIQ3 104 aa7.01□□□□□ -1.29
POLR2J3-201ENST00000379340 DNAH10OSP0CZ25 163 aa7.01□□□□□ -1.29
POLR2J3-201ENST00000379340 C9orf116Q5BN46 136 aaPredicted RBP7.01□□□□□ -1.29
POLR2J3-201ENST00000379340 C10orf25Q5T742 122 aa7.01□□□□□ -1.29
POLR2J3-201ENST00000379340 DNAH1Q9P2D7 4330 aa6.99□□□□□ -1.29
POLR2J3-201ENST00000379340 INAFM2P0DMQ5 153 aa6.99□□□□□ -1.29
POLR2J3-201ENST00000379340 CAMK2N2Q96S95 79 aa6.99□□□□□ -1.29
POLR2J3-201ENST00000379340 C6orf48Q9UBA6 75 aa6.99□□□□□ -1.29
POLR2J3-201ENST00000379340 A0A087WYN8 130 aa6.99□□□□□ -1.29
POLR2J3-201ENST00000379340 C3orf84H3BNL1 204 aa6.99□□□□□ -1.29
POLR2J3-201ENST00000379340 SNCGO76070 127 aa6.99□□□□□ -1.29
POLR2J3-201ENST00000379340 ACYP1P07311 99 aa6.99□□□□□ -1.29
POLR2J3-201ENST00000379340 S100A7L2Q5SY68 101 aa6.99□□□□□ -1.29
POLR2J3-201ENST00000379340 CASC10Q5T4H9 136 aa6.99□□□□□ -1.29
POLR2J3-201ENST00000379340 C15orf56Q8N910 161 aa6.98□□□□□ -1.29
POLR2J3-201ENST00000379340 LINC00167Q96N53 147 aa6.98□□□□□ -1.29
POLR2J3-201ENST00000379340 IGKV2D-24A0A075B6R9 120 aa6.97□□□□□ -1.29
POLR2J3-201ENST00000379340 LCE6AA0A183 80 aa6.97□□□□□ -1.29
POLR2J3-201ENST00000379340 NCR3O14931 201 aa6.97□□□□□ -1.29
POLR2J3-201ENST00000379340 LECT2O14960 151 aa6.97□□□□□ -1.29
POLR2J3-201ENST00000379340 LINC00526Q96FQ7 95 aa6.97□□□□□ -1.29
POLR2J3-201ENST00000379340 LYSTQ99698 3801 aa6.97□□□□□ -1.29
POLR2J3-201ENST00000379340 HYDINQ4G0P3 5121 aa6.97□□□□□ -1.29
POLR2J3-201ENST00000379340 XGP55808 180 aa6.96□□□□□ -1.29
POLR2J3-201ENST00000379340 RMI2Q96E14 147 aa6.96□□□□□ -1.29
POLR2J3-201ENST00000379340 Q9HAA7 133 aa6.96□□□□□ -1.29
POLR2J3-201ENST00000379340 ORMDL1Q9P0S3 153 aa6.96□□□□□ -1.29
POLR2J3-201ENST00000379340 DNAH7Q8WXX0 4024 aa6.96□□□□□ -1.3
POLR2J3-201ENST00000379340 IGLV6-57P01721 117 aa6.95□□□□□ -1.3
POLR2J3-201ENST00000379340 HIGD2BQ4VC39 106 aa6.95□□□□□ -1.3
POLR2J3-201ENST00000379340 UPK3BQ9BT76 320 aa6.95□□□□□ -1.3
POLR2J3-201ENST00000379340 LINC00588Q9Y4M8 146 aa6.95□□□□□ -1.3
POLR2J3-201ENST00000379340 PRR3P79522 188 aaKnown RBP6.95□□□□□ -1.3
POLR2J3-201ENST00000379340 C22orf24Q9Y442 160 aa6.95□□□□□ -1.3
POLR2J3-201ENST00000379340 NDUFC2-KCTD14E9PQ53 114 aa6.94□□□□□ -1.3
POLR2J3-201ENST00000379340 MT-ATP8P03928 68 aa6.94□□□□□ -1.3
POLR2J3-201ENST00000379340 Q6ZRU5 148 aa6.94□□□□□ -1.3
POLR2J3-201ENST00000379340 Q8N814 137 aa6.94□□□□□ -1.3
POLR2J3-201ENST00000379340 Q8NDZ9 215 aa6.94□□□□□ -1.3
POLR2J3-201ENST00000379340 NHLRC4P0CG21 123 aaPredicted RBP6.93□□□□□ -1.3
POLR2J3-201ENST00000379340 RPL18AQ02543 176 aaKnown RBP6.93□□□□□ -1.3
POLR2J3-201ENST00000379340 C6orf99Q4VX62 202 aa6.93□□□□□ -1.3
POLR2J3-201ENST00000379340 OBSCN-AS1Q96MR7 158 aa6.93□□□□□ -1.3
POLR2J3-201ENST00000379340 CSMD3Q7Z407 3707 aa6.93□□□□□ -1.3
POLR2J3-201ENST00000379340 H3BQ85 93 aa6.92□□□□□ -1.3
POLR2J3-201ENST00000379340 SYCNQ0VAF6 134 aa6.92□□□□□ -1.3
POLR2J3-201ENST00000379340 STARD9Q9P2P6 4700 aa6.92□□□□□ -1.3
POLR2J3-201ENST00000379340 TRBV7-6A0A0J9YX20 115 aa6.91□□□□□ -1.3
POLR2J3-201ENST00000379340 TMEM256-PLSCR3K7ERE1 68 aa6.91□□□□□ -1.3
POLR2J3-201ENST00000379340 LINC00575Q6W349 94 aa6.91□□□□□ -1.3
POLR2J3-201ENST00000379340 TRAV23DV6A0A075B6W5 121 aa6.91□□□□□ -1.3
POLR2J3-201ENST00000379340 JMJD7-PLA2G4BH0Y9G9 81 aa6.91□□□□□ -1.3
POLR2J3-201ENST00000379340 M0R378 163 aa6.91□□□□□ -1.3
POLR2J3-201ENST00000379340 TLX1NBP0CAT3 122 aa6.91□□□□□ -1.3
POLR2J3-201ENST00000379340 VPREB1P12018 145 aa6.91□□□□□ -1.3
POLR2J3-201ENST00000379340 Q6Q795 121 aa6.91□□□□□ -1.3
POLR2J3-201ENST00000379340 DIRC1Q969H9 104 aa6.91□□□□□ -1.3
POLR2J3-201ENST00000379340 XAGE1AQ9HD64 81 aa6.91□□□□□ -1.3
POLR2J3-201ENST00000379340 HUWE1Q7Z6Z7 4374 aaKnown RBP6.9□□□□□ -1.3
POLR2J3-201ENST00000379340 HERC2O95714 4834 aa6.89□□□□□ -1.31
POLR2J3-201ENST00000379340 TRBV10-3A0A0K0K1G6 114 aa6.89□□□□□ -1.31
POLR2J3-201ENST00000379340 hADV29S1A0JD25 119 aa6.89□□□□□ -1.31
POLR2J3-201ENST00000379340 GHRHP01286 108 aa6.89□□□□□ -1.31
POLR2J3-201ENST00000379340 SLPIP03973 132 aa6.88□□□□□ -1.31
POLR2J3-201ENST00000379340 ZNF73O43830 326 aaPredicted RBP6.87□□□□□ -1.31
POLR2J3-201ENST00000379340 GAGE2BQ13066 116 aa6.87□□□□□ -1.31
POLR2J3-201ENST00000379340 GAGE2EQ4V326 116 aa6.87□□□□□ -1.31
POLR2J3-201ENST00000379340 SDIM1Q6ZPB5 146 aa6.87□□□□□ -1.31
POLR2J3-201ENST00000379340 GAGE2DQ9UEU5 116 aa6.87□□□□□ -1.31
POLR2J3-201ENST00000379340 PLA2G2DQ9UNK4 145 aa6.87□□□□□ -1.31
POLR2J3-201ENST00000379340 USP17L23D6RBM5 183 aa6.86□□□□□ -1.31
POLR2J3-201ENST00000379340 COX7BP24311 80 aa6.86□□□□□ -1.31
POLR2J3-201ENST00000379340 GAGE2AQ6NT46 116 aa6.86□□□□□ -1.31
POLR2J3-201ENST00000379340 Q6ZRP5 223 aa6.86□□□□□ -1.31
POLR2J3-201ENST00000379340 LINC00643Q86TS7 51 aa6.86□□□□□ -1.31
POLR2J3-201ENST00000379340 ELOF1P60002 83 aaKnown RBP6.86□□□□□ -1.31
POLR2J3-201ENST00000379340 C14orf132Q9NPU4 83 aa6.86□□□□□ -1.31
POLR2J3-201ENST00000379340 TRBV7-7A0A0K0K1E9 115 aa6.85□□□□□ -1.31
POLR2J3-201ENST00000379340 A0A1B0GV72 72 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms