RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 SMIM11BQ8TCY0 68 aa13.13□□□□□ -0.31
SSU72-204ENST00000378726 CCL18P55774 89 aa13.13□□□□□ -0.31
SSU72-204ENST00000378726 SDIM1Q6ZPB5 146 aa13.13□□□□□ -0.31
SSU72-204ENST00000378726 A0A087WYN8 130 aa13.12□□□□□ -0.31
SSU72-204ENST00000378726 C3orf22Q8N5N4 141 aa13.12□□□□□ -0.31
SSU72-204ENST00000378726 PFN2P35080 140 aa13.11□□□□□ -0.31
SSU72-204ENST00000378726 C9orf153Q5TBE3 101 aa13.11□□□□□ -0.31
SSU72-204ENST00000378726 Q8IZM0 81 aa13.11□□□□□ -0.31
SSU72-204ENST00000378726 UQCRQO14949 82 aa13.1□□□□□ -0.31
SSU72-204ENST00000378726 CXCL5P42830 114 aa13.1□□□□□ -0.31
SSU72-204ENST00000378726 DNAH9Q9NYC9 4486 aa13.1□□□□□ -0.31
SSU72-204ENST00000378726 GAGE2AQ6NT46 116 aa13.09□□□□□ -0.31
SSU72-204ENST00000378726 C9orf129Q5T035 196 aaKnown RBP13.09□□□□□ -0.31
SSU72-204ENST00000378726 B9D2Q9BPU9 175 aa13.09□□□□□ -0.31
SSU72-204ENST00000378726 IBA57-AS1B1ANH7 110 aa13.08□□□□□ -0.32
SSU72-204ENST00000378726 INAFM2P0DMQ5 153 aa13.08□□□□□ -0.32
SSU72-204ENST00000378726 LINC00526Q96FQ7 95 aa13.08□□□□□ -0.32
SSU72-204ENST00000378726 KIAA0087Q14695 138 aa13.07□□□□□ -0.32
SSU72-204ENST00000378726 DNAL4O96015 105 aa13.06□□□□□ -0.32
SSU72-204ENST00000378726 LINC01556Q5JQF7 62 aa13.05□□□□□ -0.32
SSU72-204ENST00000378726 COL7A1Q02388 2944 aa13.04□□□□□ -0.32
SSU72-204ENST00000378726 KLK5Q9Y337 293 aaPredicted RBP13.04□□□□□ -0.32
SSU72-204ENST00000378726 H0YGX0 51 aa13.03□□□□□ -0.32
SSU72-204ENST00000378726 LINC00588Q9Y4M8 146 aa13.03□□□□□ -0.32
SSU72-204ENST00000378726 OR13C6PQ8NH95 151 aa13.03□□□□□ -0.32
SSU72-204ENST00000378726 LECT2O14960 151 aa13.02□□□□□ -0.33
SSU72-204ENST00000378726 C14orf132Q9NPU4 83 aa13.02□□□□□ -0.33
SSU72-204ENST00000378726 STAB2Q8WWQ8 2551 aa13.01□□□□□ -0.33
SSU72-204ENST00000378726 COX7CP15954 63 aa13.01□□□□□ -0.33
SSU72-204ENST00000378726 SLPIP03973 132 aa13□□□□□ -0.33
SSU72-204ENST00000378726 DNAH10OSP0CZ25 163 aa13□□□□□ -0.33
SSU72-204ENST00000378726 DNHD1Q96M86 4753 aa13□□□□□ -0.33
SSU72-204ENST00000378726 SPAG11BQ08648 103 aa12.99□□□□□ -0.33
SSU72-204ENST00000378726 OBSCN-AS1Q96MR7 158 aa12.99□□□□□ -0.33
SSU72-204ENST00000378726 KRTAP26-1Q6PEX3 210 aa12.98□□□□□ -0.33
SSU72-204ENST00000378726 C6orf223Q8N319 242 aa12.98□□□□□ -0.33
SSU72-204ENST00000378726 NCR3O14931 201 aa12.97□□□□□ -0.33
SSU72-204ENST00000378726 HIST1H4AP62805 103 aaKnown RBP12.97□□□□□ -0.33
SSU72-204ENST00000378726 ATOX1O00244 68 aa12.97□□□□□ -0.33
SSU72-204ENST00000378726 CRYGAP11844 174 aa12.96□□□□□ -0.33
SSU72-204ENST00000378726 C2orf48Q96LS8 159 aa12.96□□□□□ -0.33
SSU72-204ENST00000378726 C1orf43Q9BWL3 253 aa12.96□□□□□ -0.33
SSU72-204ENST00000378726 A0A1B0GX51 115 aa12.95□□□□□ -0.34
SSU72-204ENST00000378726 UNQ6190/PRO20217Q6UXQ8 127 aa12.95□□□□□ -0.34
SSU72-204ENST00000378726 IGKV2D-24A0A075B6R9 120 aa12.94□□□□□ -0.34
SSU72-204ENST00000378726 C9orf116Q5BN46 136 aaPredicted RBP12.94□□□□□ -0.34
SSU72-204ENST00000378726 PRR3P79522 188 aaKnown RBP12.94□□□□□ -0.34
SSU72-204ENST00000378726 COX17Q14061 63 aa12.94□□□□□ -0.34
SSU72-204ENST00000378726 C10orf25Q5T742 122 aa12.94□□□□□ -0.34
SSU72-204ENST00000378726 LINC00846Q9NV44 126 aa12.94□□□□□ -0.34
SSU72-204ENST00000378726 J3KT08 172 aa12.93□□□□□ -0.34
SSU72-204ENST00000378726 IGKV3D-7A0A0C4DH55 119 aa12.92□□□□□ -0.34
SSU72-204ENST00000378726 UPK3BQ9BT76 320 aa12.91□□□□□ -0.34
SSU72-204ENST00000378726 LOC107984640A0A0U1RRK4 108 aa12.9□□□□□ -0.34
SSU72-204ENST00000378726 ORMDL1Q9P0S3 153 aa12.9□□□□□ -0.34
SSU72-204ENST00000378726 ZNF561-AS1K7EIQ3 104 aa12.9□□□□□ -0.34
SSU72-204ENST00000378726 RPS28P62857 69 aaKnown RBP12.89□□□□□ -0.35
SSU72-204ENST00000378726 RPL18AQ02543 176 aaKnown RBP12.89□□□□□ -0.35
SSU72-204ENST00000378726 HIGD2BQ4VC39 106 aa12.89□□□□□ -0.35
SSU72-204ENST00000378726 Q6JHZ5 121 aa12.88□□□□□ -0.35
SSU72-204ENST00000378726 C15orf56Q8N910 161 aa12.88□□□□□ -0.35
SSU72-204ENST00000378726 APLNQ9ULZ1 77 aa12.88□□□□□ -0.35
SSU72-204ENST00000378726 LINC00167Q96N53 147 aa12.86□□□□□ -0.35
SSU72-204ENST00000378726 hADV29S1A0JD25 119 aa12.86□□□□□ -0.35
SSU72-204ENST00000378726 GVQW2A0A096LPI5 108 aaPredicted RBP12.85□□□□□ -0.35
SSU72-204ENST00000378726 C6orf48Q9UBA6 75 aa12.85□□□□□ -0.35
SSU72-204ENST00000378726 PRKDCP78527 4128 aaKnown RBP12.85□□□□□ -0.35
SSU72-204ENST00000378726 Q8N814 137 aa12.85□□□□□ -0.35
SSU72-204ENST00000378726 CAMK2N2Q96S95 79 aa12.85□□□□□ -0.35
SSU72-204ENST00000378726 FAM19A5Q7Z5A7 132 aaPredicted RBP12.84□□□□□ -0.35
SSU72-204ENST00000378726 A0A087WVE0 104 aa12.83□□□□□ -0.36
SSU72-204ENST00000378726 CCKP06307 115 aa12.83□□□□□ -0.36
SSU72-204ENST00000378726 SERP2Q8N6R1 65 aa12.83□□□□□ -0.36
SSU72-204ENST00000378726 Q8NDZ9 215 aa12.83□□□□□ -0.36
SSU72-204ENST00000378726 MEGF8Q7Z7M0 2845 aa12.83□□□□□ -0.36
SSU72-204ENST00000378726 NDUFC2O95298 119 aa12.82□□□□□ -0.36
SSU72-204ENST00000378726 DYNC2H1Q8NCM8 4307 aaKnown RBP12.82□□□□□ -0.36
SSU72-204ENST00000378726 C5orf47Q569G3 176 aa12.81□□□□□ -0.36
SSU72-204ENST00000378726 MUC7Q8TAX7 377 aa12.81□□□□□ -0.36
SSU72-204ENST00000378726 UBE2DNLQ8IWF7 75 aa12.81□□□□□ -0.36
SSU72-204ENST00000378726 LYSTQ99698 3801 aa12.8□□□□□ -0.36
SSU72-204ENST00000378726 TMEM258P61165 79 aa12.8□□□□□ -0.36
SSU72-204ENST00000378726 KRTAP21-3Q3LHN1 58 aa12.8□□□□□ -0.36
SSU72-204ENST00000378726 Q6ZRU5 148 aa12.8□□□□□ -0.36
SSU72-204ENST00000378726 RMI2Q96E14 147 aa12.8□□□□□ -0.36
SSU72-204ENST00000378726 DNAH1Q9P2D7 4330 aa12.8□□□□□ -0.36
SSU72-204ENST00000378726 CSMD3Q7Z407 3707 aa12.8□□□□□ -0.36
SSU72-204ENST00000378726 NUPR2A6NF83 97 aa12.78□□□□□ -0.36
SSU72-204ENST00000378726 CYSTM1Q9H1C7 97 aa12.78□□□□□ -0.36
SSU72-204ENST00000378726 JMJD7-PLA2G4BH0Y9G9 81 aa12.77□□□□□ -0.36
SSU72-204ENST00000378726 TMEM256-PLSCR3K7ERE1 68 aa12.77□□□□□ -0.36
SSU72-204ENST00000378726 C6orf99Q4VX62 202 aa12.77□□□□□ -0.36
SSU72-204ENST00000378726 CASC10Q5T4H9 136 aa12.77□□□□□ -0.36
SSU72-204ENST00000378726 USP17L23D6RBM5 183 aa12.77□□□□□ -0.37
SSU72-204ENST00000378726 PLECQ15149 4684 aaKnown RBP12.77□□□□□ -0.37
SSU72-204ENST00000378726 F8WDY8 70 aa12.76□□□□□ -0.37
SSU72-204ENST00000378726 DPH3Q96FX2 82 aa12.76□□□□□ -0.37
SSU72-204ENST00000378726 SYCNQ0VAF6 134 aa12.74□□□□□ -0.37
SSU72-204ENST00000378726 KRTAP1-5Q9BYS1 174 aa12.74□□□□□ -0.37
SSU72-204ENST00000378726 XAGE1AQ9HD64 81 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms