RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 CIRBP-AS1Q8TBR5 109 aa14.39□□□□□ -0.11
SKI-201ENST00000378536 AKAP13Q12802 2813 aa14.38□□□□□ -0.11
SKI-201ENST00000378536 LINC00612Q8N6U2 182 aa14.38□□□□□ -0.11
SKI-201ENST00000378536 CFAP46Q8IYW2 2715 aa14.37□□□□□ -0.11
SKI-201ENST00000378536 USP24Q9UPU5 2620 aa14.37□□□□□ -0.11
SKI-201ENST00000378536 GVQW2A0A096LPI5 108 aaPredicted RBP14.37□□□□□ -0.11
SKI-201ENST00000378536 LINC00167Q96N53 147 aa14.37□□□□□ -0.11
SKI-201ENST00000378536 IMUPQ9GZP8 106 aa14.37□□□□□ -0.11
SKI-201ENST00000378536 WFDC13Q8IUB5 93 aa14.36□□□□□ -0.11
SKI-201ENST00000378536 FAM240AA0A1B0GVK7 77 aa14.36□□□□□ -0.11
SKI-201ENST00000378536 SOSTDC1Q6X4U4 206 aa14.35□□□□□ -0.11
SKI-201ENST00000378536 TM2D3Q9BRN9 247 aa14.34□□□□□ -0.11
SKI-201ENST00000378536 SMCR5Q8TEV8 140 aa14.34□□□□□ -0.11
SKI-201ENST00000378536 C20orf197Q8N268 126 aa14.32□□□□□ -0.12
SKI-201ENST00000378536 RTL8CO15255 209 aa14.32□□□□□ -0.12
SKI-201ENST00000378536 TRIOO75962 3097 aa14.31□□□□□ -0.12
SKI-201ENST00000378536 FAM19A3Q7Z5A8 133 aa14.3□□□□□ -0.12
SKI-201ENST00000378536 SZT2Q5T011 3432 aa14.3□□□□□ -0.12
SKI-201ENST00000378536 A0A0C4DFX4 3053 aa14.29□□□□□ -0.12
SKI-201ENST00000378536 WDFY4Q6ZS81 3184 aa14.29□□□□□ -0.12
SKI-201ENST00000378536 UQCRQO14949 82 aa14.29□□□□□ -0.12
SKI-201ENST00000378536 XGP55808 180 aa14.29□□□□□ -0.12
SKI-201ENST00000378536 C16orf90A8MZG2 172 aa14.28□□□□□ -0.12
SKI-201ENST00000378536 CENPEQ02224 2701 aa14.27□□□□□ -0.13
SKI-201ENST00000378536 XIRP2A4UGR9 3374 aa14.26□□□□□ -0.13
SKI-201ENST00000378536 CR1P17927 2039 aa14.26□□□□□ -0.13
SKI-201ENST00000378536 TRBV7-6A0A0J9YX20 115 aa14.24□□□□□ -0.13
SKI-201ENST00000378536 A0A087WSZ3 146 aa14.24□□□□□ -0.13
SKI-201ENST00000378536 PRR34Q9NV39 138 aa14.23□□□□□ -0.13
SKI-201ENST00000378536 PHF5AQ7RTV0 110 aaKnown RBP14.23□□□□□ -0.13
SKI-201ENST00000378536 ELOF1P60002 83 aaKnown RBP14.22□□□□□ -0.13
SKI-201ENST00000378536 Q6ZRP5 223 aa14.21□□□□□ -0.13
SKI-201ENST00000378536 CASC2Q6XLA1 102 aa14.21□□□□□ -0.14
SKI-201ENST00000378536 C3orf22Q8N5N4 141 aa14.21□□□□□ -0.14
SKI-201ENST00000378536 LITAFQ99732 161 aa14.21□□□□□ -0.14
SKI-201ENST00000378536 KIAA0087Q14695 138 aa14.2□□□□□ -0.14
SKI-201ENST00000378536 SERP2Q8N6R1 65 aa14.2□□□□□ -0.14
SKI-201ENST00000378536 Q6ZRX8 168 aa14.16□□□□□ -0.14
SKI-201ENST00000378536 FAM218AQ96MZ4 157 aa14.16□□□□□ -0.14
SKI-201ENST00000378536 DSPP15924 2871 aaKnown RBP14.16□□□□□ -0.14
SKI-201ENST00000378536 IGHV6-1A0A0B4J1U7 121 aa14.15□□□□□ -0.14
SKI-201ENST00000378536 CHTF8P0CG12 524 aa14.15□□□□□ -0.14
SKI-201ENST00000378536 FAM30AQ9NZY2 134 aa14.15□□□□□ -0.14
SKI-201ENST00000378536 Q6Q795 121 aa14.13□□□□□ -0.15
SKI-201ENST00000378536 BRK1Q8WUW1 75 aa14.12□□□□□ -0.15
SKI-201ENST00000378536 VPREB1P12018 145 aa14.12□□□□□ -0.15
SKI-201ENST00000378536 Q6ZVQ6 151 aa14.12□□□□□ -0.15
SKI-201ENST00000378536 CFAP54Q96N23 3096 aa14.12□□□□□ -0.15
SKI-201ENST00000378536 LIMD2Q9BT23 127 aa14.11□□□□□ -0.15
SKI-201ENST00000378536 IGSF10Q6WRI0 2623 aa14.11□□□□□ -0.15
SKI-201ENST00000378536 C15orf56Q8N910 161 aa14.11□□□□□ -0.15
SKI-201ENST00000378536 LINC00846Q9NV44 126 aa14.11□□□□□ -0.15
SKI-201ENST00000378536 ATRQ13535 2644 aa14.1□□□□□ -0.15
SKI-201ENST00000378536 WIPF1O43516 503 aa14.1□□□□□ -0.15
SKI-201ENST00000378536 EPM2AB3EWF7 344 aa14.09□□□□□ -0.15
SKI-201ENST00000378536 MGAM2Q2M2H8 2515 aa14.09□□□□□ -0.15
SKI-201ENST00000378536 A0A087WVE0 104 aa14.09□□□□□ -0.15
SKI-201ENST00000378536 SVIPQ8NHG7 77 aa14.09□□□□□ -0.15
SKI-201ENST00000378536 FAM236DA0A1B0GTK5 79 aa14.09□□□□□ -0.15
SKI-201ENST00000378536 FAM236CP0DP71 79 aa14.09□□□□□ -0.15
SKI-201ENST00000378536 SNURFQ9Y675 71 aa14.09□□□□□ -0.15
SKI-201ENST00000378536 DEFB116Q30KQ4 102 aa14.09□□□□□ -0.15
SKI-201ENST00000378536 FAM168BA1KXE4 195 aa14.08□□□□□ -0.16
SKI-201ENST00000378536 SEC61GP60059 68 aa14.08□□□□□ -0.16
SKI-201ENST00000378536 APLNQ9ULZ1 77 aa14.08□□□□□ -0.16
SKI-201ENST00000378536 NDUFC1O43677 76 aa14.07□□□□□ -0.16
SKI-201ENST00000378536 TNRC18O15417 2968 aaPredicted RBP14.07□□□□□ -0.16
SKI-201ENST00000378536 IGLV6-57P01721 117 aa14.07□□□□□ -0.16
SKI-201ENST00000378536 COX7CP15954 63 aa14.07□□□□□ -0.16
SKI-201ENST00000378536 MOBPQ13875 183 aa14.06□□□□□ -0.16
SKI-201ENST00000378536 ZNF575Q86XF7 245 aa14.06□□□□□ -0.16
SKI-201ENST00000378536 BCE1O60756 84 aa14.05□□□□□ -0.16
SKI-201ENST00000378536 LINC01547P58512 204 aaPredicted RBP14.05□□□□□ -0.16
SKI-201ENST00000378536 SERTAD4-AS1Q5TG53 156 aa14.05□□□□□ -0.16
SKI-201ENST00000378536 FAM229AH3BQW9 127 aa14.03□□□□□ -0.16
SKI-201ENST00000378536 SMCPP49901 116 aaPredicted RBP14.03□□□□□ -0.16
SKI-201ENST00000378536 MAST4O15021 2626 aa14.02□□□□□ -0.17
SKI-201ENST00000378536 TRAV7A0A075B6U4 112 aa14.01□□□□□ -0.17
SKI-201ENST00000378536 ST20-AS1Q8NBB2 130 aa14.01□□□□□ -0.17
SKI-201ENST00000378536 SPTSSBQ8NFR3 76 aa13.99□□□□□ -0.17
SKI-201ENST00000378536 IGLV1-50A0A075B6I6 118 aa13.99□□□□□ -0.17
SKI-201ENST00000378536 PRO0461Q9UI25 63 aa13.99□□□□□ -0.17
SKI-201ENST00000378536 A0A087WTM6 91 aa13.99□□□□□ -0.17
SKI-201ENST00000378536 VPS13AQ96RL7 3174 aa13.98□□□□□ -0.17
SKI-201ENST00000378536 MPLKIPQ8TAP9 179 aa13.98□□□□□ -0.17
SKI-201ENST00000378536 CXCL6P80162 114 aa13.98□□□□□ -0.17
SKI-201ENST00000378536 Q8N9L7 120 aa13.97□□□□□ -0.17
SKI-201ENST00000378536 ATP5EP56381 51 aaPredicted RBP13.96□□□□□ -0.17
SKI-201ENST00000378536 LINC00476Q8WZB0 136 aa13.96□□□□□ -0.17
SKI-201ENST00000378536 CRYGAP11844 174 aa13.96□□□□□ -0.17
SKI-201ENST00000378536 KCNQ1DNQ9H478 68 aa13.96□□□□□ -0.17
SKI-201ENST00000378536 Q8NBF4 154 aa13.96□□□□□ -0.18
SKI-201ENST00000378536 HCG22E2RYF7 251 aa13.95□□□□□ -0.18
SKI-201ENST00000378536 A0A1B0GW54 56 aa13.95□□□□□ -0.18
SKI-201ENST00000378536 EIF4EBP3O60516 100 aaPredicted RBP13.95□□□□□ -0.18
SKI-201ENST00000378536 LINC00208Q96KT6 92 aa13.94□□□□□ -0.18
SKI-201ENST00000378536 CCDC179H3BU77 68 aa13.94□□□□□ -0.18
SKI-201ENST00000378536 TLX1NBP0CAT3 122 aa13.93□□□□□ -0.18
SKI-201ENST00000378536 C9orf129Q5T035 196 aaKnown RBP13.93□□□□□ -0.18
SKI-201ENST00000378536 Q6ZQT0 140 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms