RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 EPM2AB3EWF7 344 aa7.38□□□□□ -1.23
DEPDC4-202ENST00000378244 FAM229AH3BQW9 127 aa7.38□□□□□ -1.23
DEPDC4-202ENST00000378244 LEPROTO15243 131 aa7.38□□□□□ -1.23
DEPDC4-202ENST00000378244 VAMP3Q15836 100 aa7.38□□□□□ -1.23
DEPDC4-202ENST00000378244 LGALS3P17931 250 aaKnown RBP7.37□□□□□ -1.23
DEPDC4-202ENST00000378244 MEIG1Q5JSS6 88 aa7.37□□□□□ -1.23
DEPDC4-202ENST00000378244 LINC00158P58513 81 aa7.36□□□□□ -1.23
DEPDC4-202ENST00000378244 SERTAD4-AS1Q5TG53 156 aa7.36□□□□□ -1.23
DEPDC4-202ENST00000378244 PLEKHB2Q96CS7 222 aa7.36□□□□□ -1.23
DEPDC4-202ENST00000378244 E9PLD3 99 aa7.36□□□□□ -1.23
DEPDC4-202ENST00000378244 TTTY13Q9BZ97 58 aa7.36□□□□□ -1.23
DEPDC4-202ENST00000378244 IGKV2D-26A0A0A0MRZ7 120 aa7.35□□□□□ -1.23
DEPDC4-202ENST00000378244 MYMXA0A1B0GTQ4 84 aa7.35□□□□□ -1.23
DEPDC4-202ENST00000378244 A0A1B0GV90 55 aa7.35□□□□□ -1.23
DEPDC4-202ENST00000378244 SMIM13P0DJ93 91 aa7.35□□□□□ -1.23
DEPDC4-202ENST00000378244 PHF5AQ7RTV0 110 aaKnown RBP7.35□□□□□ -1.23
DEPDC4-202ENST00000378244 KRTAP7-1Q8IUC3 87 aa7.35□□□□□ -1.23
DEPDC4-202ENST00000378244 SFTA2Q6UW10 78 aa7.35□□□□□ -1.23
DEPDC4-202ENST00000378244 J3QL48 77 aa7.34□□□□□ -1.23
DEPDC4-202ENST00000378244 DAND5Q8N907 189 aa7.34□□□□□ -1.23
DEPDC4-202ENST00000378244 C12orf57Q99622 126 aa7.34□□□□□ -1.23
DEPDC4-202ENST00000378244 C7orf33Q8WU49 177 aa7.34□□□□□ -1.23
DEPDC4-202ENST00000378244 SND1-IT1Q9HBX3 110 aa7.34□□□□□ -1.23
DEPDC4-202ENST00000378244 NMUP48645 174 aa7.33□□□□□ -1.24
DEPDC4-202ENST00000378244 COX17Q14061 63 aa7.33□□□□□ -1.24
DEPDC4-202ENST00000378244 ABCA13Q86UQ4 5058 aa7.33□□□□□ -1.24
DEPDC4-202ENST00000378244 PCLOQ9Y6V0 5065 aa7.33□□□□□ -1.24
DEPDC4-202ENST00000378244 RPL37AP61513 92 aaKnown RBP7.32□□□□□ -1.24
DEPDC4-202ENST00000378244 MIR7-3HGQ8N6C7 128 aa7.32□□□□□ -1.24
DEPDC4-202ENST00000378244 PLA2G1BP04054 148 aaKnown RBP7.32□□□□□ -1.24
DEPDC4-202ENST00000378244 FLG2Q5D862 2391 aaPredicted RBP7.31□□□□□ -1.24
DEPDC4-202ENST00000378244 VPREB1P12018 145 aa7.31□□□□□ -1.24
DEPDC4-202ENST00000378244 ZNF815PA8K554 130 aa7.3□□□□□ -1.24
DEPDC4-202ENST00000378244 C22orf24Q9Y442 160 aa7.3□□□□□ -1.24
DEPDC4-202ENST00000378244 VPS13BQ7Z7G8 4022 aa7.3□□□□□ -1.24
DEPDC4-202ENST00000378244 NPC2P61916 151 aa7.3□□□□□ -1.24
DEPDC4-202ENST00000378244 UBE2BP63146 152 aa7.3□□□□□ -1.24
DEPDC4-202ENST00000378244 KRTAP11-1Q8IUC1 163 aa7.3□□□□□ -1.24
DEPDC4-202ENST00000378244 A0A0J9YXY3 114 aa7.29□□□□□ -1.24
DEPDC4-202ENST00000378244 PCP2Q8IVA1 136 aa7.29□□□□□ -1.24
DEPDC4-202ENST00000378244 Q8NDZ9 215 aa7.29□□□□□ -1.24
DEPDC4-202ENST00000378244 RPL37AP8A6NKH3 93 aa7.28□□□□□ -1.24
DEPDC4-202ENST00000378244 AKR1D1P51857 326 aa7.28□□□□□ -1.24
DEPDC4-202ENST00000378244 NKAPP1Q8N9T2 125 aa7.28□□□□□ -1.24
DEPDC4-202ENST00000378244 KRTAP10-4P60372 401 aaPredicted RBP7.28□□□□□ -1.24
DEPDC4-202ENST00000378244 PRR3P79522 188 aaKnown RBP7.28□□□□□ -1.24
DEPDC4-202ENST00000378244 ADAMTSL4-AS1Q5T5F5 129 aa7.28□□□□□ -1.24
DEPDC4-202ENST00000378244 SCGB1D4Q6XE38 83 aa7.27□□□□□ -1.25
DEPDC4-202ENST00000378244 MRPL55Q7Z7F7 128 aaKnown RBP7.27□□□□□ -1.25
DEPDC4-202ENST00000378244 PSORS1C2Q9UIG4 136 aa7.27□□□□□ -1.25
DEPDC4-202ENST00000378244 INAFM2P0DMQ5 153 aa7.26□□□□□ -1.25
DEPDC4-202ENST00000378244 HNRNPA3P51991 378 aaKnown RBP7.26□□□□□ -1.25
DEPDC4-202ENST00000378244 IGKV2-28A0A075B6P5 120 aa7.26□□□□□ -1.25
DEPDC4-202ENST00000378244 EIF4EBP3O60516 100 aaPredicted RBP7.26□□□□□ -1.25
DEPDC4-202ENST00000378244 IGKV2D-28P01615 120 aa7.26□□□□□ -1.25
DEPDC4-202ENST00000378244 C1orf137Q5JT78 98 aa7.26□□□□□ -1.25
DEPDC4-202ENST00000378244 LINC00167Q96N53 147 aa7.26□□□□□ -1.25
DEPDC4-202ENST00000378244 MIEN1Q9BRT3 115 aa7.26□□□□□ -1.25
DEPDC4-202ENST00000378244 RPL24P83731 157 aaKnown RBP7.25□□□□□ -1.25
DEPDC4-202ENST00000378244 TP73-AS1Q9UF72 201 aa7.25□□□□□ -1.25
DEPDC4-202ENST00000378244 MYCBP2O75592 4640 aa7.24□□□□□ -1.25
DEPDC4-202ENST00000378244 PLA2G2DQ9UNK4 145 aa7.24□□□□□ -1.25
DEPDC4-202ENST00000378244 A0A1B0GV72 72 aa7.23□□□□□ -1.25
DEPDC4-202ENST00000378244 NCR3O14931 201 aa7.23□□□□□ -1.25
DEPDC4-202ENST00000378244 JOSD1Q15040 202 aaPredicted RBP7.23□□□□□ -1.25
DEPDC4-202ENST00000378244 LITAFQ99732 161 aa7.23□□□□□ -1.25
DEPDC4-202ENST00000378244 PAM16Q9Y3D7 125 aa7.23□□□□□ -1.25
DEPDC4-202ENST00000378244 SOSTDC1Q6X4U4 206 aa7.23□□□□□ -1.25
DEPDC4-202ENST00000378244 PYY3Q5JQD4 70 aa7.22□□□□□ -1.25
DEPDC4-202ENST00000378244 IGLV5-37A0A075B6J1 123 aa7.21□□□□□ -1.26
DEPDC4-202ENST00000378244 C14orf144Q96I85 54 aa7.21□□□□□ -1.26
DEPDC4-202ENST00000378244 VAMP8Q9BV40 100 aa7.21□□□□□ -1.26
DEPDC4-202ENST00000378244 SPATA45Q537H7 98 aa7.2□□□□□ -1.26
DEPDC4-202ENST00000378244 LINC00308Q8TCZ7 52 aa7.2□□□□□ -1.26
DEPDC4-202ENST00000378244 TIMM17BO60830 172 aa7.19□□□□□ -1.26
DEPDC4-202ENST00000378244 IGLV1-50A0A075B6I6 118 aa7.18□□□□□ -1.26
DEPDC4-202ENST00000378244 M0R378 163 aa7.18□□□□□ -1.26
DEPDC4-202ENST00000378244 IGLV7-43P04211 117 aa7.18□□□□□ -1.26
DEPDC4-202ENST00000378244 LOC107984156A0A0G2JMH3 177 aa7.18□□□□□ -1.26
DEPDC4-202ENST00000378244 ARL17AQ8IVW1 177 aa7.18□□□□□ -1.26
DEPDC4-202ENST00000378244 TRBV10-3A0A0K0K1G6 114 aa7.17□□□□□ -1.26
DEPDC4-202ENST00000378244 TSPAN13O95857 204 aa7.17□□□□□ -1.26
DEPDC4-202ENST00000378244 SRSF9Q13242 221 aaKnown RBP eCLIP7.17□□□□□ -1.26
DEPDC4-202ENST00000378244 V9GYY9 64 aa7.17□□□□□ -1.26
DEPDC4-202ENST00000378244 LRP1Q07954 4544 aaKnown RBP7.16□□□□□ -1.26
DEPDC4-202ENST00000378244 COX8AP10176 69 aa7.16□□□□□ -1.26
DEPDC4-202ENST00000378244 TMEM126AQ9H061 195 aa7.16□□□□□ -1.26
DEPDC4-202ENST00000378244 S100A7L2Q5SY68 101 aa7.16□□□□□ -1.26
DEPDC4-202ENST00000378244 MUSTN1Q8IVN3 82 aa7.16□□□□□ -1.26
DEPDC4-202ENST00000378244 SPANXB1Q9NS25 103 aaPredicted RBP7.16□□□□□ -1.26
DEPDC4-202ENST00000378244 SPANXCQ9NY87 97 aa7.16□□□□□ -1.26
DEPDC4-202ENST00000378244 REG3GQ6UW15 175 aa7.15□□□□□ -1.26
DEPDC4-202ENST00000378244 SPANXDQ9BXN6 97 aa7.15□□□□□ -1.26
DEPDC4-202ENST00000378244 BCE1O60756 84 aa7.15□□□□□ -1.27
DEPDC4-202ENST00000378244 DDTP30046 118 aa7.15□□□□□ -1.27
DEPDC4-202ENST00000378244 PRLHP81277 87 aa7.15□□□□□ -1.27
DEPDC4-202ENST00000378244 OR13C6PQ8NH95 151 aa7.15□□□□□ -1.27
DEPDC4-202ENST00000378244 DMBT1Q9UGM3 2413 aaPredicted RBP7.14□□□□□ -1.27
DEPDC4-202ENST00000378244 NDUFC2O95298 119 aa7.14□□□□□ -1.27
DEPDC4-202ENST00000378244 SPINK6Q6UWN8 80 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms