RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 H3BT86 120 aa11.15□□□□□ -0.63
HLA-A-202ENST00000376806 Q8NDZ9 215 aa11.15□□□□□ -0.63
HLA-A-202ENST00000376806 VPS25Q9BRG1 176 aa11.15□□□□□ -0.63
HLA-A-202ENST00000376806 PRR3P79522 188 aaKnown RBP11.14□□□□□ -0.63
HLA-A-202ENST00000376806 PPDPFLQ8WWR9 84 aa11.14□□□□□ -0.63
HLA-A-202ENST00000376806 Q6ZRU5 148 aa11.13□□□□□ -0.63
HLA-A-202ENST00000376806 CARD19Q96LW7 228 aa11.13□□□□□ -0.63
HLA-A-202ENST00000376806 FAM218AQ96MZ4 157 aa11.13□□□□□ -0.63
HLA-A-202ENST00000376806 TRACP01848 142 aa11.12□□□□□ -0.63
HLA-A-202ENST00000376806 NCR3O14931 201 aa11.12□□□□□ -0.63
HLA-A-202ENST00000376806 NHLRC4P0CG21 123 aaPredicted RBP11.12□□□□□ -0.63
HLA-A-202ENST00000376806 F8WDY8 70 aa11.11□□□□□ -0.63
HLA-A-202ENST00000376806 RMI2Q96E14 147 aa11.1□□□□□ -0.63
HLA-A-202ENST00000376806 H0YGX0 51 aa11.09□□□□□ -0.63
HLA-A-202ENST00000376806 TMEM126AQ9H061 195 aa11.09□□□□□ -0.63
HLA-A-202ENST00000376806 APLNQ9ULZ1 77 aa11.09□□□□□ -0.63
HLA-A-202ENST00000376806 DNAH1Q9P2D7 4330 aa11.08□□□□□ -0.64
HLA-A-202ENST00000376806 XAGE1AQ9HD64 81 aa11.08□□□□□ -0.64
HLA-A-202ENST00000376806 DYNC2H1Q8NCM8 4307 aaKnown RBP11.07□□□□□ -0.64
HLA-A-202ENST00000376806 SYCNQ0VAF6 134 aa11.07□□□□□ -0.64
HLA-A-202ENST00000376806 A0A087WYN8 130 aa11.06□□□□□ -0.64
HLA-A-202ENST00000376806 NDUFC2-KCTD14E9PQ53 114 aa11.06□□□□□ -0.64
HLA-A-202ENST00000376806 CASC10Q5T4H9 136 aa11.06□□□□□ -0.64
HLA-A-202ENST00000376806 CBY1Q9Y3M2 126 aa11.06□□□□□ -0.64
HLA-A-202ENST00000376806 S100A7L2Q5SY68 101 aa11.06□□□□□ -0.64
HLA-A-202ENST00000376806 USP17L23D6RBM5 183 aa11.05□□□□□ -0.64
HLA-A-202ENST00000376806 UBE2DNLQ8IWF7 75 aa11.05□□□□□ -0.64
HLA-A-202ENST00000376806 RPL18AQ02543 176 aaKnown RBP11.04□□□□□ -0.64
HLA-A-202ENST00000376806 TEX49A0A1B0GTD5 131 aa11.04□□□□□ -0.64
HLA-A-202ENST00000376806 DNAL4O96015 105 aa11.02□□□□□ -0.64
HLA-A-202ENST00000376806 IGLV6-57P01721 117 aa11.02□□□□□ -0.64
HLA-A-202ENST00000376806 KRTAP1-5Q9BYS1 174 aa11.02□□□□□ -0.64
HLA-A-202ENST00000376806 NUPR2A6NF83 97 aa11.02□□□□□ -0.65
HLA-A-202ENST00000376806 LECT2O14960 151 aa11.02□□□□□ -0.65
HLA-A-202ENST00000376806 BAALC-AS2P0C853 105 aa11.01□□□□□ -0.65
HLA-A-202ENST00000376806 VPREB1P12018 145 aa11.01□□□□□ -0.65
HLA-A-202ENST00000376806 Q6ZRP5 223 aa11.01□□□□□ -0.65
HLA-A-202ENST00000376806 GAGE2EQ4V326 116 aa11□□□□□ -0.65
HLA-A-202ENST00000376806 GAGE2DQ9UEU5 116 aa11□□□□□ -0.65
HLA-A-202ENST00000376806 C6orf99Q4VX62 202 aa11□□□□□ -0.65
HLA-A-202ENST00000376806 SLPIP03973 132 aa10.99□□□□□ -0.65
HLA-A-202ENST00000376806 TRBV10-3A0A0K0K1G6 114 aa10.98□□□□□ -0.65
HLA-A-202ENST00000376806 C22orf24Q9Y442 160 aa10.98□□□□□ -0.65
HLA-A-202ENST00000376806 A0A1B0GX51 115 aa10.98□□□□□ -0.65
HLA-A-202ENST00000376806 TLX1NBP0CAT3 122 aa10.98□□□□□ -0.65
HLA-A-202ENST00000376806 CSMD3Q7Z407 3707 aa10.97□□□□□ -0.65
HLA-A-202ENST00000376806 C9orf129Q5T035 196 aaKnown RBP10.96□□□□□ -0.65
HLA-A-202ENST00000376806 TRAV23DV6A0A075B6W5 121 aa10.95□□□□□ -0.66
HLA-A-202ENST00000376806 LINC00167Q96N53 147 aa10.95□□□□□ -0.66
HLA-A-202ENST00000376806 M0R378 163 aa10.95□□□□□ -0.66
HLA-A-202ENST00000376806 LYSTQ99698 3801 aa10.95□□□□□ -0.66
HLA-A-202ENST00000376806 CDIP1Q9H305 208 aa10.95□□□□□ -0.66
HLA-A-202ENST00000376806 DNAH7Q8WXX0 4024 aa10.94□□□□□ -0.66
HLA-A-202ENST00000376806 Q8N814 137 aa10.94□□□□□ -0.66
HLA-A-202ENST00000376806 ORMDL1Q9P0S3 153 aa10.93□□□□□ -0.66
HLA-A-202ENST00000376806 DIRC1Q969H9 104 aa10.92□□□□□ -0.66
HLA-A-202ENST00000376806 LINC00575Q6W349 94 aa10.91□□□□□ -0.66
HLA-A-202ENST00000376806 PSCAO43653 123 aa10.9□□□□□ -0.66
HLA-A-202ENST00000376806 ZNF73O43830 326 aaPredicted RBP10.9□□□□□ -0.66
HLA-A-202ENST00000376806 STARD9Q9P2P6 4700 aa10.89□□□□□ -0.67
HLA-A-202ENST00000376806 TTC32Q5I0X7 151 aa10.89□□□□□ -0.67
HLA-A-202ENST00000376806 SERTAD4-AS1Q5TG53 156 aa10.89□□□□□ -0.67
HLA-A-202ENST00000376806 SNCGO76070 127 aa10.89□□□□□ -0.67
HLA-A-202ENST00000376806 NKAPP1Q8N9T2 125 aa10.89□□□□□ -0.67
HLA-A-202ENST00000376806 PLA2G2DQ9UNK4 145 aa10.89□□□□□ -0.67
HLA-A-202ENST00000376806 PLECQ15149 4684 aaKnown RBP10.88□□□□□ -0.67
HLA-A-202ENST00000376806 NBDYA0A0U1RRE5 68 aa10.88□□□□□ -0.67
HLA-A-202ENST00000376806 SIGMAR1Q99720 223 aa10.88□□□□□ -0.67
HLA-A-202ENST00000376806 LOC107984640A0A0U1RRK4 108 aa10.87□□□□□ -0.67
HLA-A-202ENST00000376806 INAFM2P0DMQ5 153 aa10.87□□□□□ -0.67
HLA-A-202ENST00000376806 TENM2Q9NT68 2774 aa10.87□□□□□ -0.67
HLA-A-202ENST00000376806 hADV29S1A0JD25 119 aa10.87□□□□□ -0.67
HLA-A-202ENST00000376806 WWC2-AS2Q96NR7 200 aa10.87□□□□□ -0.67
HLA-A-202ENST00000376806 TRBV7-6A0A0J9YX20 115 aa10.86□□□□□ -0.67
HLA-A-202ENST00000376806 FAM240AA0A1B0GVK7 77 aa10.86□□□□□ -0.67
HLA-A-202ENST00000376806 COX7BP24311 80 aa10.86□□□□□ -0.67
HLA-A-202ENST00000376806 GAGE2BQ13066 116 aa10.86□□□□□ -0.67
HLA-A-202ENST00000376806 IGLV5-37A0A075B6J1 123 aa10.85□□□□□ -0.67
HLA-A-202ENST00000376806 ELOF1P60002 83 aaKnown RBP10.85□□□□□ -0.67
HLA-A-202ENST00000376806 C7orf33Q8WU49 177 aa10.85□□□□□ -0.67
HLA-A-202ENST00000376806 OBSCN-AS1Q96MR7 158 aa10.85□□□□□ -0.67
HLA-A-202ENST00000376806 DNAH10Q8IVF4 4471 aa10.85□□□□□ -0.67
HLA-A-202ENST00000376806 XGP55808 180 aa10.85□□□□□ -0.67
HLA-A-202ENST00000376806 CNBPP62633 177 aaKnown RBP10.85□□□□□ -0.67
HLA-A-202ENST00000376806 FAM168BA1KXE4 195 aa10.84□□□□□ -0.67
HLA-A-202ENST00000376806 C14orf177Q52M58 125 aa10.84□□□□□ -0.67
HLA-A-202ENST00000376806 TMEM256-PLSCR3K7ERE1 68 aa10.83□□□□□ -0.68
HLA-A-202ENST00000376806 KCNQ1DNQ9H478 68 aa10.81□□□□□ -0.68
HLA-A-202ENST00000376806 MT-ATP8P03928 68 aa10.81□□□□□ -0.68
HLA-A-202ENST00000376806 KRTAP7-1Q8IUC3 87 aa10.81□□□□□ -0.68
HLA-A-202ENST00000376806 C14orf132Q9NPU4 83 aa10.81□□□□□ -0.68
HLA-A-202ENST00000376806 Q6ZQY7 126 aa10.8□□□□□ -0.68
HLA-A-202ENST00000376806 LINC00528Q8N1L1 170 aa10.8□□□□□ -0.68
HLA-A-202ENST00000376806 VPS13DQ5THJ4 4388 aa10.8□□□□□ -0.68
HLA-A-202ENST00000376806 ACYP1P07311 99 aa10.79□□□□□ -0.68
HLA-A-202ENST00000376806 PCP4P48539 62 aa10.79□□□□□ -0.68
HLA-A-202ENST00000376806 Q6ZRN7 208 aaPredicted RBP10.79□□□□□ -0.68
HLA-A-202ENST00000376806 FAM19A5Q7Z5A7 132 aaPredicted RBP10.79□□□□□ -0.68
HLA-A-202ENST00000376806 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.78□□□□□ -0.68
HLA-A-202ENST00000376806 A0A1B0GV72 72 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms