RNA–Protein interactions for RNA: ENST00000373795.6

SRSF4-201, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRSF4, Length 2,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-201ENST00000373795 K7EIL1 84 aa13.58□□□□□ -0.24
SRSF4-201ENST00000373795 ENHOQ6UWT2 76 aa13.58□□□□□ -0.24
SRSF4-201ENST00000373795 C14orf132Q9NPU4 83 aa13.58□□□□□ -0.24
SRSF4-201ENST00000373795 H3BNG1 76 aa13.58□□□□□ -0.24
SRSF4-201ENST00000373795 LINC01561Q8N1V8 128 aa13.57□□□□□ -0.24
SRSF4-201ENST00000373795 ESRGQ1W209 222 aa13.57□□□□□ -0.24
SRSF4-201ENST00000373795 C9orf116Q5BN46 136 aaPredicted RBP13.57□□□□□ -0.24
SRSF4-201ENST00000373795 PRR34Q9NV39 138 aa13.57□□□□□ -0.24
SRSF4-201ENST00000373795 FAM236AA0A1B0GUQ0 79 aa13.56□□□□□ -0.24
SRSF4-201ENST00000373795 FAM236BA0A1B0GV22 79 aa13.56□□□□□ -0.24
SRSF4-201ENST00000373795 IMUPQ9GZP8 106 aa13.56□□□□□ -0.24
SRSF4-201ENST00000373795 CFAP161Q6P656 301 aa13.55□□□□□ -0.24
SRSF4-201ENST00000373795 NCR3O14931 201 aa13.54□□□□□ -0.24
SRSF4-201ENST00000373795 MDFIQ99750 246 aa13.53□□□□□ -0.24
SRSF4-201ENST00000373795 LINC00526Q96FQ7 95 aa13.53□□□□□ -0.24
SRSF4-201ENST00000373795 OBSCN-AS1Q96MR7 158 aa13.53□□□□□ -0.24
SRSF4-201ENST00000373795 C6orf223Q8N319 242 aa13.51□□□□□ -0.25
SRSF4-201ENST00000373795 TM2D3Q9BRN9 247 aa13.51□□□□□ -0.25
SRSF4-201ENST00000373795 COX17Q14061 63 aa13.5□□□□□ -0.25
SRSF4-201ENST00000373795 Q8NDZ9 215 aa13.5□□□□□ -0.25
SRSF4-201ENST00000373795 CXCL5P42830 114 aa13.5□□□□□ -0.25
SRSF4-201ENST00000373795 ORMDL1Q9P0S3 153 aa13.5□□□□□ -0.25
SRSF4-201ENST00000373795 KLK5Q9Y337 293 aaPredicted RBP13.5□□□□□ -0.25
SRSF4-201ENST00000373795 COL7A1Q02388 2944 aa13.5□□□□□ -0.25
SRSF4-201ENST00000373795 NDUFC2O95298 119 aa13.48□□□□□ -0.25
SRSF4-201ENST00000373795 C10orf25Q5T742 122 aa13.47□□□□□ -0.25
SRSF4-201ENST00000373795 TMEM126AQ9H061 195 aa13.46□□□□□ -0.25
SRSF4-201ENST00000373795 LINC00846Q9NV44 126 aa13.46□□□□□ -0.25
SRSF4-201ENST00000373795 UNQ6190/PRO20217Q6UXQ8 127 aa13.46□□□□□ -0.25
SRSF4-201ENST00000373795 SPAG11BQ08648 103 aa13.45□□□□□ -0.26
SRSF4-201ENST00000373795 Q8N814 137 aa13.45□□□□□ -0.26
SRSF4-201ENST00000373795 LINC00167Q96N53 147 aa13.44□□□□□ -0.26
SRSF4-201ENST00000373795 C6orf99Q4VX62 202 aa13.42□□□□□ -0.26
SRSF4-201ENST00000373795 DNAH9Q9NYC9 4486 aa13.41□□□□□ -0.26
SRSF4-201ENST00000373795 TRAV10A0A0B4J240 114 aa13.41□□□□□ -0.26
SRSF4-201ENST00000373795 IGKV3D-7A0A0C4DH55 119 aa13.41□□□□□ -0.26
SRSF4-201ENST00000373795 KRTAP26-1Q6PEX3 210 aa13.4□□□□□ -0.26
SRSF4-201ENST00000373795 STAB2Q8WWQ8 2551 aa13.4□□□□□ -0.26
SRSF4-201ENST00000373795 A0A1B0GX51 115 aa13.4□□□□□ -0.26
SRSF4-201ENST00000373795 S100A7L2Q5SY68 101 aa13.39□□□□□ -0.27
SRSF4-201ENST00000373795 LYSTQ99698 3801 aa13.39□□□□□ -0.27
SRSF4-201ENST00000373795 LINC01556Q5JQF7 62 aa13.38□□□□□ -0.27
SRSF4-201ENST00000373795 HIGD2BQ4VC39 106 aa13.37□□□□□ -0.27
SRSF4-201ENST00000373795 TMEM256-PLSCR3K7ERE1 68 aa13.37□□□□□ -0.27
SRSF4-201ENST00000373795 CCKP06307 115 aa13.37□□□□□ -0.27
SRSF4-201ENST00000373795 LINC00588Q9Y4M8 146 aa13.36□□□□□ -0.27
SRSF4-201ENST00000373795 Q6JHZ5 121 aa13.35□□□□□ -0.27
SRSF4-201ENST00000373795 JMJD7-PLA2G4BH0Y9G9 81 aa13.34□□□□□ -0.27
SRSF4-201ENST00000373795 RPL18AQ02543 176 aaKnown RBP13.34□□□□□ -0.27
SRSF4-201ENST00000373795 IGKV2D-24A0A075B6R9 120 aa13.34□□□□□ -0.27
SRSF4-201ENST00000373795 LINC00575Q6W349 94 aa13.34□□□□□ -0.27
SRSF4-201ENST00000373795 C6orf48Q9UBA6 75 aa13.34□□□□□ -0.27
SRSF4-201ENST00000373795 HIST1H4AP62805 103 aaKnown RBP13.33□□□□□ -0.28
SRSF4-201ENST00000373795 C3orf22Q8N5N4 141 aa13.32□□□□□ -0.28
SRSF4-201ENST00000373795 C1orf43Q9BWL3 253 aa13.32□□□□□ -0.28
SRSF4-201ENST00000373795 ZNF561-AS1K7EIQ3 104 aa13.32□□□□□ -0.28
SRSF4-201ENST00000373795 A0A087WVE0 104 aa13.31□□□□□ -0.28
SRSF4-201ENST00000373795 DNAH10OSP0CZ25 163 aa13.31□□□□□ -0.28
SRSF4-201ENST00000373795 C15orf56Q8N910 161 aa13.31□□□□□ -0.28
SRSF4-201ENST00000373795 DNAH1Q9P2D7 4330 aa13.3□□□□□ -0.28
SRSF4-201ENST00000373795 XAGE1AQ9HD64 81 aa13.3□□□□□ -0.28
SRSF4-201ENST00000373795 UQCRQO14949 82 aa13.29□□□□□ -0.28
SRSF4-201ENST00000373795 IGLV6-57P01721 117 aa13.29□□□□□ -0.28
SRSF4-201ENST00000373795 C9orf153Q5TBE3 101 aa13.29□□□□□ -0.28
SRSF4-201ENST00000373795 hADV29S1A0JD25 119 aa13.28□□□□□ -0.28
SRSF4-201ENST00000373795 MUC7Q8TAX7 377 aa13.28□□□□□ -0.28
SRSF4-201ENST00000373795 CAMK2N2Q96S95 79 aa13.28□□□□□ -0.28
SRSF4-201ENST00000373795 GVQW2A0A096LPI5 108 aaPredicted RBP13.28□□□□□ -0.28
SRSF4-201ENST00000373795 C2orf48Q96LS8 159 aa13.27□□□□□ -0.29
SRSF4-201ENST00000373795 ATOX1O00244 68 aa13.26□□□□□ -0.29
SRSF4-201ENST00000373795 Q6ZRU5 148 aa13.26□□□□□ -0.29
SRSF4-201ENST00000373795 CSMD3Q7Z407 3707 aa13.26□□□□□ -0.29
SRSF4-201ENST00000373795 TRBV10-3A0A0K0K1G6 114 aa13.25□□□□□ -0.29
SRSF4-201ENST00000373795 COX7CP15954 63 aa13.25□□□□□ -0.29
SRSF4-201ENST00000373795 TENM2Q9NT68 2774 aa13.24□□□□□ -0.29
SRSF4-201ENST00000373795 SMIM20Q8N5G0 67 aa13.23□□□□□ -0.29
SRSF4-201ENST00000373795 Q6ZQY7 126 aa13.22□□□□□ -0.29
SRSF4-201ENST00000373795 LAMTOR3Q9UHA4 124 aa13.22□□□□□ -0.29
SRSF4-201ENST00000373795 RBM3P98179 157 aaKnown RBP13.21□□□□□ -0.29
SRSF4-201ENST00000373795 CASC10Q5T4H9 136 aa13.21□□□□□ -0.29
SRSF4-201ENST00000373795 TRAV23DV6A0A075B6W5 121 aa13.21□□□□□ -0.3
SRSF4-201ENST00000373795 DNAH10Q8IVF4 4471 aa13.2□□□□□ -0.3
SRSF4-201ENST00000373795 DNAH7Q8WXX0 4024 aa13.2□□□□□ -0.3
SRSF4-201ENST00000373795 USP17L23D6RBM5 183 aa13.19□□□□□ -0.3
SRSF4-201ENST00000373795 Q6ZQT0 140 aa13.19□□□□□ -0.3
SRSF4-201ENST00000373795 M0R2N4 97 aa13.18□□□□□ -0.3
SRSF4-201ENST00000373795 DIRC1Q969H9 104 aa13.18□□□□□ -0.3
SRSF4-201ENST00000373795 B9D2Q9BPU9 175 aa13.18□□□□□ -0.3
SRSF4-201ENST00000373795 DNHD1Q96M86 4753 aa13.17□□□□□ -0.3
SRSF4-201ENST00000373795 FAM19A1Q7Z5A9 133 aa13.16□□□□□ -0.3
SRSF4-201ENST00000373795 UBL5Q9BZL1 73 aa13.16□□□□□ -0.3
SRSF4-201ENST00000373795 PLECQ15149 4684 aaKnown RBP13.16□□□□□ -0.3
SRSF4-201ENST00000373795 ZNF73O43830 326 aaPredicted RBP13.16□□□□□ -0.3
SRSF4-201ENST00000373795 PRKDCP78527 4128 aaKnown RBP13.16□□□□□ -0.3
SRSF4-201ENST00000373795 DYNC2H1Q8NCM8 4307 aaKnown RBP13.15□□□□□ -0.3
SRSF4-201ENST00000373795 Q6ZRP5 223 aa13.15□□□□□ -0.3
SRSF4-201ENST00000373795 UPK3BQ9BT76 320 aa13.15□□□□□ -0.3
SRSF4-201ENST00000373795 LOC110117498A0A087WWA1 95 aa13.14□□□□□ -0.31
SRSF4-201ENST00000373795 NDUFC2-KCTD14E9PQ53 114 aa13.14□□□□□ -0.31
SRSF4-201ENST00000373795 CRYGAP11844 174 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms