RNA–Protein interactions for RNA: ENST00000373057.7

FOXP4-202, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-202ENST00000373057 SERP2Q8N6R1 65 aa12.89□□□□□ -0.35
FOXP4-202ENST00000373057 M0R2N4 97 aa12.89□□□□□ -0.35
FOXP4-202ENST00000373057 CCKP06307 115 aa12.89□□□□□ -0.35
FOXP4-202ENST00000373057 ZNF843Q8N446 348 aa12.89□□□□□ -0.35
FOXP4-202ENST00000373057 NANOS2P60321 138 aaKnown RBP12.88□□□□□ -0.35
FOXP4-202ENST00000373057 UBL5Q9BZL1 73 aa12.88□□□□□ -0.35
FOXP4-202ENST00000373057 KRTAP1-3Q8IUG1 177 aa12.87□□□□□ -0.35
FOXP4-202ENST00000373057 Q8IZM0 81 aa12.87□□□□□ -0.35
FOXP4-202ENST00000373057 BRK1Q8WUW1 75 aa12.87□□□□□ -0.35
FOXP4-202ENST00000373057 HIVEP1P15822 2718 aa12.87□□□□□ -0.35
FOXP4-202ENST00000373057 SPAG11BQ08648 103 aa12.87□□□□□ -0.35
FOXP4-202ENST00000373057 RPS28P62857 69 aaKnown RBP12.86□□□□□ -0.35
FOXP4-202ENST00000373057 TENM1Q9UKZ4 2725 aa12.86□□□□□ -0.35
FOXP4-202ENST00000373057 DAD1P61803 113 aa12.86□□□□□ -0.35
FOXP4-202ENST00000373057 UPK3BQ9BT76 320 aa12.86□□□□□ -0.35
FOXP4-202ENST00000373057 TMEM256-PLSCR3K7ERE1 68 aa12.85□□□□□ -0.35
FOXP4-202ENST00000373057 Q6ZQY7 126 aa12.85□□□□□ -0.35
FOXP4-202ENST00000373057 PRO0628Q9UI54 55 aa12.85□□□□□ -0.35
FOXP4-202ENST00000373057 CMC4P56277 68 aaPredicted RBP12.84□□□□□ -0.35
FOXP4-202ENST00000373057 HIGD2BQ4VC39 106 aa12.84□□□□□ -0.35
FOXP4-202ENST00000373057 OXTP01178 125 aa12.83□□□□□ -0.35
FOXP4-202ENST00000373057 CRYGAP11844 174 aa12.83□□□□□ -0.36
FOXP4-202ENST00000373057 JMJD7-PLA2G4BH0Y9G9 81 aa12.83□□□□□ -0.36
FOXP4-202ENST00000373057 RBM3P98179 157 aaKnown RBP12.83□□□□□ -0.36
FOXP4-202ENST00000373057 CD164L2Q6UWJ8 174 aa12.82□□□□□ -0.36
FOXP4-202ENST00000373057 CYSRT1A8MQ03 144 aa12.81□□□□□ -0.36
FOXP4-202ENST00000373057 SNURFQ9Y675 71 aa12.81□□□□□ -0.36
FOXP4-202ENST00000373057 PDZD2O15018 2839 aa12.81□□□□□ -0.36
FOXP4-202ENST00000373057 TRRAPQ9Y4A5 3859 aa12.8□□□□□ -0.36
FOXP4-202ENST00000373057 TMEM258P61165 79 aa12.8□□□□□ -0.36
FOXP4-202ENST00000373057 CELA1Q9UNI1 258 aa12.8□□□□□ -0.36
FOXP4-202ENST00000373057 X6R8D5 127 aa12.8□□□□□ -0.36
FOXP4-202ENST00000373057 KIAA0087Q14695 138 aa12.8□□□□□ -0.36
FOXP4-202ENST00000373057 C1orf195Q5TG92 126 aa12.79□□□□□ -0.36
FOXP4-202ENST00000373057 Q5XG85 94 aa12.78□□□□□ -0.36
FOXP4-202ENST00000373057 LY6G6DO95868 133 aa12.78□□□□□ -0.36
FOXP4-202ENST00000373057 OBSCN-AS1Q96MR7 158 aa12.78□□□□□ -0.36
FOXP4-202ENST00000373057 IGHV4-28A0A0C4DH34 117 aa12.77□□□□□ -0.36
FOXP4-202ENST00000373057 PKD1L1Q8TDX9 2849 aa12.77□□□□□ -0.37
FOXP4-202ENST00000373057 TRBV10-3A0A0K0K1G6 114 aa12.76□□□□□ -0.37
FOXP4-202ENST00000373057 A0A1B0GUV1 79 aa12.76□□□□□ -0.37
FOXP4-202ENST00000373057 LINC00575Q6W349 94 aa12.75□□□□□ -0.37
FOXP4-202ENST00000373057 OTOGQ6ZRI0 2925 aa12.74□□□□□ -0.37
FOXP4-202ENST00000373057 KRTAP10-3P60369 221 aa12.74□□□□□ -0.37
FOXP4-202ENST00000373057 Q8N9L7 120 aa12.72□□□□□ -0.37
FOXP4-202ENST00000373057 DEFB105AQ8NG35 78 aa12.72□□□□□ -0.37
FOXP4-202ENST00000373057 ANK3Q12955 4377 aaKnown RBP12.72□□□□□ -0.37
FOXP4-202ENST00000373057 TRAV10A0A0B4J240 114 aa12.72□□□□□ -0.37
FOXP4-202ENST00000373057 BAHCC1Q9P281 2608 aa12.69□□□□□ -0.38
FOXP4-202ENST00000373057 Q6ZVQ6 151 aa12.68□□□□□ -0.38
FOXP4-202ENST00000373057 LINC01547P58512 204 aaPredicted RBP12.68□□□□□ -0.38
FOXP4-202ENST00000373057 ZNF561-AS1K7EIQ3 104 aa12.68□□□□□ -0.38
FOXP4-202ENST00000373057 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.68□□□□□ -0.38
FOXP4-202ENST00000373057 RMI2Q96E14 147 aa12.67□□□□□ -0.38
FOXP4-202ENST00000373057 Q6ZQT0 140 aa12.67□□□□□ -0.38
FOXP4-202ENST00000373057 NOTCH1P46531 2555 aa12.67□□□□□ -0.38
FOXP4-202ENST00000373057 CAMK2N2Q96S95 79 aa12.67□□□□□ -0.38
FOXP4-202ENST00000373057 NDUFC2O95298 119 aa12.66□□□□□ -0.38
FOXP4-202ENST00000373057 DIRC1Q969H9 104 aa12.66□□□□□ -0.38
FOXP4-202ENST00000373057 KRTAP1-1Q07627 177 aa12.65□□□□□ -0.38
FOXP4-202ENST00000373057 COX17Q14061 63 aa12.65□□□□□ -0.38
FOXP4-202ENST00000373057 RETNQ9HD89 108 aa12.65□□□□□ -0.38
FOXP4-202ENST00000373057 C6orf48Q9UBA6 75 aa12.64□□□□□ -0.39
FOXP4-202ENST00000373057 C3orf84H3BNL1 204 aa12.64□□□□□ -0.39
FOXP4-202ENST00000373057 MAST4O15021 2626 aa12.62□□□□□ -0.39
FOXP4-202ENST00000373057 LYRM9A8MSI8 78 aa12.62□□□□□ -0.39
FOXP4-202ENST00000373057 ZNF73O43830 326 aaPredicted RBP12.62□□□□□ -0.39
FOXP4-202ENST00000373057 WFDC10BQ8IUB3 73 aa12.62□□□□□ -0.39
FOXP4-202ENST00000373057 COX7BP24311 80 aa12.61□□□□□ -0.39
FOXP4-202ENST00000373057 MPLKIPQ8TAP9 179 aa12.61□□□□□ -0.39
FOXP4-202ENST00000373057 SPART-AS1P0CW21 52 aa12.6□□□□□ -0.39
FOXP4-202ENST00000373057 LINC00167Q96N53 147 aa12.6□□□□□ -0.39
FOXP4-202ENST00000373057 FLNBO75369 2602 aaKnown RBP12.6□□□□□ -0.39
FOXP4-202ENST00000373057 MUC7Q8TAX7 377 aa12.6□□□□□ -0.39
FOXP4-202ENST00000373057 C16orf95Q9H693 158 aa12.6□□□□□ -0.39
FOXP4-202ENST00000373057 ATP5EP2Q5VTU8 51 aa12.59□□□□□ -0.39
FOXP4-202ENST00000373057 LINC00612Q8N6U2 182 aa12.59□□□□□ -0.39
FOXP4-202ENST00000373057 TM2D3Q9BRN9 247 aa12.59□□□□□ -0.39
FOXP4-202ENST00000373057 F8WEM9 126 aa12.58□□□□□ -0.4
FOXP4-202ENST00000373057 APOC4P55056 127 aa12.58□□□□□ -0.4
FOXP4-202ENST00000373057 NSD1Q96L73 2696 aaPredicted RBP12.57□□□□□ -0.4
FOXP4-202ENST00000373057 INAFM1C9JVW0 142 aa12.57□□□□□ -0.4
FOXP4-202ENST00000373057 IGKV2D-24A0A075B6R9 120 aa12.57□□□□□ -0.4
FOXP4-202ENST00000373057 LELP1Q5T871 98 aa12.56□□□□□ -0.4
FOXP4-202ENST00000373057 STAB1Q9NY15 2570 aa12.55□□□□□ -0.4
FOXP4-202ENST00000373057 Q6ZRU5 148 aa12.55□□□□□ -0.4
FOXP4-202ENST00000373057 IGLV6-57P01721 117 aa12.54□□□□□ -0.4
FOXP4-202ENST00000373057 C9orf66Q5T8R8 295 aa12.54□□□□□ -0.4
FOXP4-202ENST00000373057 BPY2O14599 106 aa12.52□□□□□ -0.4
FOXP4-202ENST00000373057 IGHV4-30-4P0DP06 118 aa12.52□□□□□ -0.4
FOXP4-202ENST00000373057 Q8NAQ8 132 aa12.52□□□□□ -0.41
FOXP4-202ENST00000373057 LINC00474Q9P2X8 69 aa12.52□□□□□ -0.41
FOXP4-202ENST00000373057 TENM3Q9P273 2699 aa12.52□□□□□ -0.41
FOXP4-202ENST00000373057 LYPD5Q6UWN5 251 aa12.52□□□□□ -0.41
FOXP4-202ENST00000373057 RPL37AP8A6NKH3 93 aa12.51□□□□□ -0.41
FOXP4-202ENST00000373057 NBEAL1Q6ZS30 2694 aa12.51□□□□□ -0.41
FOXP4-202ENST00000373057 TRAV7A0A075B6U4 112 aa12.5□□□□□ -0.41
FOXP4-202ENST00000373057 FBN1P35555 2871 aaKnown RBP12.5□□□□□ -0.41
FOXP4-202ENST00000373057 PRB2P02812 416 aaPredicted RBP12.5□□□□□ -0.41
FOXP4-202ENST00000373057 COL6A5A8TX70 2615 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms