RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 NCR3O14931 201 aa11.92□□□□□ -0.5
CTSA-204ENST00000372484 C15orf56Q8N910 161 aa11.92□□□□□ -0.5
CTSA-204ENST00000372484 CDIP1Q9H305 208 aa11.92□□□□□ -0.5
CTSA-204ENST00000372484 Q9HAA7 133 aa11.92□□□□□ -0.5
CTSA-204ENST00000372484 BAALC-AS2P0C853 105 aa11.91□□□□□ -0.5
CTSA-204ENST00000372484 DNAL4O96015 105 aa11.9□□□□□ -0.5
CTSA-204ENST00000372484 HUWE1Q7Z6Z7 4374 aaKnown RBP11.9□□□□□ -0.5
CTSA-204ENST00000372484 COL7A1Q02388 2944 aa11.89□□□□□ -0.51
CTSA-204ENST00000372484 S100A7L2Q5SY68 101 aa11.89□□□□□ -0.51
CTSA-204ENST00000372484 STAB2Q8WWQ8 2551 aa11.87□□□□□ -0.51
CTSA-204ENST00000372484 LECT2O14960 151 aa11.87□□□□□ -0.51
CTSA-204ENST00000372484 Q6ZRU5 148 aa11.87□□□□□ -0.51
CTSA-204ENST00000372484 C2orf48Q96LS8 159 aa11.87□□□□□ -0.51
CTSA-204ENST00000372484 XAGE1AQ9HD64 81 aa11.87□□□□□ -0.51
CTSA-204ENST00000372484 C21orf62-AS1Q17RA5 79 aa11.85□□□□□ -0.51
CTSA-204ENST00000372484 RPL18AQ02543 176 aaKnown RBP11.84□□□□□ -0.51
CTSA-204ENST00000372484 C22orf24Q9Y442 160 aa11.84□□□□□ -0.51
CTSA-204ENST00000372484 C6orf99Q4VX62 202 aa11.82□□□□□ -0.52
CTSA-204ENST00000372484 XGP55808 180 aa11.81□□□□□ -0.52
CTSA-204ENST00000372484 NDUFC2-KCTD14E9PQ53 114 aa11.81□□□□□ -0.52
CTSA-204ENST00000372484 F8WDY8 70 aa11.81□□□□□ -0.52
CTSA-204ENST00000372484 IGLV6-57P01721 117 aa11.8□□□□□ -0.52
CTSA-204ENST00000372484 UPK3BQ9BT76 320 aa11.8□□□□□ -0.52
CTSA-204ENST00000372484 SLPIP03973 132 aa11.8□□□□□ -0.52
CTSA-204ENST00000372484 SYCNQ0VAF6 134 aa11.8□□□□□ -0.52
CTSA-204ENST00000372484 MT-ATP8P03928 68 aa11.79□□□□□ -0.52
CTSA-204ENST00000372484 A0A1B0GX51 115 aa11.78□□□□□ -0.52
CTSA-204ENST00000372484 GAGE2EQ4V326 116 aa11.78□□□□□ -0.52
CTSA-204ENST00000372484 Q8N814 137 aa11.78□□□□□ -0.52
CTSA-204ENST00000372484 GAGE2DQ9UEU5 116 aa11.78□□□□□ -0.52
CTSA-204ENST00000372484 B9D2Q9BPU9 175 aa11.78□□□□□ -0.52
CTSA-204ENST00000372484 ORMDL1Q9P0S3 153 aa11.78□□□□□ -0.52
CTSA-204ENST00000372484 FAM240AA0A1B0GVK7 77 aa11.77□□□□□ -0.52
CTSA-204ENST00000372484 RMI2Q96E14 147 aa11.77□□□□□ -0.52
CTSA-204ENST00000372484 TRBV10-3A0A0K0K1G6 114 aa11.77□□□□□ -0.53
CTSA-204ENST00000372484 Q6ZRP5 223 aa11.76□□□□□ -0.53
CTSA-204ENST00000372484 INAFM2P0DMQ5 153 aa11.75□□□□□ -0.53
CTSA-204ENST00000372484 VPREB1P12018 145 aa11.75□□□□□ -0.53
CTSA-204ENST00000372484 USP17L23D6RBM5 183 aa11.75□□□□□ -0.53
CTSA-204ENST00000372484 SNCGO76070 127 aa11.75□□□□□ -0.53
CTSA-204ENST00000372484 SCGB1A1P11684 91 aa11.75□□□□□ -0.53
CTSA-204ENST00000372484 CASC10Q5T4H9 136 aa11.75□□□□□ -0.53
CTSA-204ENST00000372484 LINC00167Q96N53 147 aa11.75□□□□□ -0.53
CTSA-204ENST00000372484 TRAV23DV6A0A075B6W5 121 aa11.74□□□□□ -0.53
CTSA-204ENST00000372484 LINC00575Q6W349 94 aa11.73□□□□□ -0.53
CTSA-204ENST00000372484 C9orf129Q5T035 196 aaKnown RBP11.72□□□□□ -0.53
CTSA-204ENST00000372484 M0R378 163 aa11.71□□□□□ -0.53
CTSA-204ENST00000372484 ACYP1P07311 99 aa11.71□□□□□ -0.54
CTSA-204ENST00000372484 DNAH9Q9NYC9 4486 aa11.7□□□□□ -0.54
CTSA-204ENST00000372484 DIRC1Q969H9 104 aa11.7□□□□□ -0.54
CTSA-204ENST00000372484 hADV29S1A0JD25 119 aa11.69□□□□□ -0.54
CTSA-204ENST00000372484 OBSCN-AS1Q96MR7 158 aa11.69□□□□□ -0.54
CTSA-204ENST00000372484 TMEM256-PLSCR3K7ERE1 68 aa11.69□□□□□ -0.54
CTSA-204ENST00000372484 ZNF73O43830 326 aaPredicted RBP11.69□□□□□ -0.54
CTSA-204ENST00000372484 C14orf132Q9NPU4 83 aa11.69□□□□□ -0.54
CTSA-204ENST00000372484 APLNQ9ULZ1 77 aa11.69□□□□□ -0.54
CTSA-204ENST00000372484 UBE2DNLQ8IWF7 75 aa11.68□□□□□ -0.54
CTSA-204ENST00000372484 GAGE2AQ6NT46 116 aa11.68□□□□□ -0.54
CTSA-204ENST00000372484 TLX1NBP0CAT3 122 aa11.67□□□□□ -0.54
CTSA-204ENST00000372484 LYSTQ99698 3801 aa11.67□□□□□ -0.54
CTSA-204ENST00000372484 A0A1B0GV72 72 aa11.66□□□□□ -0.54
CTSA-204ENST00000372484 KRTAP1-5Q9BYS1 174 aa11.66□□□□□ -0.54
CTSA-204ENST00000372484 TTC32Q5I0X7 151 aa11.65□□□□□ -0.54
CTSA-204ENST00000372484 DNAH1Q9P2D7 4330 aa11.65□□□□□ -0.55
CTSA-204ENST00000372484 TENM2Q9NT68 2774 aa11.64□□□□□ -0.55
CTSA-204ENST00000372484 COX7BP24311 80 aa11.64□□□□□ -0.55
CTSA-204ENST00000372484 NKAPP1Q8N9T2 125 aa11.64□□□□□ -0.55
CTSA-204ENST00000372484 NHLRC4P0CG21 123 aaPredicted RBP11.63□□□□□ -0.55
CTSA-204ENST00000372484 SERTAD4-AS1Q5TG53 156 aa11.63□□□□□ -0.55
CTSA-204ENST00000372484 TRBV7-6A0A0J9YX20 115 aa11.62□□□□□ -0.55
CTSA-204ENST00000372484 JMJD7-PLA2G4BH0Y9G9 81 aa11.62□□□□□ -0.55
CTSA-204ENST00000372484 ELOF1P60002 83 aaKnown RBP11.62□□□□□ -0.55
CTSA-204ENST00000372484 Q6ZQY7 126 aa11.61□□□□□ -0.55
CTSA-204ENST00000372484 CSMD3Q7Z407 3707 aa11.61□□□□□ -0.55
CTSA-204ENST00000372484 GAGE2BQ13066 116 aa11.6□□□□□ -0.55
CTSA-204ENST00000372484 PSCAO43653 123 aa11.59□□□□□ -0.55
CTSA-204ENST00000372484 SMCR5Q8TEV8 140 aa11.59□□□□□ -0.55
CTSA-204ENST00000372484 NUPR2A6NF83 97 aa11.59□□□□□ -0.55
CTSA-204ENST00000372484 PLA2G2DQ9UNK4 145 aa11.59□□□□□ -0.55
CTSA-204ENST00000372484 C7orf33Q8WU49 177 aa11.58□□□□□ -0.56
CTSA-204ENST00000372484 FAM168BA1KXE4 195 aa11.57□□□□□ -0.56
CTSA-204ENST00000372484 SDIM1Q6ZPB5 146 aa11.57□□□□□ -0.56
CTSA-204ENST00000372484 LOC107984640A0A0U1RRK4 108 aa11.56□□□□□ -0.56
CTSA-204ENST00000372484 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.56□□□□□ -0.56
CTSA-204ENST00000372484 LINC00643Q86TS7 51 aa11.56□□□□□ -0.56
CTSA-204ENST00000372484 LINC00528Q8N1L1 170 aa11.56□□□□□ -0.56
CTSA-204ENST00000372484 KCNQ1DNQ9H478 68 aa11.56□□□□□ -0.56
CTSA-204ENST00000372484 LAMTOR3Q9UHA4 124 aa11.56□□□□□ -0.56
CTSA-204ENST00000372484 H3BQ85 93 aa11.55□□□□□ -0.56
CTSA-204ENST00000372484 CCKP06307 115 aa11.54□□□□□ -0.56
CTSA-204ENST00000372484 Q6Q795 121 aa11.54□□□□□ -0.56
CTSA-204ENST00000372484 DYNC2H1Q8NCM8 4307 aaKnown RBP11.53□□□□□ -0.56
CTSA-204ENST00000372484 IGLV5-37A0A075B6J1 123 aa11.53□□□□□ -0.56
CTSA-204ENST00000372484 RBM3P98179 157 aaKnown RBP11.53□□□□□ -0.56
CTSA-204ENST00000372484 MEGF8Q7Z7M0 2845 aa11.52□□□□□ -0.56
CTSA-204ENST00000372484 RPL37AP8A6NKH3 93 aa11.52□□□□□ -0.57
CTSA-204ENST00000372484 DNAH7Q8WXX0 4024 aa11.52□□□□□ -0.57
CTSA-204ENST00000372484 GHRHP01286 108 aa11.51□□□□□ -0.57
CTSA-204ENST00000372484 LINC00846Q9NV44 126 aa11.51□□□□□ -0.57
CTSA-204ENST00000372484 TRBV7-7A0A0K0K1E9 115 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms