RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 RPL28P46779 137 aaKnown RBP16.64■□□□□ 0.25
CTSA-203ENST00000372459 C15orf56Q8N910 161 aa16.64■□□□□ 0.25
CTSA-203ENST00000372459 Q9HAA7 133 aa16.64■□□□□ 0.25
CTSA-203ENST00000372459 NDUFC2O95298 119 aa16.64■□□□□ 0.25
CTSA-203ENST00000372459 Q6Q795 121 aa16.63■□□□□ 0.25
CTSA-203ENST00000372459 C6orf48Q9UBA6 75 aa16.63■□□□□ 0.25
CTSA-203ENST00000372459 CAMK2N2Q96S95 79 aa16.62■□□□□ 0.25
CTSA-203ENST00000372459 NHLRC4P0CG21 123 aaPredicted RBP16.62■□□□□ 0.25
CTSA-203ENST00000372459 OR13C6PQ8NH95 151 aa16.61■□□□□ 0.25
CTSA-203ENST00000372459 C2orf48Q96LS8 159 aa16.6■□□□□ 0.25
CTSA-203ENST00000372459 GAGE2BQ13066 116 aa16.6■□□□□ 0.25
CTSA-203ENST00000372459 GAGE2EQ4V326 116 aa16.6■□□□□ 0.25
CTSA-203ENST00000372459 GAGE2DQ9UEU5 116 aa16.6■□□□□ 0.25
CTSA-203ENST00000372459 SMIM11BQ8TCY0 68 aa16.59■□□□□ 0.25
CTSA-203ENST00000372459 COL7A1Q02388 2944 aa16.57■□□□□ 0.24
CTSA-203ENST00000372459 F8WDY8 70 aa16.57■□□□□ 0.24
CTSA-203ENST00000372459 RMI2Q96E14 147 aa16.57■□□□□ 0.24
CTSA-203ENST00000372459 FAM218AQ96MZ4 157 aa16.57■□□□□ 0.24
CTSA-203ENST00000372459 ACYP1P07311 99 aa16.55■□□□□ 0.24
CTSA-203ENST00000372459 Q6ZRU5 148 aa16.55■□□□□ 0.24
CTSA-203ENST00000372459 PRR3P79522 188 aaKnown RBP16.54■□□□□ 0.24
CTSA-203ENST00000372459 BAALC-AS2P0C853 105 aa16.53■□□□□ 0.24
CTSA-203ENST00000372459 ANAPC13Q9BS18 74 aa16.53■□□□□ 0.24
CTSA-203ENST00000372459 APLNQ9ULZ1 77 aa16.53■□□□□ 0.24
CTSA-203ENST00000372459 STAB2Q8WWQ8 2551 aa16.52■□□□□ 0.24
CTSA-203ENST00000372459 TMEM126AQ9H061 195 aa16.51■□□□□ 0.23
CTSA-203ENST00000372459 Q8NDZ9 215 aa16.5■□□□□ 0.23
CTSA-203ENST00000372459 H0YGX0 51 aa16.49■□□□□ 0.23
CTSA-203ENST00000372459 NCR3O14931 201 aa16.49■□□□□ 0.23
CTSA-203ENST00000372459 C22orf24Q9Y442 160 aa16.49■□□□□ 0.23
CTSA-203ENST00000372459 TTC32Q5I0X7 151 aa16.49■□□□□ 0.23
CTSA-203ENST00000372459 NDUFV3P56181 108 aaKnown RBP16.48■□□□□ 0.23
CTSA-203ENST00000372459 UBE2DNLQ8IWF7 75 aa16.48■□□□□ 0.23
CTSA-203ENST00000372459 SYCNQ0VAF6 134 aa16.47■□□□□ 0.23
CTSA-203ENST00000372459 NDUFC2-KCTD14E9PQ53 114 aa16.46■□□□□ 0.23
CTSA-203ENST00000372459 XAGE1AQ9HD64 81 aa16.46■□□□□ 0.23
CTSA-203ENST00000372459 DNAH1Q9P2D7 4330 aa16.46■□□□□ 0.23
CTSA-203ENST00000372459 NUPR2A6NF83 97 aa16.46■□□□□ 0.22
CTSA-203ENST00000372459 INAFM2P0DMQ5 153 aa16.46■□□□□ 0.22
CTSA-203ENST00000372459 S100A7L2Q5SY68 101 aa16.46■□□□□ 0.22
CTSA-203ENST00000372459 TRBV7-7A0A0K0K1E9 115 aa16.45■□□□□ 0.22
CTSA-203ENST00000372459 USP17L23D6RBM5 183 aa16.44■□□□□ 0.22
CTSA-203ENST00000372459 DYNC2H1Q8NCM8 4307 aaKnown RBP16.44■□□□□ 0.22
CTSA-203ENST00000372459 DNAL4O96015 105 aa16.43■□□□□ 0.22
CTSA-203ENST00000372459 CASC10Q5T4H9 136 aa16.43■□□□□ 0.22
CTSA-203ENST00000372459 DNHD1Q96M86 4753 aa16.41■□□□□ 0.22
CTSA-203ENST00000372459 A0A087WYN8 130 aa16.41■□□□□ 0.22
CTSA-203ENST00000372459 RPL18AQ02543 176 aaKnown RBP16.4■□□□□ 0.22
CTSA-203ENST00000372459 SDIM1Q6ZPB5 146 aa16.39■□□□□ 0.21
CTSA-203ENST00000372459 Q6ZRP5 223 aa16.38■□□□□ 0.21
CTSA-203ENST00000372459 IMUPQ9GZP8 106 aa16.38■□□□□ 0.21
CTSA-203ENST00000372459 IGLV6-57P01721 117 aa16.37■□□□□ 0.21
CTSA-203ENST00000372459 KRTAP1-5Q9BYS1 174 aa16.37■□□□□ 0.21
CTSA-203ENST00000372459 LINC00643Q86TS7 51 aa16.37■□□□□ 0.21
CTSA-203ENST00000372459 VPREB1P12018 145 aa16.35■□□□□ 0.21
CTSA-203ENST00000372459 LECT2O14960 151 aa16.34■□□□□ 0.21
CTSA-203ENST00000372459 SMCR5Q8TEV8 140 aa16.34■□□□□ 0.21
CTSA-203ENST00000372459 SLPIP03973 132 aa16.33■□□□□ 0.21
CTSA-203ENST00000372459 TLX1NBP0CAT3 122 aa16.33■□□□□ 0.21
CTSA-203ENST00000372459 C6orf99Q4VX62 202 aa16.33■□□□□ 0.21
CTSA-203ENST00000372459 OBSCN-AS1Q96MR7 158 aa16.33■□□□□ 0.2
CTSA-203ENST00000372459 LYSTQ99698 3801 aa16.32■□□□□ 0.2
CTSA-203ENST00000372459 PRKDCP78527 4128 aaKnown RBP16.32■□□□□ 0.2
CTSA-203ENST00000372459 A0A1B0GX51 115 aa16.31■□□□□ 0.2
CTSA-203ENST00000372459 KRTAP21-3Q3LHN1 58 aa16.31■□□□□ 0.2
CTSA-203ENST00000372459 TRBV10-3A0A0K0K1G6 114 aa16.3■□□□□ 0.2
CTSA-203ENST00000372459 CSMD3Q7Z407 3707 aa16.3■□□□□ 0.2
CTSA-203ENST00000372459 M0R378 163 aa16.29■□□□□ 0.2
CTSA-203ENST00000372459 C9orf129Q5T035 196 aaKnown RBP16.29■□□□□ 0.2
CTSA-203ENST00000372459 PLECQ15149 4684 aaKnown RBP16.28■□□□□ 0.2
CTSA-203ENST00000372459 PSCAO43653 123 aa16.28■□□□□ 0.2
CTSA-203ENST00000372459 GAGE2AQ6NT46 116 aa16.28■□□□□ 0.2
CTSA-203ENST00000372459 LINC00167Q96N53 147 aa16.27■□□□□ 0.2
CTSA-203ENST00000372459 TRAV23DV6A0A075B6W5 121 aa16.27■□□□□ 0.19
CTSA-203ENST00000372459 ORMDL1Q9P0S3 153 aa16.26■□□□□ 0.19
CTSA-203ENST00000372459 Q8N814 137 aa16.25■□□□□ 0.19
CTSA-203ENST00000372459 DNAH7Q8WXX0 4024 aa16.23■□□□□ 0.19
CTSA-203ENST00000372459 NBDYA0A0U1RRE5 68 aa16.22■□□□□ 0.19
CTSA-203ENST00000372459 DIRC1Q969H9 104 aa16.22■□□□□ 0.19
CTSA-203ENST00000372459 MEGF8Q7Z7M0 2845 aa16.22■□□□□ 0.19
CTSA-203ENST00000372459 C14orf132Q9NPU4 83 aa16.22■□□□□ 0.19
CTSA-203ENST00000372459 CCDC179H3BU77 68 aa16.21■□□□□ 0.19
CTSA-203ENST00000372459 LINC00575Q6W349 94 aa16.21■□□□□ 0.19
CTSA-203ENST00000372459 PLA2G2DQ9UNK4 145 aa16.2■□□□□ 0.18
CTSA-203ENST00000372459 ZNF73O43830 326 aaPredicted RBP16.2■□□□□ 0.18
CTSA-203ENST00000372459 NKAPP1Q8N9T2 125 aa16.2■□□□□ 0.18
CTSA-203ENST00000372459 LOC107984640A0A0U1RRK4 108 aa16.19■□□□□ 0.18
CTSA-203ENST00000372459 FAM236AA0A1B0GUQ0 79 aa16.18■□□□□ 0.18
CTSA-203ENST00000372459 FAM236BA0A1B0GV22 79 aa16.18■□□□□ 0.18
CTSA-203ENST00000372459 B5MCH6 92 aa16.18■□□□□ 0.18
CTSA-203ENST00000372459 C14orf177Q52M58 125 aa16.17■□□□□ 0.18
CTSA-203ENST00000372459 SERTAD4-AS1Q5TG53 156 aa16.17■□□□□ 0.18
CTSA-203ENST00000372459 STARD9Q9P2P6 4700 aa16.17■□□□□ 0.18
CTSA-203ENST00000372459 hADV29S1A0JD25 119 aa16.16■□□□□ 0.18
CTSA-203ENST00000372459 DNAH10Q8IVF4 4471 aa16.15■□□□□ 0.18
CTSA-203ENST00000372459 TRBV7-6A0A0J9YX20 115 aa16.15■□□□□ 0.18
CTSA-203ENST00000372459 CNBPP62633 177 aaKnown RBP16.15■□□□□ 0.18
CTSA-203ENST00000372459 COX7BP24311 80 aa16.13■□□□□ 0.17
CTSA-203ENST00000372459 JMJD7-PLA2G4BH0Y9G9 81 aa16.13■□□□□ 0.17
CTSA-203ENST00000372459 IGLV5-37A0A075B6J1 123 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms