RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 PRO0628Q9UI54 55 aa16.4■□□□□ 0.22
RAPGEF1-203ENST00000372195 FSHBP01225 129 aa16.4■□□□□ 0.22
RAPGEF1-203ENST00000372195 ELOF1P60002 83 aaKnown RBP16.38■□□□□ 0.21
RAPGEF1-203ENST00000372195 Q6ZQT0 140 aa16.37■□□□□ 0.21
RAPGEF1-203ENST00000372195 LIMD2Q9BT23 127 aa16.37■□□□□ 0.21
RAPGEF1-203ENST00000372195 IGLV5-45A0A087WSX0 123 aa16.36■□□□□ 0.21
RAPGEF1-203ENST00000372195 A0A1B0GU69 56 aa16.36■□□□□ 0.21
RAPGEF1-203ENST00000372195 TM2D3Q9BRN9 247 aa16.36■□□□□ 0.21
RAPGEF1-203ENST00000372195 CENPFP49454 3210 aa16.34■□□□□ 0.21
RAPGEF1-203ENST00000372195 LINC00476Q8WZB0 136 aa16.33■□□□□ 0.21
RAPGEF1-203ENST00000372195 NCOR2Q9Y618 2525 aa16.33■□□□□ 0.2
RAPGEF1-203ENST00000372195 COL4A2P08572 1712 aa16.33■□□□□ 0.2
RAPGEF1-203ENST00000372195 IGLV8-61A0A075B6I0 122 aa16.3■□□□□ 0.2
RAPGEF1-203ENST00000372195 FAM168BA1KXE4 195 aa16.28■□□□□ 0.2
RAPGEF1-203ENST00000372195 EPM2AB3EWF7 344 aa16.27■□□□□ 0.19
RAPGEF1-203ENST00000372195 MUC4Q99102 2169 aa16.26■□□□□ 0.19
RAPGEF1-203ENST00000372195 Q6ZRX8 168 aa16.25■□□□□ 0.19
RAPGEF1-203ENST00000372195 ACYP2P14621 99 aa16.22■□□□□ 0.19
RAPGEF1-203ENST00000372195 MYO18BQ8IUG5 2567 aa16.21■□□□□ 0.19
RAPGEF1-203ENST00000372195 LITAFQ99732 161 aa16.21■□□□□ 0.19
RAPGEF1-203ENST00000372195 LOC110117498A0A087WWA1 95 aa16.2■□□□□ 0.18
RAPGEF1-203ENST00000372195 Q6ZRP5 223 aa16.2■□□□□ 0.18
RAPGEF1-203ENST00000372195 LINC00588Q9Y4M8 146 aa16.2■□□□□ 0.18
RAPGEF1-203ENST00000372195 NHLRC4P0CG21 123 aaPredicted RBP16.2■□□□□ 0.18
RAPGEF1-203ENST00000372195 RTL8CO15255 209 aa16.19■□□□□ 0.18
RAPGEF1-203ENST00000372195 Q8NAQ8 132 aa16.17■□□□□ 0.18
RAPGEF1-203ENST00000372195 Q8NBF4 154 aa16.17■□□□□ 0.18
RAPGEF1-203ENST00000372195 TP53AIP1Q9HCN2 124 aa16.16■□□□□ 0.18
RAPGEF1-203ENST00000372195 KRTAP24-1Q3LI83 254 aa16.15■□□□□ 0.18
RAPGEF1-203ENST00000372195 SERTAD4-AS1Q5TG53 156 aa16.15■□□□□ 0.18
RAPGEF1-203ENST00000372195 LINC00313P59037 77 aa16.14■□□□□ 0.17
RAPGEF1-203ENST00000372195 PCSK5Q92824 1860 aa16.14■□□□□ 0.17
RAPGEF1-203ENST00000372195 RPS28P62857 69 aaKnown RBP16.14■□□□□ 0.17
RAPGEF1-203ENST00000372195 C16orf90A8MZG2 172 aa16.11■□□□□ 0.17
RAPGEF1-203ENST00000372195 BCE1O60756 84 aa16.09■□□□□ 0.17
RAPGEF1-203ENST00000372195 ATP11AUNQ6ZP68 121 aa16.09■□□□□ 0.17
RAPGEF1-203ENST00000372195 EIF4EBP3O60516 100 aaPredicted RBP16.09■□□□□ 0.17
RAPGEF1-203ENST00000372195 K7EQZ3 153 aa16.08■□□□□ 0.16
RAPGEF1-203ENST00000372195 H3BNG1 76 aa16.08■□□□□ 0.16
RAPGEF1-203ENST00000372195 TRAV22A0A0B4J277 110 aa16.07■□□□□ 0.16
RAPGEF1-203ENST00000372195 NBDYA0A0U1RRE5 68 aa16.06■□□□□ 0.16
RAPGEF1-203ENST00000372195 TYMSOSQ8TAI1 123 aa16.06■□□□□ 0.16
RAPGEF1-203ENST00000372195 Q96NJ1 140 aa16.06■□□□□ 0.16
RAPGEF1-203ENST00000372195 TRBV7-4A0A0J9YYF1 115 aa16.05■□□□□ 0.16
RAPGEF1-203ENST00000372195 MYO9AB2RTY4 2548 aa16.05■□□□□ 0.16
RAPGEF1-203ENST00000372195 GVQW2A0A096LPI5 108 aaPredicted RBP16.04■□□□□ 0.16
RAPGEF1-203ENST00000372195 VPREB1P12018 145 aa16.04■□□□□ 0.16
RAPGEF1-203ENST00000372195 IGLV6-57P01721 117 aa16.03■□□□□ 0.16
RAPGEF1-203ENST00000372195 TLN1Q9Y490 2541 aaKnown RBP16.02■□□□□ 0.16
RAPGEF1-203ENST00000372195 FN1P02751 2386 aaKnown RBP16.01■□□□□ 0.15
RAPGEF1-203ENST00000372195 A0A0G2JQZ4 141 aa16.01■□□□□ 0.15
RAPGEF1-203ENST00000372195 A0A1W2PNN7 141 aa16.01■□□□□ 0.15
RAPGEF1-203ENST00000372195 DOPEY1Q5JWR5 2465 aa15.99■□□□□ 0.15
RAPGEF1-203ENST00000372195 A8MUN3 132 aa15.99■□□□□ 0.15
RAPGEF1-203ENST00000372195 LRRK2Q5S007 2527 aa15.96■□□□□ 0.15
RAPGEF1-203ENST00000372195 PLA2G1BP04054 148 aaKnown RBP15.96■□□□□ 0.14
RAPGEF1-203ENST00000372195 SPINT4Q6UDR6 99 aa15.94■□□□□ 0.14
RAPGEF1-203ENST00000372195 COA5Q86WW8 74 aa15.94■□□□□ 0.14
RAPGEF1-203ENST00000372195 H3BPC8 53 aa15.93■□□□□ 0.14
RAPGEF1-203ENST00000372195 ABCA12Q86UK0 2595 aa15.93■□□□□ 0.14
RAPGEF1-203ENST00000372195 DNAH10OSP0CZ25 163 aa15.93■□□□□ 0.14
RAPGEF1-203ENST00000372195 C8orf87E5RJ46 101 aa15.93■□□□□ 0.14
RAPGEF1-203ENST00000372195 JMJD1CQ15652 2540 aa15.92■□□□□ 0.14
RAPGEF1-203ENST00000372195 A0A1B0GW54 56 aa15.92■□□□□ 0.14
RAPGEF1-203ENST00000372195 IGLV1-50A0A075B6I6 118 aa15.91■□□□□ 0.14
RAPGEF1-203ENST00000372195 A8MWP4 228 aa15.91■□□□□ 0.14
RAPGEF1-203ENST00000372195 CSNK1G2-AS1Q8NCQ2 148 aa15.91■□□□□ 0.14
RAPGEF1-203ENST00000372195 KRTAP10-11P60412 298 aa15.88■□□□□ 0.13
RAPGEF1-203ENST00000372195 DSCR10P59022 87 aa15.87■□□□□ 0.13
RAPGEF1-203ENST00000372195 IGFL1Q6UW32 110 aa15.86■□□□□ 0.13
RAPGEF1-203ENST00000372195 FAM229AH3BQW9 127 aa15.84■□□□□ 0.13
RAPGEF1-203ENST00000372195 TLN2Q9Y4G6 2542 aa15.84■□□□□ 0.13
RAPGEF1-203ENST00000372195 MRPL34Q9BQ48 92 aaKnown RBP15.83■□□□□ 0.13
RAPGEF1-203ENST00000372195 SSBP3-AS1Q7Z2R9 100 aa15.82■□□□□ 0.12
RAPGEF1-203ENST00000372195 C15orf56Q8N910 161 aa15.81■□□□□ 0.12
RAPGEF1-203ENST00000372195 KLK9Q2XQG4 91 aa15.81■□□□□ 0.12
RAPGEF1-203ENST00000372195 C9orf129Q5T035 196 aaKnown RBP15.81■□□□□ 0.12
RAPGEF1-203ENST00000372195 LINC01600Q96MT4 127 aa15.8■□□□□ 0.12
RAPGEF1-203ENST00000372195 DNAH12Q6ZR08 3092 aa15.79■□□□□ 0.12
RAPGEF1-203ENST00000372195 KCNQ1DNQ9H478 68 aa15.79■□□□□ 0.12
RAPGEF1-203ENST00000372195 ANAPC11Q9NYG5 84 aa15.79■□□□□ 0.12
RAPGEF1-203ENST00000372195 LINC00528Q8N1L1 170 aa15.79■□□□□ 0.12
RAPGEF1-203ENST00000372195 KRTAP10-3P60369 221 aa15.78■□□□□ 0.12
RAPGEF1-203ENST00000372195 LOC101927531A0A1B0GV80 90 aa15.76■□□□□ 0.11
RAPGEF1-203ENST00000372195 C9orf92A6NGG3 77 aa15.76■□□□□ 0.11
RAPGEF1-203ENST00000372195 Q8N377 158 aa15.75■□□□□ 0.11
RAPGEF1-203ENST00000372195 UTRNP46939 3433 aa15.75■□□□□ 0.11
RAPGEF1-203ENST00000372195 USP9XQ93008 2570 aaPredicted RBP15.75■□□□□ 0.11
RAPGEF1-203ENST00000372195 ZFYVE26Q68DK2 2539 aa15.73■□□□□ 0.11
RAPGEF1-203ENST00000372195 GIG44P09565 113 aaPredicted RBP15.72■□□□□ 0.11
RAPGEF1-203ENST00000372195 SETD2Q9BYW2 2564 aaPredicted RBP15.72■□□□□ 0.11
RAPGEF1-203ENST00000372195 ERC2-IT1O76042 136 aa15.71■□□□□ 0.11
RAPGEF1-203ENST00000372195 LINC00336Q6ZUF6 198 aa15.7■□□□□ 0.1
RAPGEF1-203ENST00000372195 OBSCN-AS1Q96MR7 158 aa15.7■□□□□ 0.1
RAPGEF1-203ENST00000372195 PIEZO1Q92508 2521 aa15.69■□□□□ 0.1
RAPGEF1-203ENST00000372195 C8orf17Q9NRJ1 99 aa15.69■□□□□ 0.1
RAPGEF1-203ENST00000372195 K7EIL1 84 aa15.67■□□□□ 0.1
RAPGEF1-203ENST00000372195 APLNQ9ULZ1 77 aa15.66■□□□□ 0.1
RAPGEF1-203ENST00000372195 ANKRD11Q6UB99 2663 aaPredicted RBP15.66■□□□□ 0.1
RAPGEF1-203ENST00000372195 PRR15Q8IV56 129 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms